RNA–Protein interactions for RNA: ENST00000243326.9

RIF1-201, Transcript of replication timing regulatory factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RIF1, Length 15,003 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-201ENST00000243326 AVL9Q8NBF6 648 aa6.97□□□□□ -1.29
RIF1-201ENST00000243326 ZNF461Q8TAF7 563 aa6.97□□□□□ -1.29
RIF1-201ENST00000243326 CAPNS2Q96L46 248 aa6.97□□□□□ -1.29
RIF1-201ENST00000243326 SORCS2Q96PQ0 1159 aa6.97□□□□□ -1.29
RIF1-201ENST00000243326 PCYT1BQ9Y5K3 369 aaPredicted RBP6.97□□□□□ -1.29
RIF1-201ENST00000243326 TEX51A0A1B0GUA7 166 aa6.97□□□□□ -1.29
RIF1-201ENST00000243326 HMGB3O15347 200 aaKnown RBP6.97□□□□□ -1.29
RIF1-201ENST00000243326 FABP5Q01469 135 aa6.97□□□□□ -1.29
RIF1-201ENST00000243326 BPHLQ86WA6 291 aaPredicted RBP6.97□□□□□ -1.29
RIF1-201ENST00000243326 CMTM4Q8IZR5 234 aa6.97□□□□□ -1.29
RIF1-201ENST00000243326 WBP2Q969T9 261 aa6.97□□□□□ -1.29
RIF1-201ENST00000243326 ZNF487B1APH4 448 aa6.97□□□□□ -1.29
RIF1-201ENST00000243326 CLDN10P78369 228 aa6.97□□□□□ -1.29
RIF1-201ENST00000243326 OXA1LQ15070 435 aa6.97□□□□□ -1.29
RIF1-201ENST00000243326 ZFP62Q8NB50 900 aaPredicted RBP6.97□□□□□ -1.29
RIF1-201ENST00000243326 CXorf58Q96LI9 332 aa6.97□□□□□ -1.29
RIF1-201ENST00000243326 TSSK2Q96PF2 358 aa6.97□□□□□ -1.29
RIF1-201ENST00000243326 SLC22A12Q96S37 553 aa6.97□□□□□ -1.29
RIF1-201ENST00000243326 MYNNQ9NPC7 610 aa6.97□□□□□ -1.29
RIF1-201ENST00000243326 IL17CQ9P0M4 197 aa6.97□□□□□ -1.29
RIF1-201ENST00000243326 SPG11Q96JI7 2443 aa6.97□□□□□ -1.29
RIF1-201ENST00000243326 PSMB1P20618 241 aaKnown RBP6.97□□□□□ -1.29
RIF1-201ENST00000243326 EIF4HQ15056 248 aaKnown RBP6.97□□□□□ -1.29
RIF1-201ENST00000243326 TPGS2Q68CL5 300 aa6.97□□□□□ -1.29
RIF1-201ENST00000243326 KDM4DQ6B0I6 523 aa6.97□□□□□ -1.29
RIF1-201ENST00000243326 PGAP1Q75T13 922 aa6.97□□□□□ -1.29
RIF1-201ENST00000243326 LRRC28Q86X40 367 aaPredicted RBP6.97□□□□□ -1.29
RIF1-201ENST00000243326 TAS2R4Q9NYW5 299 aa6.97□□□□□ -1.29
RIF1-201ENST00000243326 CEBPZOSA8MTT3 80 aa6.97□□□□□ -1.29
RIF1-201ENST00000243326 IFNL1Q8IU54 200 aa6.97□□□□□ -1.29
RIF1-201ENST00000243326 MS4A15Q8N5U1 240 aa6.97□□□□□ -1.29
RIF1-201ENST00000243326 SFXN5Q8TD22 340 aa6.97□□□□□ -1.29
RIF1-201ENST00000243326 MAGT1Q9H0U3 335 aa6.97□□□□□ -1.29
RIF1-201ENST00000243326 FN3KRPQ9HA64 309 aa6.97□□□□□ -1.29
RIF1-201ENST00000243326 HTRA4P83105 476 aaPredicted RBP6.96□□□□□ -1.29
RIF1-201ENST00000243326 CST6Q15828 149 aa6.96□□□□□ -1.29
RIF1-201ENST00000243326 PLEKHN1Q494U1 663 aaPredicted RBP6.96□□□□□ -1.29
RIF1-201ENST00000243326 BAGE3Q86Y29 109 aa6.96□□□□□ -1.29
RIF1-201ENST00000243326 BAGE2Q86Y30 109 aa6.96□□□□□ -1.29
RIF1-201ENST00000243326 OR11A1Q9GZK7 315 aa6.96□□□□□ -1.29
RIF1-201ENST00000243326 ACOXLQ9NUZ1 547 aa6.96□□□□□ -1.29
RIF1-201ENST00000243326 MDFIC2A0A1B0GVS7 189 aa6.96□□□□□ -1.29
RIF1-201ENST00000243326 TGM5O43548 720 aa6.96□□□□□ -1.29
RIF1-201ENST00000243326 CEBPBP17676 345 aa6.96□□□□□ -1.29
RIF1-201ENST00000243326 RAB3AP20336 220 aa6.96□□□□□ -1.29
RIF1-201ENST00000243326 S100A11P31949 105 aa6.96□□□□□ -1.29
RIF1-201ENST00000243326 GPLD1P80108 840 aa6.96□□□□□ -1.29
RIF1-201ENST00000243326 OR2W5A6NFC9 320 aa6.96□□□□□ -1.29
RIF1-201ENST00000243326 IGHV3-9P01782 118 aa6.96□□□□□ -1.29
RIF1-201ENST00000243326 STEAP1BQ6NZ63 245 aa6.96□□□□□ -1.29
RIF1-201ENST00000243326 FBXW5Q969U6 566 aa6.96□□□□□ -1.29
RIF1-201ENST00000243326 ALG12Q9BV10 488 aa6.96□□□□□ -1.29
RIF1-201ENST00000243326 TAS2R8Q9NYW2 309 aa6.96□□□□□ -1.29
RIF1-201ENST00000243326 PRSS44E7EML9 344 aa6.96□□□□□ -1.29
RIF1-201ENST00000243326 K7ESM1 405 aa6.96□□□□□ -1.29
RIF1-201ENST00000243326 OR8G2PQ6IF36 304 aa6.96□□□□□ -1.29
RIF1-201ENST00000243326 YIPF6Q96EC8 236 aa6.96□□□□□ -1.29
RIF1-201ENST00000243326 C12orf10Q9HB07 376 aa6.96□□□□□ -1.29
RIF1-201ENST00000243326 CRLF2Q9HC73 371 aa6.96□□□□□ -1.29
RIF1-201ENST00000243326 TCRBV5S2A0A599 114 aa6.96□□□□□ -1.3
RIF1-201ENST00000243326 PDCD1Q15116 288 aa6.96□□□□□ -1.3
RIF1-201ENST00000243326 KCTD11Q693B1 232 aa6.96□□□□□ -1.3
RIF1-201ENST00000243326 UBALD1Q8TB05 177 aa6.96□□□□□ -1.3
RIF1-201ENST00000243326 SLC22A18Q96BI1 424 aa6.96□□□□□ -1.3
RIF1-201ENST00000243326 OPALINQ96PE5 141 aa6.96□□□□□ -1.3
RIF1-201ENST00000243326 C11orf84Q9BUA3 381 aaPredicted RBP6.96□□□□□ -1.3
RIF1-201ENST00000243326 ZNF385DQ9H6B1 395 aa6.96□□□□□ -1.3
RIF1-201ENST00000243326 SETD1AO15047 1707 aaKnown RBP6.96□□□□□ -1.3
RIF1-201ENST00000243326 PGCP20142 388 aa6.96□□□□□ -1.3
RIF1-201ENST00000243326 BSCL2Q96G97 398 aaPredicted RBP6.96□□□□□ -1.3
RIF1-201ENST00000243326 C1QTNF2Q9BXJ5 285 aa6.96□□□□□ -1.3
RIF1-201ENST00000243326 SLC25A37Q9NYZ2 338 aa6.96□□□□□ -1.3
RIF1-201ENST00000243326 BACE2Q9Y5Z0 518 aa6.96□□□□□ -1.3
RIF1-201ENST00000243326 TCRBV16S1A1N1A0A5B0 115 aa6.96□□□□□ -1.3
RIF1-201ENST00000243326 ONECUT3O60422 494 aaPredicted RBP6.96□□□□□ -1.3
RIF1-201ENST00000243326 SOCS5O75159 536 aa6.96□□□□□ -1.3
RIF1-201ENST00000243326 GIPRP48546 466 aa6.96□□□□□ -1.3
RIF1-201ENST00000243326 ZNF100Q8IYN0 542 aa6.96□□□□□ -1.3
RIF1-201ENST00000243326 PSD2Q9BQI7 771 aa6.96□□□□□ -1.3
RIF1-201ENST00000243326 TIAM2Q8IVF5 1701 aa6.96□□□□□ -1.3
RIF1-201ENST00000243326 IGHV3-20A0A0C4DH32 117 aa6.96□□□□□ -1.3
RIF1-201ENST00000243326 HMGCLP35914 325 aa6.96□□□□□ -1.3
RIF1-201ENST00000243326 MMP12P39900 470 aa6.96□□□□□ -1.3
RIF1-201ENST00000243326 PER3P56645 1201 aa6.96□□□□□ -1.3
RIF1-201ENST00000243326 KCNC3Q14003 757 aa6.96□□□□□ -1.3
RIF1-201ENST00000243326 MBOAT2Q6ZWT7 520 aa6.96□□□□□ -1.3
RIF1-201ENST00000243326 DCTDP32321 178 aa6.96□□□□□ -1.3
RIF1-201ENST00000243326 PRSS12P56730 875 aa6.96□□□□□ -1.3
RIF1-201ENST00000243326 RPL19P84098 196 aaKnown RBP6.96□□□□□ -1.3
RIF1-201ENST00000243326 NHLRC1Q6VVB1 395 aa6.96□□□□□ -1.3
RIF1-201ENST00000243326 MAMDC2Q7Z304 686 aaPredicted RBP6.96□□□□□ -1.3
RIF1-201ENST00000243326 KLHDC7BQ96G42 594 aa6.96□□□□□ -1.3
RIF1-201ENST00000243326 TRIB3Q96RU7 358 aa6.96□□□□□ -1.3
RIF1-201ENST00000243326 ZNF33AQ06730 810 aa6.96□□□□□ -1.3
RIF1-201ENST00000243326 TMEM71Q6P5X7 295 aa6.96□□□□□ -1.3
RIF1-201ENST00000243326 PLK3Q9H4B4 646 aa6.96□□□□□ -1.3
RIF1-201ENST00000243326 ZSCAN4Q8NAM6 433 aaPredicted RBP6.96□□□□□ -1.3
RIF1-201ENST00000243326 INSM2Q96T92 566 aaPredicted RBP6.96□□□□□ -1.3
RIF1-201ENST00000243326 SLC43A1O75387 559 aa6.96□□□□□ -1.3
RIF1-201ENST00000243326 NDUFS1P28331 727 aa6.96□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms