RNA–Protein interactions for RNA: ENST00000288976.3

PTPDC1-201, Transcript of protein tyrosine phosphatase domain containing 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PTPDC1, Length 4,398 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1-201ENST00000288976 TAS2R10Q9NYW0 307 aa7.63□□□□□ -1.19
PTPDC1-201ENST00000288976 NUP214P35658 2090 aaPredicted RBP7.62□□□□□ -1.19
PTPDC1-201ENST00000288976 TRAV17A0A0B4J275 112 aa7.62□□□□□ -1.19
PTPDC1-201ENST00000288976 LRRC3CA6NJW4 275 aa7.62□□□□□ -1.19
PTPDC1-201ENST00000288976 MRPL3P09001 348 aaKnown RBP7.62□□□□□ -1.19
PTPDC1-201ENST00000288976 NR2C1P13056 603 aa7.62□□□□□ -1.19
PTPDC1-201ENST00000288976 TNFSF10P50591 281 aa7.62□□□□□ -1.19
PTPDC1-201ENST00000288976 CRYZQ08257 329 aaKnown RBP7.62□□□□□ -1.19
PTPDC1-201ENST00000288976 DAG1Q14118 895 aa7.62□□□□□ -1.19
PTPDC1-201ENST00000288976 PLGLAQ15195 96 aa7.62□□□□□ -1.19
PTPDC1-201ENST00000288976 PYDC2Q56P42 97 aa7.62□□□□□ -1.19
PTPDC1-201ENST00000288976 KDM4DQ6B0I6 523 aa7.62□□□□□ -1.19
PTPDC1-201ENST00000288976 ZNF627Q7L945 461 aa7.62□□□□□ -1.19
PTPDC1-201ENST00000288976 MDGA2Q7Z553 956 aa7.62□□□□□ -1.19
PTPDC1-201ENST00000288976 MEIOBQ8N635 442 aa7.62□□□□□ -1.19
PTPDC1-201ENST00000288976 CLDN22Q8N7P3 220 aa7.62□□□□□ -1.19
PTPDC1-201ENST00000288976 GNPDA2Q8TDQ7 276 aa7.62□□□□□ -1.19
PTPDC1-201ENST00000288976 SLC25A43Q8WUT9 341 aaPredicted RBP7.62□□□□□ -1.19
PTPDC1-201ENST00000288976 NRG4Q8WWG1 115 aa7.62□□□□□ -1.19
PTPDC1-201ENST00000288976 CHCHD6Q9BRQ6 235 aa7.62□□□□□ -1.19
PTPDC1-201ENST00000288976 GABARAPL3Q9BY60 117 aa7.62□□□□□ -1.19
PTPDC1-201ENST00000288976 DSN1Q9H410 356 aa7.62□□□□□ -1.19
PTPDC1-201ENST00000288976 GALNT9Q9HCQ5 603 aa7.62□□□□□ -1.19
PTPDC1-201ENST00000288976 ZFP64Q9NPA5 681 aa7.62□□□□□ -1.19
PTPDC1-201ENST00000288976 NANSQ9NR45 359 aa7.62□□□□□ -1.19
PTPDC1-201ENST00000288976 ABCB10Q9NRK6 738 aa7.62□□□□□ -1.19
PTPDC1-201ENST00000288976 MED17Q9NVC6 651 aa7.62□□□□□ -1.19
PTPDC1-201ENST00000288976 RAXQ9Y2V3 346 aa7.62□□□□□ -1.19
PTPDC1-201ENST00000288976 IGHV3-64DA0A0J9YX35 117 aa7.62□□□□□ -1.19
PTPDC1-201ENST00000288976 A0A1B0GW55 424 aa7.62□□□□□ -1.19
PTPDC1-201ENST00000288976 E9PQ18 207 aa7.62□□□□□ -1.19
PTPDC1-201ENST00000288976 H3BUI4 141 aa7.62□□□□□ -1.19
PTPDC1-201ENST00000288976 SSNA1O43805 119 aa7.62□□□□□ -1.19
PTPDC1-201ENST00000288976 IGHV3-9P01782 118 aa7.62□□□□□ -1.19
PTPDC1-201ENST00000288976 DUX4L2P0CJ85 424 aa7.62□□□□□ -1.19
PTPDC1-201ENST00000288976 DUX4L3P0CJ86 424 aa7.62□□□□□ -1.19
PTPDC1-201ENST00000288976 DUX4L4P0CJ87 422 aa7.62□□□□□ -1.19
PTPDC1-201ENST00000288976 DUX4L5P0CJ88 424 aa7.62□□□□□ -1.19
PTPDC1-201ENST00000288976 DUX4L6P0CJ89 424 aa7.62□□□□□ -1.19
PTPDC1-201ENST00000288976 DUX4L7P0CJ90 424 aa7.62□□□□□ -1.19
PTPDC1-201ENST00000288976 POU3F2P20265 443 aaPredicted RBP7.62□□□□□ -1.19
PTPDC1-201ENST00000288976 CFL1P23528 166 aaKnown RBP7.62□□□□□ -1.19
PTPDC1-201ENST00000288976 NAA10P41227 235 aaPredicted RBP7.62□□□□□ -1.19
PTPDC1-201ENST00000288976 PIN1Q13526 163 aaPredicted RBP7.62□□□□□ -1.19
PTPDC1-201ENST00000288976 KCTD21Q4G0X4 260 aa7.62□□□□□ -1.19
PTPDC1-201ENST00000288976 ZNF766Q5HY98 468 aa7.62□□□□□ -1.19
PTPDC1-201ENST00000288976 ALG10BQ5I7T1 473 aa7.62□□□□□ -1.19
PTPDC1-201ENST00000288976 LPCAT4Q643R3 524 aa7.62□□□□□ -1.19
PTPDC1-201ENST00000288976 DESI1Q6ICB0 168 aa7.62□□□□□ -1.19
PTPDC1-201ENST00000288976 CBLN3Q6UW01 205 aa7.62□□□□□ -1.19
PTPDC1-201ENST00000288976 OR10G2Q8NGC3 310 aa7.62□□□□□ -1.19
PTPDC1-201ENST00000288976 NINJ1Q92982 152 aa7.62□□□□□ -1.19
PTPDC1-201ENST00000288976 SH3GL3Q99963 347 aa7.62□□□□□ -1.19
PTPDC1-201ENST00000288976 UBQLN3Q9H347 655 aa7.62□□□□□ -1.19
PTPDC1-201ENST00000288976 DUX4Q9UBX2 424 aa7.62□□□□□ -1.19
PTPDC1-201ENST00000288976 OAZ3Q9UMX2 235 aa7.62□□□□□ -1.19
PTPDC1-201ENST00000288976 HIVEP3Q5T1R4 2406 aa7.62□□□□□ -1.19
PTPDC1-201ENST00000288976 TRBV4-1A0A0J9YWV2 114 aa7.62□□□□□ -1.19
PTPDC1-201ENST00000288976 C2orf72A6NCS6 295 aa7.62□□□□□ -1.19
PTPDC1-201ENST00000288976 GGT3PA6NGU5 568 aa7.62□□□□□ -1.19
PTPDC1-201ENST00000288976 SULT2B1O00204 365 aa7.62□□□□□ -1.19
PTPDC1-201ENST00000288976 KLF4O43474 513 aa7.62□□□□□ -1.19
PTPDC1-201ENST00000288976 FRS3O43559 492 aa7.62□□□□□ -1.19
PTPDC1-201ENST00000288976 ADAM11O75078 769 aa7.62□□□□□ -1.19
PTPDC1-201ENST00000288976 ALPLP05186 524 aa7.62□□□□□ -1.19
PTPDC1-201ENST00000288976 FPR3P25089 353 aa7.62□□□□□ -1.19
PTPDC1-201ENST00000288976 FOXK2Q01167 660 aa7.62□□□□□ -1.19
PTPDC1-201ENST00000288976 SLC3A1Q07837 685 aa7.62□□□□□ -1.19
PTPDC1-201ENST00000288976 FOXO1Q12778 655 aa7.62□□□□□ -1.19
PTPDC1-201ENST00000288976 QPRTQ15274 297 aa7.62□□□□□ -1.19
PTPDC1-201ENST00000288976 ATAD3CQ5T2N8 411 aa7.62□□□□□ -1.19
PTPDC1-201ENST00000288976 RPL13AP3Q6NVV1 102 aa7.62□□□□□ -1.19
PTPDC1-201ENST00000288976 ASB18Q6ZVZ8 466 aa7.62□□□□□ -1.19
PTPDC1-201ENST00000288976 TSPYL5Q86VY4 417 aaPredicted RBP7.62□□□□□ -1.19
PTPDC1-201ENST00000288976 TIGD4Q8IY51 512 aa7.62□□□□□ -1.19
PTPDC1-201ENST00000288976 PRR18Q8N4B5 295 aa7.62□□□□□ -1.19
PTPDC1-201ENST00000288976 AMER2Q8N7J2 671 aa7.62□□□□□ -1.19
PTPDC1-201ENST00000288976 MYDGFQ969H8 173 aa7.62□□□□□ -1.19
PTPDC1-201ENST00000288976 SIGLEC12Q96PQ1 595 aa7.62□□□□□ -1.19
PTPDC1-201ENST00000288976 PRORYQ9H606 182 aa7.62□□□□□ -1.19
PTPDC1-201ENST00000288976 ZNF703Q9H7S9 590 aaPredicted RBP7.62□□□□□ -1.19
PTPDC1-201ENST00000288976 CCNB1IP1Q9NPC3 277 aa7.62□□□□□ -1.19
PTPDC1-201ENST00000288976 EIF3KQ9UBQ5 218 aaKnown RBP7.62□□□□□ -1.19
PTPDC1-201ENST00000288976 TNRC6AQ8NDV7 1962 aaKnown RBP7.62□□□□□ -1.19
PTPDC1-201ENST00000288976 MPDZO75970 2070 aa7.62□□□□□ -1.19
PTPDC1-201ENST00000288976 WDFY3Q8IZQ1 3526 aa7.62□□□□□ -1.19
PTPDC1-201ENST00000288976 FAM171A2A8MVW0 826 aa7.62□□□□□ -1.19
PTPDC1-201ENST00000288976 F5H5K5 113 aa7.62□□□□□ -1.19
PTPDC1-201ENST00000288976 J3QLW9 94 aa7.62□□□□□ -1.19
PTPDC1-201ENST00000288976 MPPED1O15442 326 aa7.62□□□□□ -1.19
PTPDC1-201ENST00000288976 KDM4BO94953 1096 aa7.62□□□□□ -1.19
PTPDC1-201ENST00000288976 ZNF19P17023 458 aa7.62□□□□□ -1.19
PTPDC1-201ENST00000288976 MST1P26927 711 aa7.62□□□□□ -1.19
PTPDC1-201ENST00000288976 PEX2P28328 305 aa7.62□□□□□ -1.19
PTPDC1-201ENST00000288976 GCH1P30793 250 aa7.62□□□□□ -1.19
PTPDC1-201ENST00000288976 CAPGP40121 348 aa7.62□□□□□ -1.19
PTPDC1-201ENST00000288976 SELENBP1Q13228 472 aa7.62□□□□□ -1.19
PTPDC1-201ENST00000288976 NKPD1Q17RQ9 610 aa7.62□□□□□ -1.19
PTPDC1-201ENST00000288976 CMPK2Q5EBM0 449 aa7.62□□□□□ -1.19
PTPDC1-201ENST00000288976 PODNL1Q6PEZ8 512 aa7.62□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms