RNA–Protein interactions for RNA: ENST00000225504.7

SUPT4H1-201, Transcript of SPT4 homolog, DSIF elongation factor subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SUPT4H1, Length 1,489 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT4H1-201ENST00000225504 HAX1O00165 279 aa12.69□□□□□ -0.38
SUPT4H1-201ENST00000225504 RNF13O43567 381 aa12.69□□□□□ -0.38
SUPT4H1-201ENST00000225504 ITGA5P08648 1049 aa12.69□□□□□ -0.38
SUPT4H1-201ENST00000225504 RAP2AP10114 183 aa12.69□□□□□ -0.38
SUPT4H1-201ENST00000225504 PSMB1P20618 241 aaKnown RBP12.69□□□□□ -0.38
SUPT4H1-201ENST00000225504 DNAJA1P31689 397 aaKnown RBP12.69□□□□□ -0.38
SUPT4H1-201ENST00000225504 LIMS1P48059 325 aa12.69□□□□□ -0.38
SUPT4H1-201ENST00000225504 HMGA2P52926 109 aa12.69□□□□□ -0.38
SUPT4H1-201ENST00000225504 SMIM11AP58511 58 aa12.69□□□□□ -0.38
SUPT4H1-201ENST00000225504 ITGADQ13349 1161 aa12.69□□□□□ -0.38
SUPT4H1-201ENST00000225504 P2RY6Q15077 328 aa12.69□□□□□ -0.38
SUPT4H1-201ENST00000225504 CARD17Q5XLA6 110 aa12.69□□□□□ -0.38
SUPT4H1-201ENST00000225504 SLC35D2Q76EJ3 337 aa12.69□□□□□ -0.38
SUPT4H1-201ENST00000225504 ZER1Q7Z7L7 766 aa12.69□□□□□ -0.38
SUPT4H1-201ENST00000225504 TMEM123Q8N131 208 aa12.69□□□□□ -0.38
SUPT4H1-201ENST00000225504 ZNF433Q8N7K0 673 aaPredicted RBP12.69□□□□□ -0.38
SUPT4H1-201ENST00000225504 S100PBPQ96BU1 408 aa12.69□□□□□ -0.38
SUPT4H1-201ENST00000225504 ZC3HAV1LQ96H79 300 aaKnown RBP12.69□□□□□ -0.38
SUPT4H1-201ENST00000225504 TRIM15Q9C019 465 aa12.69□□□□□ -0.38
SUPT4H1-201ENST00000225504 SLCO5A1Q9H2Y9 848 aa12.69□□□□□ -0.38
SUPT4H1-201ENST00000225504 ASB6Q9NWX5 421 aa12.69□□□□□ -0.38
SUPT4H1-201ENST00000225504 UPB1Q9UBR1 384 aa12.69□□□□□ -0.38
SUPT4H1-201ENST00000225504 GPR52Q9Y2T5 361 aa12.69□□□□□ -0.38
SUPT4H1-201ENST00000225504 DHRS12A0PJE2 317 aa12.68□□□□□ -0.38
SUPT4H1-201ENST00000225504 HTR3EA5X5Y0 456 aa12.68□□□□□ -0.38
SUPT4H1-201ENST00000225504 PTP4A3O75365 173 aa12.68□□□□□ -0.38
SUPT4H1-201ENST00000225504 CNOT4O95628 575 aaKnown RBP12.68□□□□□ -0.38
SUPT4H1-201ENST00000225504 SAGP10523 405 aaPredicted RBP12.68□□□□□ -0.38
SUPT4H1-201ENST00000225504 EPXP11678 715 aa12.68□□□□□ -0.38
SUPT4H1-201ENST00000225504 BIDP55957 195 aa12.68□□□□□ -0.38
SUPT4H1-201ENST00000225504 RPS4XP62701 263 aaKnown RBP12.68□□□□□ -0.38
SUPT4H1-201ENST00000225504 CAMK2DQ13557 499 aa12.68□□□□□ -0.38
SUPT4H1-201ENST00000225504 MELKQ14680 651 aa12.68□□□□□ -0.38
SUPT4H1-201ENST00000225504 BHLHA15Q7RTS1 189 aaPredicted RBP12.68□□□□□ -0.38
SUPT4H1-201ENST00000225504 OAFQ86UD1 273 aa12.68□□□□□ -0.38
SUPT4H1-201ENST00000225504 IGFN1Q86VF2 1251 aa12.68□□□□□ -0.38
SUPT4H1-201ENST00000225504 CDK20Q8IZL9 346 aa12.68□□□□□ -0.38
SUPT4H1-201ENST00000225504 LRRC75AQ8NAA5 344 aa12.68□□□□□ -0.38
SUPT4H1-201ENST00000225504 OR4C15Q8NGM1 316 aa12.68□□□□□ -0.38
SUPT4H1-201ENST00000225504 FAM222BQ8WU58 562 aa12.68□□□□□ -0.38
SUPT4H1-201ENST00000225504 ZNF837Q96EG3 531 aaPredicted RBP12.68□□□□□ -0.38
SUPT4H1-201ENST00000225504 HDHD5Q9BXW7 423 aa12.68□□□□□ -0.38
SUPT4H1-201ENST00000225504 ACTR6Q9GZN1 396 aa12.68□□□□□ -0.38
SUPT4H1-201ENST00000225504 MMADHCQ9H3L0 296 aaPredicted RBP12.68□□□□□ -0.38
SUPT4H1-201ENST00000225504 MALT1Q9UDY8 824 aa12.68□□□□□ -0.38
SUPT4H1-201ENST00000225504 KCNN3Q9UGI6 736 aa12.68□□□□□ -0.38
SUPT4H1-201ENST00000225504 RCE1Q9Y256 329 aa12.68□□□□□ -0.38
SUPT4H1-201ENST00000225504 LYVE1Q9Y5Y7 322 aa12.68□□□□□ -0.38
SUPT4H1-201ENST00000225504 UNC79Q9P2D8 2635 aa12.68□□□□□ -0.38
SUPT4H1-201ENST00000225504 CACNA1DQ01668 2161 aa12.68□□□□□ -0.38
SUPT4H1-201ENST00000225504 TNFRSF11BO00300 401 aa12.67□□□□□ -0.38
SUPT4H1-201ENST00000225504 KLF4O43474 513 aa12.67□□□□□ -0.38
SUPT4H1-201ENST00000225504 CDH2P19022 906 aaPredicted RBP12.67□□□□□ -0.38
SUPT4H1-201ENST00000225504 COX5AP20674 150 aa12.67□□□□□ -0.38
SUPT4H1-201ENST00000225504 RUNX1T1Q06455 604 aa12.67□□□□□ -0.38
SUPT4H1-201ENST00000225504 CCNIQ14094 377 aa12.67□□□□□ -0.38
SUPT4H1-201ENST00000225504 OR2T5Q6IEZ7 315 aa12.67□□□□□ -0.38
SUPT4H1-201ENST00000225504 POMGNT2Q8NAT1 580 aa12.67□□□□□ -0.38
SUPT4H1-201ENST00000225504 ANKK1Q8NFD2 765 aa12.67□□□□□ -0.38
SUPT4H1-201ENST00000225504 OR2T29Q8NH02 315 aa12.67□□□□□ -0.38
SUPT4H1-201ENST00000225504 KISS1RQ969F8 398 aaPredicted RBP12.67□□□□□ -0.38
SUPT4H1-201ENST00000225504 DACH2Q96NX9 599 aa12.67□□□□□ -0.38
SUPT4H1-201ENST00000225504 MED18Q9BUE0 208 aa12.67□□□□□ -0.38
SUPT4H1-201ENST00000225504 MCCC2Q9HCC0 563 aa12.67□□□□□ -0.38
SUPT4H1-201ENST00000225504 INIPQ9NRY2 104 aa12.67□□□□□ -0.38
SUPT4H1-201ENST00000225504 NDRG3Q9UGV2 375 aa12.67□□□□□ -0.38
SUPT4H1-201ENST00000225504 HIF3AQ9Y2N7 669 aa12.67□□□□□ -0.38
SUPT4H1-201ENST00000225504 U3KQV3 271 aa12.67□□□□□ -0.38
SUPT4H1-201ENST00000225504 FBN2P35556 2912 aa12.67□□□□□ -0.38
SUPT4H1-201ENST00000225504 ANKHD1Q8IWZ3 2542 aaKnown RBP12.67□□□□□ -0.38
SUPT4H1-201ENST00000225504 ZNF726A6NNF4 738 aa12.66□□□□□ -0.38
SUPT4H1-201ENST00000225504 M0R3G1 203 aa12.66□□□□□ -0.38
SUPT4H1-201ENST00000225504 CLOCKO15516 846 aa12.66□□□□□ -0.38
SUPT4H1-201ENST00000225504 SIAH2O43255 324 aa12.66□□□□□ -0.38
SUPT4H1-201ENST00000225504 SLC43A1O75387 559 aa12.66□□□□□ -0.38
SUPT4H1-201ENST00000225504 RAD51DO75771 328 aa12.66□□□□□ -0.38
SUPT4H1-201ENST00000225504 KRT33AO76009 404 aa12.66□□□□□ -0.38
SUPT4H1-201ENST00000225504 KRT36O76013 467 aa12.66□□□□□ -0.38
SUPT4H1-201ENST00000225504 IL32P24001 234 aa12.66□□□□□ -0.38
SUPT4H1-201ENST00000225504 IST1P53990 364 aa12.66□□□□□ -0.38
SUPT4H1-201ENST00000225504 KRTAP10-9P60411 292 aa12.66□□□□□ -0.38
SUPT4H1-201ENST00000225504 DAZAP2Q15038 168 aaPredicted RBP12.66□□□□□ -0.38
SUPT4H1-201ENST00000225504 GABRA6Q16445 453 aa12.66□□□□□ -0.38
SUPT4H1-201ENST00000225504 ACKR1Q16570 336 aa12.66□□□□□ -0.38
SUPT4H1-201ENST00000225504 ZBED5Q49AG3 693 aa12.66□□□□□ -0.38
SUPT4H1-201ENST00000225504 C1orf146Q5VVC0 180 aa12.66□□□□□ -0.38
SUPT4H1-201ENST00000225504 ALKBH2Q6NS38 261 aa12.66□□□□□ -0.38
SUPT4H1-201ENST00000225504 TMEM179BQ7Z7N9 219 aa12.66□□□□□ -0.38
SUPT4H1-201ENST00000225504 C20orf196Q8IYI0 205 aa12.66□□□□□ -0.38
SUPT4H1-201ENST00000225504 PAPD5Q8NDF8 572 aaKnown RBP12.66□□□□□ -0.38
SUPT4H1-201ENST00000225504 STEAP2Q8NFT2 490 aa12.66□□□□□ -0.38
SUPT4H1-201ENST00000225504 POP5Q969H6 163 aaKnown RBP12.66□□□□□ -0.38
SUPT4H1-201ENST00000225504 ALKBH3Q96Q83 286 aaPredicted RBP12.66□□□□□ -0.38
SUPT4H1-201ENST00000225504 LINC00470Q9BZP3 86 aa12.66□□□□□ -0.38
SUPT4H1-201ENST00000225504 GPR35Q9HC97 309 aa12.66□□□□□ -0.38
SUPT4H1-201ENST00000225504 CCM2LQ9NUG4 571 aaPredicted RBP12.66□□□□□ -0.38
SUPT4H1-201ENST00000225504 TMCC3Q9ULS5 477 aa12.66□□□□□ -0.38
SUPT4H1-201ENST00000225504 TMEM5Q9Y2B1 443 aa12.66□□□□□ -0.38
SUPT4H1-201ENST00000225504 A0A1W2PR80 420 aa12.65□□□□□ -0.38
SUPT4H1-201ENST00000225504 CIB4A0PJX0 185 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms