RNA–Protein interactions for RNA: ENSMUST00000108531.7

Nup88-203, Transcript of Nuclear pore complex protein Nup88, mousemouse

TSL 1 (best) BASIC

Gene Nup88, Length 2,453 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88-203ENSMUST00000108531 Ubfd1Q78JW9 368 aa11.87□□□□□ -0.51
Nup88-203ENSMUST00000108531 Spaca9Q7TPM5 168 aa11.87□□□□□ -0.51
Nup88-203ENSMUST00000108531 Adam30Q811Q3 732 aa11.87□□□□□ -0.51
Nup88-203ENSMUST00000108531 Vmn1r210Q8R274 306 aa11.87□□□□□ -0.51
Nup88-203ENSMUST00000108531 LgalslQ8VED9 172 aa11.87□□□□□ -0.51
Nup88-203ENSMUST00000108531 Gpx4Q91XR9 253 aa11.87□□□□□ -0.51
Nup88-203ENSMUST00000108531 Nkiras2Q9CR56 191 aa11.87□□□□□ -0.51
Nup88-203ENSMUST00000108531 Sec13Q9D1M0 322 aa11.87□□□□□ -0.51
Nup88-203ENSMUST00000108531 Slc35a4Q9D321 324 aa11.87□□□□□ -0.51
Nup88-203ENSMUST00000108531 Olfr1223A0A1L1SU13 311 aa11.87□□□□□ -0.51
Nup88-203ENSMUST00000108531 Fam209A2APA5 170 aa11.87□□□□□ -0.51
Nup88-203ENSMUST00000108531 AI182371A2AS37 356 aa11.87□□□□□ -0.51
Nup88-203ENSMUST00000108531 Gm5799E9Q2M1 201 aa11.87□□□□□ -0.51
Nup88-203ENSMUST00000108531 5430401F13RikE9Q328 175 aa11.87□□□□□ -0.51
Nup88-203ENSMUST00000108531 Gm8050L7N2E3 205 aa11.87□□□□□ -0.51
Nup88-203ENSMUST00000108531 Sstr2P30875 369 aa11.87□□□□□ -0.51
Nup88-203ENSMUST00000108531 Nkx2-2P42586 273 aa11.87□□□□□ -0.51
Nup88-203ENSMUST00000108531 Adamts15P59384 950 aa11.87□□□□□ -0.51
Nup88-203ENSMUST00000108531 Actr1aP61164 376 aa11.87□□□□□ -0.51
Nup88-203ENSMUST00000108531 Ppp2cbP62715 309 aa11.87□□□□□ -0.51
Nup88-203ENSMUST00000108531 Ppp2caP63330 309 aa11.87□□□□□ -0.51
Nup88-203ENSMUST00000108531 Dlx5P70396 289 aa11.87□□□□□ -0.51
Nup88-203ENSMUST00000108531 Olfr1428Q0VDY1 314 aa11.87□□□□□ -0.51
Nup88-203ENSMUST00000108531 Krba1Q6NXZ1 1043 aa11.87□□□□□ -0.51
Nup88-203ENSMUST00000108531 Npr2Q6VVW5 1047 aa11.87□□□□□ -0.51
Nup88-203ENSMUST00000108531 Med19Q8C1S0 244 aa11.87□□□□□ -0.51
Nup88-203ENSMUST00000108531 SinhcafQ8C8M1 221 aaKnown RBP11.87□□□□□ -0.51
Nup88-203ENSMUST00000108531 RfesdQ8K2P6 157 aa11.87□□□□□ -0.51
Nup88-203ENSMUST00000108531 Vmn1r74Q8R290 304 aa11.87□□□□□ -0.51
Nup88-203ENSMUST00000108531 RergQ8R367 199 aa11.87□□□□□ -0.51
Nup88-203ENSMUST00000108531 Actr1bQ8R5C5 376 aa11.87□□□□□ -0.51
Nup88-203ENSMUST00000108531 GpnmbQ99P91 574 aa11.87□□□□□ -0.51
Nup88-203ENSMUST00000108531 Ier3ip1Q9CR20 82 aa11.87□□□□□ -0.51
Nup88-203ENSMUST00000108531 FtmtQ9D5H4 237 aa11.87□□□□□ -0.51
Nup88-203ENSMUST00000108531 Tex44Q9DA60 530 aa11.87□□□□□ -0.51
Nup88-203ENSMUST00000108531 Stra6lQ9DBN1 621 aa11.87□□□□□ -0.51
Nup88-203ENSMUST00000108531 Jmjd6Q9ERI5 403 aa11.87□□□□□ -0.51
Nup88-203ENSMUST00000108531 Dmrt1Q9QZ59 374 aa11.87□□□□□ -0.51
Nup88-203ENSMUST00000108531 Ptdss2Q9Z1X2 473 aa11.87□□□□□ -0.51
Nup88-203ENSMUST00000108531 Spag17Q5S003 2320 aa11.87□□□□□ -0.51
Nup88-203ENSMUST00000108531 Trabd2bB1ATG9 517 aa11.86□□□□□ -0.51
Nup88-203ENSMUST00000108531 Zfp945E9PYM8 794 aa11.86□□□□□ -0.51
Nup88-203ENSMUST00000108531 Olfr610E9Q598 315 aa11.86□□□□□ -0.51
Nup88-203ENSMUST00000108531 Olfr738L7N1X7 311 aa11.86□□□□□ -0.51
Nup88-203ENSMUST00000108531 Cops3O88543 423 aa11.86□□□□□ -0.51
Nup88-203ENSMUST00000108531 CtslP06797 334 aa11.86□□□□□ -0.51
Nup88-203ENSMUST00000108531 Tbxa2rP30987 341 aa11.86□□□□□ -0.51
Nup88-203ENSMUST00000108531 Ccr4P51680 360 aa11.86□□□□□ -0.51
Nup88-203ENSMUST00000108531 Acyp2P56375 106 aa11.86□□□□□ -0.51
Nup88-203ENSMUST00000108531 Arf3P61205 181 aa11.86□□□□□ -0.51
Nup88-203ENSMUST00000108531 Mier2Q3U3N0 541 aa11.86□□□□□ -0.51
Nup88-203ENSMUST00000108531 Shisa3Q3UPR0 238 aa11.86□□□□□ -0.51
Nup88-203ENSMUST00000108531 Pou4f3Q63955 338 aa11.86□□□□□ -0.51
Nup88-203ENSMUST00000108531 Ctxn1Q8K129 82 aa11.86□□□□□ -0.51
Nup88-203ENSMUST00000108531 Saysd1Q8K190 188 aa11.86□□□□□ -0.51
Nup88-203ENSMUST00000108531 Uxs1Q91XL3 420 aa11.86□□□□□ -0.51
Nup88-203ENSMUST00000108531 Ripply3Q924S9 152 aa11.86□□□□□ -0.51
Nup88-203ENSMUST00000108531 CrtapQ9CYD3 400 aa11.86□□□□□ -0.51
Nup88-203ENSMUST00000108531 Slc25a27Q9D6D0 322 aa11.86□□□□□ -0.51
Nup88-203ENSMUST00000108531 Eif3kQ9DBZ5 218 aa11.86□□□□□ -0.51
Nup88-203ENSMUST00000108531 Olfr971Q9EQ96 307 aa11.86□□□□□ -0.51
Nup88-203ENSMUST00000108531 Phf3B2RQG2 2025 aaKnown RBP11.86□□□□□ -0.51
Nup88-203ENSMUST00000108531 Vmn2r101E9PZS9 857 aa11.86□□□□□ -0.51
Nup88-203ENSMUST00000108531 Zfp707F6QUN2 391 aa11.86□□□□□ -0.51
Nup88-203ENSMUST00000108531 Slc16a5G5E8K6 468 aa11.86□□□□□ -0.51
Nup88-203ENSMUST00000108531 Tmem200cJ3QK46 637 aa11.86□□□□□ -0.51
Nup88-203ENSMUST00000108531 FxnO35943 207 aa11.86□□□□□ -0.51
Nup88-203ENSMUST00000108531 Pcdh12O55134 1180 aa11.86□□□□□ -0.51
Nup88-203ENSMUST00000108531 Ifi204P0DOV2 619 aa11.86□□□□□ -0.51
Nup88-203ENSMUST00000108531 Spi1P17433 272 aa11.86□□□□□ -0.51
Nup88-203ENSMUST00000108531 NcanP55066 1268 aa11.86□□□□□ -0.51
Nup88-203ENSMUST00000108531 Gnb5P62881 395 aa11.86□□□□□ -0.51
Nup88-203ENSMUST00000108531 Col19a1Q0VF58 1136 aa11.86□□□□□ -0.51
Nup88-203ENSMUST00000108531 Nxpe2Q3U095 558 aa11.86□□□□□ -0.51
Nup88-203ENSMUST00000108531 TifaQ793I8 184 aa11.86□□□□□ -0.51
Nup88-203ENSMUST00000108531 Arhgef4Q7TNR9 484 aa11.86□□□□□ -0.51
Nup88-203ENSMUST00000108531 Gpr119Q7TQP3 335 aa11.86□□□□□ -0.51
Nup88-203ENSMUST00000108531 Cpt1cQ8BGD5 798 aa11.86□□□□□ -0.51
Nup88-203ENSMUST00000108531 Clba1Q8BHN9 321 aa11.86□□□□□ -0.51
Nup88-203ENSMUST00000108531 DpcdQ8BPA8 203 aa11.86□□□□□ -0.51
Nup88-203ENSMUST00000108531 Acaa2Q8BWT1 397 aa11.86□□□□□ -0.51
Nup88-203ENSMUST00000108531 Ikzf4Q8C208 586 aa11.86□□□□□ -0.51
Nup88-203ENSMUST00000108531 GmdsQ8K0C9 372 aa11.86□□□□□ -0.51
Nup88-203ENSMUST00000108531 Mrpl38Q8K2M0 380 aa11.86□□□□□ -0.51
Nup88-203ENSMUST00000108531 Babam2Q8K3W0 383 aa11.86□□□□□ -0.51
Nup88-203ENSMUST00000108531 Rfc3Q8R323 356 aaKnown RBP11.86□□□□□ -0.51
Nup88-203ENSMUST00000108531 Olfr821Q8VG45 310 aa11.86□□□□□ -0.51
Nup88-203ENSMUST00000108531 Hcfc1r1Q9CYQ5 120 aa11.86□□□□□ -0.51
Nup88-203ENSMUST00000108531 Derl3Q9D8K3 228 aa11.86□□□□□ -0.51
Nup88-203ENSMUST00000108531 Q9D8N1 392 aa11.86□□□□□ -0.51
Nup88-203ENSMUST00000108531 Entpd4Q9DBT4 613 aa11.86□□□□□ -0.51
Nup88-203ENSMUST00000108531 Scamp2Q9ERN0 329 aa11.86□□□□□ -0.51
Nup88-203ENSMUST00000108531 Raet1dQ9JI58 249 aa11.86□□□□□ -0.51
Nup88-203ENSMUST00000108531 DiabloQ9JIQ3 237 aa11.86□□□□□ -0.51
Nup88-203ENSMUST00000108531 Tmem240B2RWJ3 173 aa11.85□□□□□ -0.51
Nup88-203ENSMUST00000108531 Gm9493F6SVV1 192 aaKnown RBP11.85□□□□□ -0.51
Nup88-203ENSMUST00000108531 CfpP11680 464 aa11.85□□□□□ -0.51
Nup88-203ENSMUST00000108531 Cd48P18181 240 aa11.85□□□□□ -0.51
Nup88-203ENSMUST00000108531 Hes5P70120 167 aa11.85□□□□□ -0.51
Nup88-203ENSMUST00000108531 Tbx4P70325 552 aa11.85□□□□□ -0.51
Retrieved 100 of 22,080 RNA–protein pairs in 39.1 ms