RNA–Protein interactions for RNA: ENST00000005226.11

USH1C-201, Transcript of USH1 protein network component harmonin, humanhuman

APPRIS P3 TSL 5 BASIC

Gene USH1C, Length 2,700 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-201ENST00000005226 RAP2BP61225 183 aa12.8□□□□□ -0.36
USH1C-201ENST00000005226 ZSCAN2Q7Z7L9 614 aaPredicted RBP12.8□□□□□ -0.36
USH1C-201ENST00000005226 BIVMQ86UB2 503 aa12.8□□□□□ -0.36
USH1C-201ENST00000005226 OR4C16Q8NGL9 310 aa12.8□□□□□ -0.36
USH1C-201ENST00000005226 RERGQ96A58 199 aaPredicted RBP12.8□□□□□ -0.36
USH1C-201ENST00000005226 MYADMQ96S97 322 aa12.8□□□□□ -0.36
USH1C-201ENST00000005226 RXFP3Q9NSD7 469 aa12.8□□□□□ -0.36
USH1C-201ENST00000005226 IKZF2Q9UKS7 526 aa12.8□□□□□ -0.36
USH1C-201ENST00000005226 HEBP2Q9Y5Z4 205 aa12.8□□□□□ -0.36
USH1C-201ENST00000005226 SLC22A23A1A5C7 686 aa12.79□□□□□ -0.36
USH1C-201ENST00000005226 GPRIN2O60269 458 aa12.79□□□□□ -0.36
USH1C-201ENST00000005226 ITGA10O75578 1167 aa12.79□□□□□ -0.36
USH1C-201ENST00000005226 OR2A4O95047 310 aa12.79□□□□□ -0.36
USH1C-201ENST00000005226 S100A11P31949 105 aa12.79□□□□□ -0.36
USH1C-201ENST00000005226 OLFML2AQ68BL7 652 aa12.79□□□□□ -0.36
USH1C-201ENST00000005226 ARSKQ6UWY0 536 aa12.79□□□□□ -0.36
USH1C-201ENST00000005226 SLC35F3Q8IY50 421 aa12.79□□□□□ -0.36
USH1C-201ENST00000005226 MUC20Q8N307 709 aaPredicted RBP12.79□□□□□ -0.36
USH1C-201ENST00000005226 OR51D1Q8NGF3 324 aa12.79□□□□□ -0.36
USH1C-201ENST00000005226 OR5AK2Q8NH90 309 aa12.79□□□□□ -0.36
USH1C-201ENST00000005226 OR2A7Q96R45 310 aa12.79□□□□□ -0.36
USH1C-201ENST00000005226 ZFYVE21Q9BQ24 234 aa12.79□□□□□ -0.36
USH1C-201ENST00000005226 KLHDC3Q9BQ90 382 aa12.79□□□□□ -0.36
USH1C-201ENST00000005226 KXD1Q9BQD3 176 aa12.79□□□□□ -0.36
USH1C-201ENST00000005226 CFHR5Q9BXR6 569 aa12.79□□□□□ -0.36
USH1C-201ENST00000005226 TTYH1Q9H313 450 aaPredicted RBP12.79□□□□□ -0.36
USH1C-201ENST00000005226 URADA6NGE7 173 aa12.79□□□□□ -0.36
USH1C-201ENST00000005226 TGFBR3LH3BV60 316 aa12.79□□□□□ -0.36
USH1C-201ENST00000005226 ACOT7O00154 380 aa12.79□□□□□ -0.36
USH1C-201ENST00000005226 ADH1BP00325 375 aa12.79□□□□□ -0.36
USH1C-201ENST00000005226 HIST1H2ABP04908 130 aa12.79□□□□□ -0.36
USH1C-201ENST00000005226 MAZP56270 477 aaKnown RBP12.79□□□□□ -0.36
USH1C-201ENST00000005226 LTBQ06643 244 aa12.79□□□□□ -0.36
USH1C-201ENST00000005226 ATRAIDQ6UW56 229 aa12.79□□□□□ -0.36
USH1C-201ENST00000005226 HIST3H2AQ7L7L0 130 aa12.79□□□□□ -0.36
USH1C-201ENST00000005226 HIST1H2ACQ93077 130 aa12.79□□□□□ -0.36
USH1C-201ENST00000005226 PPP1R14AQ96A00 147 aa12.79□□□□□ -0.36
USH1C-201ENST00000005226 MIB2Q96AX9 1013 aa12.79□□□□□ -0.36
USH1C-201ENST00000005226 CTHRC1Q96CG8 243 aa12.79□□□□□ -0.36
USH1C-201ENST00000005226 TOE1Q96GM8 510 aaKnown RBP12.79□□□□□ -0.36
USH1C-201ENST00000005226 MOGAT1Q96PD6 335 aa12.79□□□□□ -0.36
USH1C-201ENST00000005226 ELF4Q99607 663 aaPredicted RBP12.79□□□□□ -0.36
USH1C-201ENST00000005226 RPP25Q9BUL9 199 aaKnown RBP12.79□□□□□ -0.36
USH1C-201ENST00000005226 MFRPQ9BY79 579 aa12.79□□□□□ -0.36
USH1C-201ENST00000005226 B3GNT4Q9C0J1 378 aa12.79□□□□□ -0.36
USH1C-201ENST00000005226 GPN1Q9HCN4 374 aaPredicted RBP12.79□□□□□ -0.36
USH1C-201ENST00000005226 TMEM138Q9NPI0 162 aa12.79□□□□□ -0.36
USH1C-201ENST00000005226 EMC3Q9P0I2 261 aa12.79□□□□□ -0.36
USH1C-201ENST00000005226 UPK3AO75631 287 aa12.78□□□□□ -0.36
USH1C-201ENST00000005226 TSPAN9O75954 239 aa12.78□□□□□ -0.36
USH1C-201ENST00000005226 SPDEFO95238 335 aa12.78□□□□□ -0.36
USH1C-201ENST00000005226 NAGAP17050 411 aa12.78□□□□□ -0.36
USH1C-201ENST00000005226 S1PR1P21453 382 aa12.78□□□□□ -0.36
USH1C-201ENST00000005226 ZP3P21754 424 aa12.78□□□□□ -0.36
USH1C-201ENST00000005226 FCARP24071 287 aa12.78□□□□□ -0.36
USH1C-201ENST00000005226 CAPZA2P47755 286 aa12.78□□□□□ -0.36
USH1C-201ENST00000005226 ZNF684Q5T5D7 378 aa12.78□□□□□ -0.36
USH1C-201ENST00000005226 NPSR1Q6W5P4 371 aa12.78□□□□□ -0.36
USH1C-201ENST00000005226 DPY19L2P2Q6ZN68 376 aa12.78□□□□□ -0.36
USH1C-201ENST00000005226 LRRC69Q6ZNQ3 347 aa12.78□□□□□ -0.36
USH1C-201ENST00000005226 SLC36A1Q7Z2H8 476 aa12.78□□□□□ -0.36
USH1C-201ENST00000005226 LRRTM1Q86UE6 522 aa12.78□□□□□ -0.36
USH1C-201ENST00000005226 LHFPL5Q8TAF8 219 aa12.78□□□□□ -0.36
USH1C-201ENST00000005226 ZNF524Q96C55 264 aa12.78□□□□□ -0.36
USH1C-201ENST00000005226 NMNAT2Q9BZQ4 307 aa12.78□□□□□ -0.36
USH1C-201ENST00000005226 ZNF275Q9NSD4 429 aaPredicted RBP12.78□□□□□ -0.36
USH1C-201ENST00000005226 FBXL3Q9UKT7 428 aa12.78□□□□□ -0.36
USH1C-201ENST00000005226 TRANK1O15050 2925 aa12.78□□□□□ -0.36
USH1C-201ENST00000005226 MYO9BQ13459 2157 aa12.78□□□□□ -0.36
USH1C-201ENST00000005226 OIP5O43482 229 aa12.78□□□□□ -0.36
USH1C-201ENST00000005226 GLCEO94923 617 aa12.78□□□□□ -0.36
USH1C-201ENST00000005226 GLSO94925 669 aaPredicted RBP12.78□□□□□ -0.36
USH1C-201ENST00000005226 CSTAP01040 98 aa12.78□□□□□ -0.36
USH1C-201ENST00000005226 CPN1P15169 458 aa12.78□□□□□ -0.36
USH1C-201ENST00000005226 RBM34P42696 430 aaKnown RBP12.78□□□□□ -0.36
USH1C-201ENST00000005226 CCR4P51679 360 aa12.78□□□□□ -0.36
USH1C-201ENST00000005226 DHODHQ02127 395 aa12.78□□□□□ -0.36
USH1C-201ENST00000005226 GAS6Q14393 721 aa12.78□□□□□ -0.36
USH1C-201ENST00000005226 Q499Y3 187 aa12.78□□□□□ -0.36
USH1C-201ENST00000005226 ZNF542PQ5EBM4 170 aa12.78□□□□□ -0.36
USH1C-201ENST00000005226 OR51S1Q8NGJ8 323 aa12.78□□□□□ -0.36
USH1C-201ENST00000005226 WDR76Q9H967 626 aa12.78□□□□□ -0.36
USH1C-201ENST00000005226 LYRM4Q9HD34 91 aa12.78□□□□□ -0.36
USH1C-201ENST00000005226 IL23AQ9NPF7 189 aa12.78□□□□□ -0.36
USH1C-201ENST00000005226 OPN4Q9UHM6 478 aa12.78□□□□□ -0.36
USH1C-201ENST00000005226 GPR160Q9UJ42 338 aa12.78□□□□□ -0.36
USH1C-201ENST00000005226 SPACA6W5XKT8 324 aa12.78□□□□□ -0.36
USH1C-201ENST00000005226 TRAV18A0A075B6X5 111 aa12.77□□□□□ -0.36
USH1C-201ENST00000005226 LINC01553A4QN01 128 aa12.77□□□□□ -0.36
USH1C-201ENST00000005226 CTNSO60931 367 aa12.77□□□□□ -0.36
USH1C-201ENST00000005226 RBBP9O75884 186 aa12.77□□□□□ -0.36
USH1C-201ENST00000005226 ANXA2P07355 339 aaKnown RBP12.77□□□□□ -0.36
USH1C-201ENST00000005226 EPHA4P54764 986 aa12.77□□□□□ -0.36
USH1C-201ENST00000005226 MAT1AQ00266 395 aaKnown RBP12.77□□□□□ -0.36
USH1C-201ENST00000005226 SORDQ00796 357 aa12.77□□□□□ -0.36
USH1C-201ENST00000005226 ALKBH1Q13686 389 aaKnown RBP12.77□□□□□ -0.36
USH1C-201ENST00000005226 KIR2DS3Q14952 304 aa12.77□□□□□ -0.36
USH1C-201ENST00000005226 ZNF776Q68DI1 518 aaPredicted RBP12.77□□□□□ -0.36
USH1C-201ENST00000005226 CSNK1A1LQ8N752 337 aa12.77□□□□□ -0.36
USH1C-201ENST00000005226 ATOH1Q92858 354 aaPredicted RBP12.77□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms