RNA–Protein interactions for RNA: ENST00000264883.7

NUP54-201, Transcript of nucleoporin 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP54, Length 2,367 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-201ENST00000264883 ADGRL4Q9HBW9 690 aa12.01□□□□□ -0.49
NUP54-201ENST00000264883 MRPS30Q9NP92 439 aaKnown RBP12.01□□□□□ -0.49
NUP54-201ENST00000264883 POT1Q9NUX5 634 aa12.01□□□□□ -0.49
NUP54-201ENST00000264883 GPR55Q9Y2T6 319 aaPredicted RBP12.01□□□□□ -0.49
NUP54-201ENST00000264883 ZBTB32Q9Y2Y4 487 aaPredicted RBP12.01□□□□□ -0.49
NUP54-201ENST00000264883 NOTCH4Q99466 2003 aa12.01□□□□□ -0.49
NUP54-201ENST00000264883 A0A1W2PRU2 124 aa12.01□□□□□ -0.49
NUP54-201ENST00000264883 ARGFXA6NJG6 315 aa12.01□□□□□ -0.49
NUP54-201ENST00000264883 GRXCR1A8MXD5 290 aa12.01□□□□□ -0.49
NUP54-201ENST00000264883 OGG1O15527 345 aa12.01□□□□□ -0.49
NUP54-201ENST00000264883 EMC8O43402 210 aa12.01□□□□□ -0.49
NUP54-201ENST00000264883 HMGN2P05204 90 aaKnown RBP12.01□□□□□ -0.49
NUP54-201ENST00000264883 CD63P08962 238 aa12.01□□□□□ -0.49
NUP54-201ENST00000264883 ZGLP1P0C6A0 271 aa12.01□□□□□ -0.49
NUP54-201ENST00000264883 OR8U8P0C7N1 319 aa12.01□□□□□ -0.49
NUP54-201ENST00000264883 CD79AP11912 226 aa12.01□□□□□ -0.49
NUP54-201ENST00000264883 SLC25A4P12235 298 aa12.01□□□□□ -0.49
NUP54-201ENST00000264883 MPIP34949 423 aa12.01□□□□□ -0.49
NUP54-201ENST00000264883 CCR2P41597 374 aa12.01□□□□□ -0.49
NUP54-201ENST00000264883 RPS11P62280 158 aaKnown RBP eCLIP12.01□□□□□ -0.49
NUP54-201ENST00000264883 EEF1A1P68104 462 aaKnown RBP12.01□□□□□ -0.49
NUP54-201ENST00000264883 TGM3Q08188 693 aa12.01□□□□□ -0.49
NUP54-201ENST00000264883 ATXN7L3Q14CW9 347 aaPredicted RBP12.01□□□□□ -0.49
NUP54-201ENST00000264883 LRRC37A5PQ49AS3 106 aa12.01□□□□□ -0.49
NUP54-201ENST00000264883 STPG1Q5TH74 334 aa12.01□□□□□ -0.49
NUP54-201ENST00000264883 EEF1A1P5Q5VTE0 462 aa12.01□□□□□ -0.49
NUP54-201ENST00000264883 SSX6Q7RTT6 188 aa12.01□□□□□ -0.49
NUP54-201ENST00000264883 ZNF547Q8IVP9 402 aa12.01□□□□□ -0.49
NUP54-201ENST00000264883 OR5K2Q8NHB8 316 aa12.01□□□□□ -0.49
NUP54-201ENST00000264883 TMEM255BQ8WV15 326 aa12.01□□□□□ -0.49
NUP54-201ENST00000264883 SLC39A7Q92504 469 aa12.01□□□□□ -0.49
NUP54-201ENST00000264883 HAVCR1Q96D42 359 aa12.01□□□□□ -0.49
NUP54-201ENST00000264883 GAL3ST1Q99999 423 aa12.01□□□□□ -0.49
NUP54-201ENST00000264883 GGACTQ9BVM4 153 aa12.01□□□□□ -0.49
NUP54-201ENST00000264883 C1QTNF2Q9BXJ5 285 aa12.01□□□□□ -0.49
NUP54-201ENST00000264883 CCDC86Q9H6F5 360 aaKnown RBP12.01□□□□□ -0.49
NUP54-201ENST00000264883 ACKR4Q9NPB9 350 aa12.01□□□□□ -0.49
NUP54-201ENST00000264883 NOX4Q9NPH5 578 aa12.01□□□□□ -0.49
NUP54-201ENST00000264883 MMP26Q9NRE1 261 aa12.01□□□□□ -0.49
NUP54-201ENST00000264883 CCL16O15467 120 aa12□□□□□ -0.49
NUP54-201ENST00000264883 FGF19O95750 216 aa12□□□□□ -0.49
NUP54-201ENST00000264883 AGR2O95994 175 aa12□□□□□ -0.49
NUP54-201ENST00000264883 IGHV2-5P01817 119 aa12□□□□□ -0.49
NUP54-201ENST00000264883 PRNPP04156 253 aa12□□□□□ -0.49
NUP54-201ENST00000264883 NQO2P16083 231 aa12□□□□□ -0.49
NUP54-201ENST00000264883 RCC1P18754 421 aaPredicted RBP12□□□□□ -0.49
NUP54-201ENST00000264883 CERS1P27544 350 aa12□□□□□ -0.49
NUP54-201ENST00000264883 RAB2AP61019 212 aa12□□□□□ -0.49
NUP54-201ENST00000264883 LASP1Q14847 261 aaKnown RBP12□□□□□ -0.49
NUP54-201ENST00000264883 SLC9A5Q14940 896 aa12□□□□□ -0.49
NUP54-201ENST00000264883 CDK5R1Q15078 307 aa12□□□□□ -0.49
NUP54-201ENST00000264883 GFOD2Q3B7J2 385 aa12□□□□□ -0.49
NUP54-201ENST00000264883 FAM76BQ5HYJ3 339 aa12□□□□□ -0.49
NUP54-201ENST00000264883 UNQ6126/PRO20091Q6UXV3 157 aa12□□□□□ -0.49
NUP54-201ENST00000264883 SSX9Q7RTT3 188 aa12□□□□□ -0.49
NUP54-201ENST00000264883 UBE3DQ7Z6J8 389 aa12□□□□□ -0.49
NUP54-201ENST00000264883 LRRTM1Q86UE6 522 aa12□□□□□ -0.49
NUP54-201ENST00000264883 PARGQ86W56 976 aa12□□□□□ -0.49
NUP54-201ENST00000264883 LMNTD1Q8N9Z9 388 aa12□□□□□ -0.49
NUP54-201ENST00000264883 OR52L1Q8NGH7 329 aa12□□□□□ -0.49
NUP54-201ENST00000264883 OR51S1Q8NGJ8 323 aa12□□□□□ -0.49
NUP54-201ENST00000264883 OR5AR1Q8NGP9 310 aa12□□□□□ -0.49
NUP54-201ENST00000264883 TFGQ92734 400 aaPredicted RBP12□□□□□ -0.49
NUP54-201ENST00000264883 OTUB2Q96DC9 234 aa12□□□□□ -0.49
NUP54-201ENST00000264883 NRIP2Q9BQI9 281 aa12□□□□□ -0.49
NUP54-201ENST00000264883 NAA11Q9BSU3 229 aaPredicted RBP12□□□□□ -0.49
NUP54-201ENST00000264883 OR52D1Q9H346 318 aa12□□□□□ -0.49
NUP54-201ENST00000264883 HCFC1R1Q9NWW0 138 aa12□□□□□ -0.49
NUP54-201ENST00000264883 RCC2Q9P258 522 aaKnown RBP12□□□□□ -0.49
NUP54-201ENST00000264883 OR5V1Q9UGF6 321 aa12□□□□□ -0.49
NUP54-201ENST00000264883 NTNG1Q9Y2I2 539 aa12□□□□□ -0.49
NUP54-201ENST00000264883 GGT3PA6NGU5 568 aa12□□□□□ -0.49
NUP54-201ENST00000264883 MAGEB4O15481 346 aaPredicted RBP12□□□□□ -0.49
NUP54-201ENST00000264883 TMEM127O75204 238 aa12□□□□□ -0.49
NUP54-201ENST00000264883 CA3P07451 260 aa12□□□□□ -0.49
NUP54-201ENST00000264883 CSF1P09603 554 aa12□□□□□ -0.49
NUP54-201ENST00000264883 CASRP41180 1078 aa12□□□□□ -0.49
NUP54-201ENST00000264883 RGS8P57771 180 aaPredicted RBP12□□□□□ -0.49
NUP54-201ENST00000264883 ZNF234Q14588 700 aa12□□□□□ -0.49
NUP54-201ENST00000264883 PON3Q15166 354 aa12□□□□□ -0.49
NUP54-201ENST00000264883 TMEM215Q68D42 235 aa12□□□□□ -0.49
NUP54-201ENST00000264883 SLC29A4Q7RTT9 530 aa12□□□□□ -0.49
NUP54-201ENST00000264883 RNF113BQ8IZP6 322 aaKnown RBP12□□□□□ -0.49
NUP54-201ENST00000264883 LNX2Q8N448 690 aa12□□□□□ -0.49
NUP54-201ENST00000264883 SLC41A3Q96GZ6 507 aa12□□□□□ -0.49
NUP54-201ENST00000264883 CLCC1Q96S66 551 aa12□□□□□ -0.49
NUP54-201ENST00000264883 POFUT1Q9H488 388 aa12□□□□□ -0.49
NUP54-201ENST00000264883 MEPEQ9NQ76 525 aaPredicted RBP12□□□□□ -0.49
NUP54-201ENST00000264883 TRBV2A0A0J9YWF9 115 aa11.99□□□□□ -0.49
NUP54-201ENST00000264883 H7C417 338 aa11.99□□□□□ -0.49
NUP54-201ENST00000264883 OR1F1O43749 312 aa11.99□□□□□ -0.49
NUP54-201ENST00000264883 MOSPD3O75425 235 aa11.99□□□□□ -0.49
NUP54-201ENST00000264883 PMS2P2O95744 297 aa11.99□□□□□ -0.49
NUP54-201ENST00000264883 EPCAMP16422 314 aa11.99□□□□□ -0.49
NUP54-201ENST00000264883 CSNK2A2P19784 350 aaPredicted RBP11.99□□□□□ -0.49
NUP54-201ENST00000264883 RIDAP52758 137 aaKnown RBP11.99□□□□□ -0.49
NUP54-201ENST00000264883 PRKAG1P54619 331 aa11.99□□□□□ -0.49
NUP54-201ENST00000264883 ACTC1P68032 377 aa11.99□□□□□ -0.49
NUP54-201ENST00000264883 ACTA1P68133 377 aa11.99□□□□□ -0.49
NUP54-201ENST00000264883 AKIRIN2Q53H80 203 aa11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms