RNA–Protein interactions for RNA: ENST00000640289.1

GTF3A-209, Transcript of general transcription factor IIIA, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene GTF3A, Length 1,098 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-209ENST00000640289 NHLRC1Q6VVB1 395 aa11.7□□□□□ -0.54
GTF3A-209ENST00000640289 TMPRSS11FQ6ZWK6 438 aa11.7□□□□□ -0.54
GTF3A-209ENST00000640289 ZER1Q7Z7L7 766 aa11.7□□□□□ -0.54
GTF3A-209ENST00000640289 WDFY1Q8IWB7 410 aa11.7□□□□□ -0.54
GTF3A-209ENST00000640289 UEVLDQ8IX04 471 aa11.7□□□□□ -0.54
GTF3A-209ENST00000640289 CDK20Q8IZL9 346 aa11.7□□□□□ -0.54
GTF3A-209ENST00000640289 OR9Q2Q8NGE9 314 aa11.7□□□□□ -0.54
GTF3A-209ENST00000640289 OR13C2Q8NGS9 318 aa11.7□□□□□ -0.54
GTF3A-209ENST00000640289 OR51A7Q8NH64 312 aa11.7□□□□□ -0.54
GTF3A-209ENST00000640289 PYDC1Q8WXC3 89 aa11.7□□□□□ -0.54
GTF3A-209ENST00000640289 TMEM45BQ96B21 275 aa11.7□□□□□ -0.54
GTF3A-209ENST00000640289 DUS3LQ96G46 650 aaKnown RBP11.7□□□□□ -0.54
GTF3A-209ENST00000640289 TXNDC15Q96J42 360 aa11.7□□□□□ -0.54
GTF3A-209ENST00000640289 TNFRSF13CQ96RJ3 184 aa11.7□□□□□ -0.54
GTF3A-209ENST00000640289 YY1AP1Q9H869 796 aa11.7□□□□□ -0.54
GTF3A-209ENST00000640289 MED29Q9NX70 200 aa11.7□□□□□ -0.54
GTF3A-209ENST00000640289 PRSS50Q9UI38 385 aa11.7□□□□□ -0.54
GTF3A-209ENST00000640289 TMEM5Q9Y2B1 443 aa11.7□□□□□ -0.54
GTF3A-209ENST00000640289 AP4S1Q9Y587 144 aa11.7□□□□□ -0.54
GTF3A-209ENST00000640289 RP1L1Q8IWN7 2480 aaPredicted RBP11.7□□□□□ -0.54
GTF3A-209ENST00000640289 DOCK7Q96N67 2140 aa11.69□□□□□ -0.54
GTF3A-209ENST00000640289 LOC102725191A0A1B0GVB3 256 aa11.69□□□□□ -0.54
GTF3A-209ENST00000640289 HTR3EA5X5Y0 456 aa11.69□□□□□ -0.54
GTF3A-209ENST00000640289 PRSS44E7EML9 344 aa11.69□□□□□ -0.54
GTF3A-209ENST00000640289 CLOCKO15516 846 aa11.69□□□□□ -0.54
GTF3A-209ENST00000640289 KLF4O43474 513 aa11.69□□□□□ -0.54
GTF3A-209ENST00000640289 MRPL33O75394 65 aaKnown RBP11.69□□□□□ -0.54
GTF3A-209ENST00000640289 CCNB2O95067 398 aa11.69□□□□□ -0.54
GTF3A-209ENST00000640289 F13BP05160 661 aa11.69□□□□□ -0.54
GTF3A-209ENST00000640289 TSPAN19P0C672 248 aa11.69□□□□□ -0.54
GTF3A-209ENST00000640289 HOXB6P17509 224 aaKnown RBP11.69□□□□□ -0.54
GTF3A-209ENST00000640289 UQCRC1P31930 480 aa11.69□□□□□ -0.54
GTF3A-209ENST00000640289 OR3A2P47893 321 aa11.69□□□□□ -0.54
GTF3A-209ENST00000640289 SELENOPP49908 381 aa11.69□□□□□ -0.54
GTF3A-209ENST00000640289 SNTB1Q13884 538 aaKnown RBP11.69□□□□□ -0.54
GTF3A-209ENST00000640289 NIPAL3Q6P499 406 aa11.69□□□□□ -0.54
GTF3A-209ENST00000640289 AAED1Q7RTV5 226 aa11.69□□□□□ -0.54
GTF3A-209ENST00000640289 PXKQ7Z7A4 578 aa11.69□□□□□ -0.54
GTF3A-209ENST00000640289 OAFQ86UD1 273 aa11.69□□□□□ -0.54
GTF3A-209ENST00000640289 ZNF100Q8IYN0 542 aa11.69□□□□□ -0.54
GTF3A-209ENST00000640289 PSMG3-AS1Q96PY0 264 aa11.69□□□□□ -0.54
GTF3A-209ENST00000640289 EMC6Q9BV81 110 aa11.69□□□□□ -0.54
GTF3A-209ENST00000640289 RBM24Q9BX46 236 aaKnown RBP11.69□□□□□ -0.54
GTF3A-209ENST00000640289 KRCC1Q9NPI7 259 aaPredicted RBP11.69□□□□□ -0.54
GTF3A-209ENST00000640289 FANCFQ9NPI8 374 aa11.69□□□□□ -0.54
GTF3A-209ENST00000640289 NPDC1Q9NQX5 325 aaPredicted RBP11.69□□□□□ -0.54
GTF3A-209ENST00000640289 ARMC1Q9NVT9 282 aa11.69□□□□□ -0.54
GTF3A-209ENST00000640289 GALNT8Q9NY28 637 aa11.69□□□□□ -0.54
GTF3A-209ENST00000640289 DNAJB9Q9UBS3 223 aa11.69□□□□□ -0.54
GTF3A-209ENST00000640289 HIF3AQ9Y2N7 669 aa11.69□□□□□ -0.54
GTF3A-209ENST00000640289 MED12LQ86YW9 2145 aa11.68□□□□□ -0.54
GTF3A-209ENST00000640289 UNC119BA6NIH7 251 aa11.68□□□□□ -0.54
GTF3A-209ENST00000640289 ENTPD5O75356 428 aa11.68□□□□□ -0.54
GTF3A-209ENST00000640289 GASTP01350 101 aa11.68□□□□□ -0.54
GTF3A-209ENST00000640289 POU2F1P14859 743 aa11.68□□□□□ -0.54
GTF3A-209ENST00000640289 IFNGR1P15260 489 aa11.68□□□□□ -0.54
GTF3A-209ENST00000640289 ZNF26P17031 533 aaPredicted RBP11.68□□□□□ -0.54
GTF3A-209ENST00000640289 SLC9A3P48764 834 aa11.68□□□□□ -0.54
GTF3A-209ENST00000640289 FXYD6P3P58550 94 aa11.68□□□□□ -0.54
GTF3A-209ENST00000640289 RPS4XP62701 263 aaKnown RBP11.68□□□□□ -0.54
GTF3A-209ENST00000640289 LGALS3BPQ08380 585 aa11.68□□□□□ -0.54
GTF3A-209ENST00000640289 FAM27E3Q08E93 113 aa11.68□□□□□ -0.54
GTF3A-209ENST00000640289 MELKQ14680 651 aa11.68□□□□□ -0.54
GTF3A-209ENST00000640289 MICAQ29983 383 aa11.68□□□□□ -0.54
GTF3A-209ENST00000640289 ZBED5Q49AG3 693 aa11.68□□□□□ -0.54
GTF3A-209ENST00000640289 TSPO2Q5TGU0 170 aa11.68□□□□□ -0.54
GTF3A-209ENST00000640289 ZNF770Q6IQ21 691 aaPredicted RBP11.68□□□□□ -0.54
GTF3A-209ENST00000640289 C1orf94Q6P1W5 598 aa11.68□□□□□ -0.54
GTF3A-209ENST00000640289 SLC35D2Q76EJ3 337 aa11.68□□□□□ -0.54
GTF3A-209ENST00000640289 IGFN1Q86VF2 1251 aa11.68□□□□□ -0.54
GTF3A-209ENST00000640289 HS3ST5Q8IZT8 346 aa11.68□□□□□ -0.54
GTF3A-209ENST00000640289 LRRC75AQ8NAA5 344 aa11.68□□□□□ -0.54
GTF3A-209ENST00000640289 ANKK1Q8NFD2 765 aa11.68□□□□□ -0.54
GTF3A-209ENST00000640289 LRTOMTQ8WZ04 291 aa11.68□□□□□ -0.54
GTF3A-209ENST00000640289 APH1AQ96BI3 265 aa11.68□□□□□ -0.54
GTF3A-209ENST00000640289 NTN4Q9HB63 628 aa11.68□□□□□ -0.54
GTF3A-209ENST00000640289 MCCC2Q9HCC0 563 aa11.68□□□□□ -0.54
GTF3A-209ENST00000640289 SIGLEC7Q9Y286 467 aa11.68□□□□□ -0.54
GTF3A-209ENST00000640289 NOX1Q9Y5S8 564 aa11.68□□□□□ -0.54
GTF3A-209ENST00000640289 KLF2Q9Y5W3 355 aaPredicted RBP11.68□□□□□ -0.54
GTF3A-209ENST00000640289 MPDZO75970 2070 aa11.67□□□□□ -0.54
GTF3A-209ENST00000640289 SLC35F4A4IF30 521 aa11.67□□□□□ -0.54
GTF3A-209ENST00000640289 MCIDASD6RGH6 385 aa11.67□□□□□ -0.54
GTF3A-209ENST00000640289 H3BNX3 289 aa11.67□□□□□ -0.54
GTF3A-209ENST00000640289 HNRNPRO43390 633 aaKnown RBP11.67□□□□□ -0.54
GTF3A-209ENST00000640289 PTP4A3O75365 173 aa11.67□□□□□ -0.54
GTF3A-209ENST00000640289 E2F6O75461 281 aa11.67□□□□□ -0.54
GTF3A-209ENST00000640289 ZNF432O94892 652 aa11.67□□□□□ -0.54
GTF3A-209ENST00000640289 COL8A1P27658 744 aa11.67□□□□□ -0.54
GTF3A-209ENST00000640289 DNAJA1P31689 397 aaKnown RBP11.67□□□□□ -0.54
GTF3A-209ENST00000640289 GSSP48637 474 aa11.67□□□□□ -0.54
GTF3A-209ENST00000640289 FOXG1P55316 489 aaPredicted RBP11.67□□□□□ -0.54
GTF3A-209ENST00000640289 BIDP55957 195 aa11.67□□□□□ -0.54
GTF3A-209ENST00000640289 ATP6AP1Q15904 470 aa11.67□□□□□ -0.54
GTF3A-209ENST00000640289 FBXL19-AS1Q494R0 122 aa11.67□□□□□ -0.54
GTF3A-209ENST00000640289 ALG10Q5BKT4 473 aa11.67□□□□□ -0.54
GTF3A-209ENST00000640289 CARD17Q5XLA6 110 aa11.67□□□□□ -0.54
GTF3A-209ENST00000640289 HMBOX1Q6NT76 420 aa11.67□□□□□ -0.54
GTF3A-209ENST00000640289 BEND4Q6ZU67 534 aa11.67□□□□□ -0.54
GTF3A-209ENST00000640289 AMIGO2Q86SJ2 522 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms