RNA–Protein interactions for RNA: ENST00000238112.7

CPSF3-201, Transcript of cleavage and polyadenylation specific factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPSF3, Length 2,345 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF3-201ENST00000238112 MARVELD3Q96A59 401 aa17.05■□□□□ 0.32
CPSF3-201ENST00000238112 MIB2Q96AX9 1013 aa17.05■□□□□ 0.32
CPSF3-201ENST00000238112 CHIAQ9BZP6 476 aa17.05■□□□□ 0.32
CPSF3-201ENST00000238112 SRA1Q9HD15 236 aaKnown RBP17.05■□□□□ 0.32
CPSF3-201ENST00000238112 FRRS1LQ9P0K9 344 aa17.05■□□□□ 0.32
CPSF3-201ENST00000238112 PRODH2Q9UF12 536 aa17.05■□□□□ 0.32
CPSF3-201ENST00000238112 IKZF2Q9UKS7 526 aa17.05■□□□□ 0.32
CPSF3-201ENST00000238112 AUP1Q9Y679 476 aa17.05■□□□□ 0.32
CPSF3-201ENST00000238112 XIRP2A4UGR9 3374 aa17.05■□□□□ 0.32
CPSF3-201ENST00000238112 ZSCAN5BA6NJL1 495 aa17.04■□□□□ 0.32
CPSF3-201ENST00000238112 SRPX2O60687 465 aaPredicted RBP17.04■□□□□ 0.32
CPSF3-201ENST00000238112 MPC2O95563 127 aa17.04■□□□□ 0.32
CPSF3-201ENST00000238112 F13BP05160 661 aa17.04■□□□□ 0.32
CPSF3-201ENST00000238112 UBL4AP11441 157 aa17.04■□□□□ 0.32
CPSF3-201ENST00000238112 DRD1P21728 446 aa17.04■□□□□ 0.32
CPSF3-201ENST00000238112 TSPAN5P62079 268 aa17.04■□□□□ 0.32
CPSF3-201ENST00000238112 HYAL1Q12794 435 aa17.04■□□□□ 0.32
CPSF3-201ENST00000238112 LRRN1Q6UXK5 716 aa17.04■□□□□ 0.32
CPSF3-201ENST00000238112 PARGQ86W56 976 aa17.04■□□□□ 0.32
CPSF3-201ENST00000238112 TMPRSS12Q86WS5 348 aa17.04■□□□□ 0.32
CPSF3-201ENST00000238112 CEP76Q8TAP6 659 aa17.04■□□□□ 0.32
CPSF3-201ENST00000238112 LMF1Q96S06 567 aa17.04■□□□□ 0.32
CPSF3-201ENST00000238112 SEC22CQ9BRL7 303 aa17.04■□□□□ 0.32
CPSF3-201ENST00000238112 MGAT4CQ9UBM8 478 aa17.04■□□□□ 0.32
CPSF3-201ENST00000238112 GRHPRQ9UBQ7 328 aa17.04■□□□□ 0.32
CPSF3-201ENST00000238112 LAMP5Q9UJQ1 280 aa17.04■□□□□ 0.32
CPSF3-201ENST00000238112 CLDN16Q9Y5I7 305 aa17.04■□□□□ 0.32
CPSF3-201ENST00000238112 PIAS3Q9Y6X2 628 aa17.04■□□□□ 0.32
CPSF3-201ENST00000238112 EPOPA6NHQ4 379 aa17.04■□□□□ 0.32
CPSF3-201ENST00000238112 ANXA2P2A6NMY6 339 aa17.04■□□□□ 0.32
CPSF3-201ENST00000238112 B4DGG1 531 aa17.04■□□□□ 0.32
CPSF3-201ENST00000238112 SHOXO15266 292 aa17.04■□□□□ 0.32
CPSF3-201ENST00000238112 IGF2P01344 180 aa17.04■□□□□ 0.32
CPSF3-201ENST00000238112 ANXA2P07355 339 aaKnown RBP17.04■□□□□ 0.32
CPSF3-201ENST00000238112 PTHLHP12272 177 aa17.04■□□□□ 0.32
CPSF3-201ENST00000238112 RAD52P43351 418 aa17.04■□□□□ 0.32
CPSF3-201ENST00000238112 CD226Q15762 336 aa17.04■□□□□ 0.32
CPSF3-201ENST00000238112 STPG1Q5TH74 334 aa17.04■□□□□ 0.32
CPSF3-201ENST00000238112 SEZ6L2Q6UXD5 910 aa17.04■□□□□ 0.32
CPSF3-201ENST00000238112 GLDNQ6ZMI3 551 aaPredicted RBP17.04■□□□□ 0.32
CPSF3-201ENST00000238112 MED25Q71SY5 747 aa17.04■□□□□ 0.32
CPSF3-201ENST00000238112 DND1Q8IYX4 353 aaKnown RBP17.04■□□□□ 0.32
CPSF3-201ENST00000238112 MEIOBQ8N635 442 aa17.04■□□□□ 0.32
CPSF3-201ENST00000238112 ZNF615Q8N8J6 731 aa17.04■□□□□ 0.32
CPSF3-201ENST00000238112 EXD3Q8N9H8 876 aa17.04■□□□□ 0.32
CPSF3-201ENST00000238112 LRRC75AQ8NAA5 344 aa17.04■□□□□ 0.32
CPSF3-201ENST00000238112 ZDHHC1Q8WTX9 485 aa17.04■□□□□ 0.32
CPSF3-201ENST00000238112 HMGB4Q8WW32 186 aa17.04■□□□□ 0.32
CPSF3-201ENST00000238112 LIPHQ8WWY8 451 aa17.04■□□□□ 0.32
CPSF3-201ENST00000238112 NSMAFQ92636 917 aa17.04■□□□□ 0.32
CPSF3-201ENST00000238112 MMABQ96EY8 250 aaPredicted RBP17.04■□□□□ 0.32
CPSF3-201ENST00000238112 MMP25Q9NPA2 562 aa17.04■□□□□ 0.32
CPSF3-201ENST00000238112 UBQLN4Q9NRR5 601 aa17.04■□□□□ 0.32
CPSF3-201ENST00000238112 ZNF69Q9UC07 566 aa17.04■□□□□ 0.32
CPSF3-201ENST00000238112 LRP4O75096 1905 aa17.03■□□□□ 0.32
CPSF3-201ENST00000238112 M0R233 179 aa17.03■□□□□ 0.32
CPSF3-201ENST00000238112 PRKNO60260 465 aaPredicted RBP17.03■□□□□ 0.32
CPSF3-201ENST00000238112 NSA2O95478 260 aaKnown RBP17.03■□□□□ 0.32
CPSF3-201ENST00000238112 LDOC1O95751 146 aaPredicted RBP17.03■□□□□ 0.32
CPSF3-201ENST00000238112 ATXN8OSP0DMR3 200 aa17.03■□□□□ 0.32
CPSF3-201ENST00000238112 GABRG2P18507 467 aa17.03■□□□□ 0.32
CPSF3-201ENST00000238112 DCTDP32321 178 aa17.03■□□□□ 0.32
CPSF3-201ENST00000238112 EPHA4P54764 986 aa17.03■□□□□ 0.32
CPSF3-201ENST00000238112 TAS2R20P59543 309 aa17.03■□□□□ 0.32
CPSF3-201ENST00000238112 RAB14P61106 215 aa17.03■□□□□ 0.32
CPSF3-201ENST00000238112 RPS15P62841 145 aaKnown RBP17.03■□□□□ 0.32
CPSF3-201ENST00000238112 PUDPQ08623 228 aa17.03■□□□□ 0.32
CPSF3-201ENST00000238112 FAAP20Q6NZ36 180 aa17.03■□□□□ 0.32
CPSF3-201ENST00000238112 CDC20BQ86Y33 519 aa17.03■□□□□ 0.32
CPSF3-201ENST00000238112 METTL27Q8N6F8 245 aaPredicted RBP17.03■□□□□ 0.32
CPSF3-201ENST00000238112 GAS2L1Q99501 681 aaPredicted RBP17.03■□□□□ 0.32
CPSF3-201ENST00000238112 NPDC1Q9NQX5 325 aaPredicted RBP17.03■□□□□ 0.32
CPSF3-201ENST00000238112 TVP23AA6NH52 213 aa17.03■□□□□ 0.32
CPSF3-201ENST00000238112 G3V3Q6 166 aa17.03■□□□□ 0.32
CPSF3-201ENST00000238112 SCDO00767 359 aa17.03■□□□□ 0.32
CPSF3-201ENST00000238112 ADRA2CP18825 462 aa17.03■□□□□ 0.32
CPSF3-201ENST00000238112 GRM7Q14831 915 aa17.03■□□□□ 0.32
CPSF3-201ENST00000238112 LINC00303Q3SY05 128 aa17.03■□□□□ 0.32
CPSF3-201ENST00000238112 TCTE1Q5JU00 501 aa17.03■□□□□ 0.32
CPSF3-201ENST00000238112 CLLU1Q5K131 121 aa17.03■□□□□ 0.32
CPSF3-201ENST00000238112 DNAAF1Q8NEP3 725 aa17.03■□□□□ 0.32
CPSF3-201ENST00000238112 OR2T4Q8NH00 348 aa17.03■□□□□ 0.32
CPSF3-201ENST00000238112 LCORQ96JN0 433 aaPredicted RBP17.03■□□□□ 0.32
CPSF3-201ENST00000238112 COMMD4Q9H0A8 199 aa17.03■□□□□ 0.32
CPSF3-201ENST00000238112 GPN1Q9HCN4 374 aaPredicted RBP17.03■□□□□ 0.32
CPSF3-201ENST00000238112 MAB21L2Q9Y586 359 aa17.03■□□□□ 0.32
CPSF3-201ENST00000238112 TRBV5-5A0A0J9YX44 114 aa17.02■□□□□ 0.32
CPSF3-201ENST00000238112 SPTY2D1-AS1A0A0U1RR47 76 aa17.02■□□□□ 0.32
CPSF3-201ENST00000238112 H7C1C5 153 aa17.02■□□□□ 0.32
CPSF3-201ENST00000238112 OIP5O43482 229 aa17.02■□□□□ 0.32
CPSF3-201ENST00000238112 CREBL2O60519 120 aaPredicted RBP17.02■□□□□ 0.32
CPSF3-201ENST00000238112 PDGFAP04085 211 aa17.02■□□□□ 0.32
CPSF3-201ENST00000238112 MAS1P04201 325 aa17.02■□□□□ 0.32
CPSF3-201ENST00000238112 ASAH2BP0C7U1 165 aa17.02■□□□□ 0.32
CPSF3-201ENST00000238112 EN2P19622 333 aaPredicted RBP17.02■□□□□ 0.32
CPSF3-201ENST00000238112 C4BPBP20851 252 aa17.02■□□□□ 0.32
CPSF3-201ENST00000238112 MNDAP41218 407 aa17.02■□□□□ 0.32
CPSF3-201ENST00000238112 HSD17B7P56937 341 aa17.02■□□□□ 0.32
CPSF3-201ENST00000238112 LCN6P62502 163 aa17.02■□□□□ 0.32
CPSF3-201ENST00000238112 SKP2Q13309 424 aa17.02■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms