RNA–Protein interactions for RNA: ENST00000161559.10

CEACAM1-201, Transcript of carcinoembryonic antigen related cell adhesion molecule 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CEACAM1, Length 3,519 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CEACAM1-201ENST00000161559 CD93Q9NPY3 652 aa5.32□□□□□ -1.56
CEACAM1-201ENST00000161559 PCDHB16Q9NRJ7 776 aa5.32□□□□□ -1.56
CEACAM1-201ENST00000161559 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP5.32□□□□□ -1.56
CEACAM1-201ENST00000161559 PRR13Q9NZ81 148 aa5.32□□□□□ -1.56
CEACAM1-201ENST00000161559 ABRACLQ9P1F3 81 aa5.32□□□□□ -1.56
CEACAM1-201ENST00000161559 GPR34Q9UPC5 381 aa5.32□□□□□ -1.56
CEACAM1-201ENST00000161559 KIF26BQ2KJY2 2108 aa5.32□□□□□ -1.56
CEACAM1-201ENST00000161559 CPED1A4D0V7 1026 aa5.32□□□□□ -1.56
CEACAM1-201ENST00000161559 F5H5P2 479 aa5.32□□□□□ -1.56
CEACAM1-201ENST00000161559 H0Y8X5 98 aa5.32□□□□□ -1.56
CEACAM1-201ENST00000161559 ZNF254O75437 659 aa5.32□□□□□ -1.56
CEACAM1-201ENST00000161559 EPCAMP16422 314 aa5.32□□□□□ -1.56
CEACAM1-201ENST00000161559 NFYBP25208 207 aa5.32□□□□□ -1.56
CEACAM1-201ENST00000161559 RPL4P36578 427 aaKnown RBP5.32□□□□□ -1.56
CEACAM1-201ENST00000161559 RAB28P51157 221 aa5.32□□□□□ -1.56
CEACAM1-201ENST00000161559 PPP1CAP62136 330 aa5.32□□□□□ -1.56
CEACAM1-201ENST00000161559 STX4Q12846 297 aa5.32□□□□□ -1.56
CEACAM1-201ENST00000161559 TMEM31Q5JXX7 168 aa5.32□□□□□ -1.56
CEACAM1-201ENST00000161559 FAM69AQ5T7M9 428 aa5.32□□□□□ -1.56
CEACAM1-201ENST00000161559 ASPHD2Q6ICH7 369 aa5.32□□□□□ -1.56
CEACAM1-201ENST00000161559 LILRA6Q6PI73 481 aa5.32□□□□□ -1.56
CEACAM1-201ENST00000161559 ERN2Q76MJ5 926 aaKnown RBP5.32□□□□□ -1.56
CEACAM1-201ENST00000161559 RNF44Q7L0R7 432 aa5.32□□□□□ -1.56
CEACAM1-201ENST00000161559 RANBP3LQ86VV4 465 aaPredicted RBP5.32□□□□□ -1.56
CEACAM1-201ENST00000161559 CDH26Q8IXH8 852 aa5.32□□□□□ -1.56
CEACAM1-201ENST00000161559 NRSN1Q8IZ57 195 aa5.32□□□□□ -1.56
CEACAM1-201ENST00000161559 LRRC25Q8N386 305 aaPredicted RBP5.32□□□□□ -1.56
CEACAM1-201ENST00000161559 GALNT16Q8N428 558 aa5.32□□□□□ -1.56
CEACAM1-201ENST00000161559 COX18Q8N8Q8 333 aa5.32□□□□□ -1.56
CEACAM1-201ENST00000161559 OR4S1Q8NGB4 309 aa5.32□□□□□ -1.56
CEACAM1-201ENST00000161559 PATE1Q8WXA2 126 aa5.32□□□□□ -1.56
CEACAM1-201ENST00000161559 SLC39A7Q92504 469 aa5.32□□□□□ -1.56
CEACAM1-201ENST00000161559 MS4A4EQ96PG1 132 aa5.32□□□□□ -1.56
CEACAM1-201ENST00000161559 CNN2Q99439 309 aaKnown RBP5.32□□□□□ -1.56
CEACAM1-201ENST00000161559 TINAGL1Q9GZM7 467 aaPredicted RBP5.32□□□□□ -1.56
CEACAM1-201ENST00000161559 NKX2-4Q9H2Z4 354 aa5.32□□□□□ -1.56
CEACAM1-201ENST00000161559 TMEM185BQ9H7F4 350 aa5.32□□□□□ -1.56
CEACAM1-201ENST00000161559 WDR76Q9H967 626 aa5.32□□□□□ -1.56
CEACAM1-201ENST00000161559 PRSS16Q9NQE7 514 aa5.32□□□□□ -1.56
CEACAM1-201ENST00000161559 TAS2R3Q9NYW6 316 aa5.32□□□□□ -1.56
CEACAM1-201ENST00000161559 PTTG3PQ9NZH4 202 aa5.32□□□□□ -1.56
CEACAM1-201ENST00000161559 CHRNA9Q9UGM1 479 aa5.32□□□□□ -1.56
CEACAM1-201ENST00000161559 GMEB2Q9UKD1 530 aa5.32□□□□□ -1.56
CEACAM1-201ENST00000161559 ZBTB32Q9Y2Y4 487 aaPredicted RBP5.32□□□□□ -1.56
CEACAM1-201ENST00000161559 MED31Q9Y3C7 131 aa5.32□□□□□ -1.56
CEACAM1-201ENST00000161559 V9GY05 133 aa5.32□□□□□ -1.56
CEACAM1-201ENST00000161559 SEC16AO15027 2179 aa5.32□□□□□ -1.56
CEACAM1-201ENST00000161559 LOC400499M0QZD8 3231 aa5.32□□□□□ -1.56
CEACAM1-201ENST00000161559 ZNF98A6NK75 572 aa5.31□□□□□ -1.56
CEACAM1-201ENST00000161559 BLOC1S5-TXNDC5H3BN57 136 aa5.31□□□□□ -1.56
CEACAM1-201ENST00000161559 SLC25A12O75746 678 aa5.31□□□□□ -1.56
CEACAM1-201ENST00000161559 RPN2P04844 631 aa5.31□□□□□ -1.56
CEACAM1-201ENST00000161559 ITGA5P08648 1049 aa5.31□□□□□ -1.56
CEACAM1-201ENST00000161559 NID1P14543 1247 aa5.31□□□□□ -1.56
CEACAM1-201ENST00000161559 CBR1P16152 277 aa5.31□□□□□ -1.56
CEACAM1-201ENST00000161559 SPI1P17947 270 aa5.31□□□□□ -1.56
CEACAM1-201ENST00000161559 DRD3P35462 400 aa5.31□□□□□ -1.56
CEACAM1-201ENST00000161559 CDKN2AP42771 156 aaKnown RBP5.31□□□□□ -1.56
CEACAM1-201ENST00000161559 KCNJ3P48549 501 aa5.31□□□□□ -1.56
CEACAM1-201ENST00000161559 NKPD1Q17RQ9 610 aa5.31□□□□□ -1.56
CEACAM1-201ENST00000161559 ARHGAP11BQ3KRB8 267 aa5.31□□□□□ -1.56
CEACAM1-201ENST00000161559 DMRTC1Q5HYR2 192 aa5.31□□□□□ -1.56
CEACAM1-201ENST00000161559 ALG10BQ5I7T1 473 aa5.31□□□□□ -1.56
CEACAM1-201ENST00000161559 MDGA2Q7Z553 956 aa5.31□□□□□ -1.56
CEACAM1-201ENST00000161559 PDZD9Q8IXQ8 264 aa5.31□□□□□ -1.56
CEACAM1-201ENST00000161559 YAF2Q8IY57 180 aa5.31□□□□□ -1.56
CEACAM1-201ENST00000161559 PUSL1Q8N0Z8 303 aaKnown RBP5.31□□□□□ -1.56
CEACAM1-201ENST00000161559 PLPP7Q8NBV4 271 aa5.31□□□□□ -1.56
CEACAM1-201ENST00000161559 CLRN3Q8NCR9 226 aa5.31□□□□□ -1.56
CEACAM1-201ENST00000161559 FAM71CQ8NEG0 241 aa5.31□□□□□ -1.56
CEACAM1-201ENST00000161559 OR1S2Q8NGQ3 325 aa5.31□□□□□ -1.56
CEACAM1-201ENST00000161559 OR1J2Q8NGS2 313 aa5.31□□□□□ -1.56
CEACAM1-201ENST00000161559 SFXN5Q8TD22 340 aa5.31□□□□□ -1.56
CEACAM1-201ENST00000161559 CXorf40AQ8TE69 158 aa5.31□□□□□ -1.56
CEACAM1-201ENST00000161559 ROBO4Q8WZ75 1007 aa5.31□□□□□ -1.56
CEACAM1-201ENST00000161559 C12orf57Q99622 126 aa5.31□□□□□ -1.56
CEACAM1-201ENST00000161559 CMSS1Q9BQ75 279 aaKnown RBP5.31□□□□□ -1.56
CEACAM1-201ENST00000161559 ACTR6Q9GZN1 396 aa5.31□□□□□ -1.56
CEACAM1-201ENST00000161559 ZNF350Q9GZX5 532 aa5.31□□□□□ -1.56
CEACAM1-201ENST00000161559 SRA1Q9HD15 236 aaKnown RBP5.31□□□□□ -1.56
CEACAM1-201ENST00000161559 STEAP1Q9UHE8 339 aa5.31□□□□□ -1.56
CEACAM1-201ENST00000161559 SLC6A5Q9Y345 797 aa5.31□□□□□ -1.56
CEACAM1-201ENST00000161559 TRAV18A0A075B6X5 111 aa5.31□□□□□ -1.56
CEACAM1-201ENST00000161559 A0A0A6YYC8 382 aaPredicted RBP5.31□□□□□ -1.56
CEACAM1-201ENST00000161559 OR6C65A6NJZ3 312 aa5.31□□□□□ -1.56
CEACAM1-201ENST00000161559 KRBOX1C9JBD0 128 aa5.31□□□□□ -1.56
CEACAM1-201ENST00000161559 I3L1I5 382 aaPredicted RBP5.31□□□□□ -1.56
CEACAM1-201ENST00000161559 SULT1C2O00338 296 aa5.31□□□□□ -1.56
CEACAM1-201ENST00000161559 KCNJ13O60928 360 aa5.31□□□□□ -1.56
CEACAM1-201ENST00000161559 ADH5P11766 374 aa5.31□□□□□ -1.56
CEACAM1-201ENST00000161559 GTF2F2P13984 249 aa5.31□□□□□ -1.56
CEACAM1-201ENST00000161559 AKR1C3P42330 323 aa5.31□□□□□ -1.56
CEACAM1-201ENST00000161559 RAG2P55895 527 aa5.31□□□□□ -1.56
CEACAM1-201ENST00000161559 RAP2BP61225 183 aa5.31□□□□□ -1.56
CEACAM1-201ENST00000161559 ST8SIA6P61647 398 aa5.31□□□□□ -1.56
CEACAM1-201ENST00000161559 UBE2IP63279 158 aaKnown RBP5.31□□□□□ -1.56
CEACAM1-201ENST00000161559 LTBQ06643 244 aa5.31□□□□□ -1.56
CEACAM1-201ENST00000161559 ERV3-1Q14264 604 aa5.31□□□□□ -1.56
CEACAM1-201ENST00000161559 IRF4Q15306 451 aa5.31□□□□□ -1.56
CEACAM1-201ENST00000161559 TGIF1Q15583 401 aa5.31□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms