RNA–Protein interactions for RNA: ENST00000639300.1

SCARB2-216, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 4,554 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-216ENST00000639300 TMED7-TICAM2A0A0A6YYA0 188 aa13.28□□□□□ -0.28
SCARB2-216ENST00000639300 MTRF1O75570 445 aaKnown RBP13.28□□□□□ -0.28
SCARB2-216ENST00000639300 UBL3O95164 117 aa13.28□□□□□ -0.28
SCARB2-216ENST00000639300 SERPINA5P05154 406 aa13.28□□□□□ -0.28
SCARB2-216ENST00000639300 ZNF806P0C7X5 589 aa13.28□□□□□ -0.28
SCARB2-216ENST00000639300 CSNK1A1P48729 337 aa13.28□□□□□ -0.28
SCARB2-216ENST00000639300 RRAS2P62070 204 aaPredicted RBP13.28□□□□□ -0.28
SCARB2-216ENST00000639300 EEF1A1P68104 462 aaKnown RBP13.28□□□□□ -0.28
SCARB2-216ENST00000639300 VWA2Q5GFL6 755 aa13.28□□□□□ -0.28
SCARB2-216ENST00000639300 EID2Q8N6I1 236 aa13.28□□□□□ -0.28
SCARB2-216ENST00000639300 MCOLN1Q9GZU1 580 aa13.28□□□□□ -0.28
SCARB2-216ENST00000639300 B4GALT7Q9UBV7 327 aa13.28□□□□□ -0.28
SCARB2-216ENST00000639300 TMED7Q9Y3B3 224 aa13.28□□□□□ -0.28
SCARB2-216ENST00000639300 HS3ST3A1Q9Y663 406 aa13.28□□□□□ -0.28
SCARB2-216ENST00000639300 PAPPA2Q9BXP8 1791 aa13.28□□□□□ -0.28
SCARB2-216ENST00000639300 SCN3AQ9NY46 2000 aa13.28□□□□□ -0.28
SCARB2-216ENST00000639300 A6NLC8 198 aa13.28□□□□□ -0.28
SCARB2-216ENST00000639300 TCRBP04435 133 aa13.28□□□□□ -0.28
SCARB2-216ENST00000639300 HIST1H1CP16403 213 aaKnown RBP13.28□□□□□ -0.28
SCARB2-216ENST00000639300 SRP9P49458 86 aaKnown RBP13.28□□□□□ -0.28
SCARB2-216ENST00000639300 CAPZA1P52907 286 aa13.28□□□□□ -0.28
SCARB2-216ENST00000639300 DHRS4L2Q6PKH6 230 aa13.28□□□□□ -0.28
SCARB2-216ENST00000639300 TSSK4Q6SA08 328 aa13.28□□□□□ -0.28
SCARB2-216ENST00000639300 VASH1Q7L8A9 365 aaPredicted RBP13.28□□□□□ -0.28
SCARB2-216ENST00000639300 PM20D2Q8IYS1 436 aa13.28□□□□□ -0.28
SCARB2-216ENST00000639300 RHBDD1Q8TEB9 315 aa13.28□□□□□ -0.28
SCARB2-216ENST00000639300 ATOH1Q92858 354 aaPredicted RBP13.28□□□□□ -0.28
SCARB2-216ENST00000639300 STACQ99469 402 aa13.28□□□□□ -0.28
SCARB2-216ENST00000639300 HOXB3P14651 431 aaPredicted RBP13.28□□□□□ -0.28
SCARB2-216ENST00000639300 FAM27D1Q5T7N8 215 aa13.28□□□□□ -0.28
SCARB2-216ENST00000639300 ESPNLQ6ZVH7 1005 aa13.28□□□□□ -0.28
SCARB2-216ENST00000639300 LINC01555Q8NAE3 123 aa13.28□□□□□ -0.28
SCARB2-216ENST00000639300 BAHD1Q8TBE0 780 aaPredicted RBP13.28□□□□□ -0.28
SCARB2-216ENST00000639300 OR2M2Q96R28 347 aa13.28□□□□□ -0.28
SCARB2-216ENST00000639300 FOCADQ5VW36 1801 aa13.28□□□□□ -0.28
SCARB2-216ENST00000639300 THBS1P07996 1170 aa13.27□□□□□ -0.28
SCARB2-216ENST00000639300 IL13RA1P78552 427 aa13.27□□□□□ -0.28
SCARB2-216ENST00000639300 FGL1Q08830 312 aa13.27□□□□□ -0.28
SCARB2-216ENST00000639300 SF3B4Q15427 424 aaKnown RBP eCLIP13.27□□□□□ -0.28
SCARB2-216ENST00000639300 PLEKHN1Q494U1 663 aaPredicted RBP13.27□□□□□ -0.28
SCARB2-216ENST00000639300 BEX5Q5H9J7 111 aa13.27□□□□□ -0.28
SCARB2-216ENST00000639300 BEND4Q6ZU67 534 aa13.27□□□□□ -0.28
SCARB2-216ENST00000639300 COMMD7Q86VX2 200 aa13.27□□□□□ -0.28
SCARB2-216ENST00000639300 BPIFB2Q8N4F0 458 aa13.27□□□□□ -0.28
SCARB2-216ENST00000639300 RCBTB1Q8NDN9 531 aa13.27□□□□□ -0.28
SCARB2-216ENST00000639300 OR13C5Q8NGS8 318 aa13.27□□□□□ -0.28
SCARB2-216ENST00000639300 UCN3Q969E3 161 aa13.27□□□□□ -0.28
SCARB2-216ENST00000639300 BORCS8Q96FH0 119 aa13.27□□□□□ -0.28
SCARB2-216ENST00000639300 SLC41A2Q96JW4 573 aa13.27□□□□□ -0.28
SCARB2-216ENST00000639300 NECAB3Q96P71 396 aaPredicted RBP13.27□□□□□ -0.28
SCARB2-216ENST00000639300 OR6C1Q96RD1 312 aa13.27□□□□□ -0.28
SCARB2-216ENST00000639300 APMAPQ9HDC9 416 aa13.27□□□□□ -0.28
SCARB2-216ENST00000639300 SLAMF7Q9NQ25 335 aa13.27□□□□□ -0.28
SCARB2-216ENST00000639300 PRDM7Q9NQW5 492 aa13.27□□□□□ -0.28
SCARB2-216ENST00000639300 MMP17Q9ULZ9 603 aa13.27□□□□□ -0.28
SCARB2-216ENST00000639300 EMC9Q9Y3B6 208 aa13.27□□□□□ -0.28
SCARB2-216ENST00000639300 CACNA1EQ15878 2313 aa13.27□□□□□ -0.28
SCARB2-216ENST00000639300 POM121CA8CG34 1229 aa13.27□□□□□ -0.28
SCARB2-216ENST00000639300 NUPL2O15504 423 aaKnown RBP13.27□□□□□ -0.28
SCARB2-216ENST00000639300 NUDT21O43809 227 aaKnown RBP13.27□□□□□ -0.28
SCARB2-216ENST00000639300 WDPCPO95876 746 aa13.27□□□□□ -0.28
SCARB2-216ENST00000639300 CISD3P0C7P0 127 aa13.27□□□□□ -0.28
SCARB2-216ENST00000639300 PET100P0DJ07 73 aa13.27□□□□□ -0.28
SCARB2-216ENST00000639300 HSD17B7P56937 341 aa13.27□□□□□ -0.28
SCARB2-216ENST00000639300 GLYR1Q49A26 553 aaPredicted RBP13.27□□□□□ -0.28
SCARB2-216ENST00000639300 ABHD17BQ5VST6 288 aa13.27□□□□□ -0.28
SCARB2-216ENST00000639300 KLHDC8BQ8IXV7 354 aa13.27□□□□□ -0.28
SCARB2-216ENST00000639300 ZNF611Q8N823 705 aa13.27□□□□□ -0.28
SCARB2-216ENST00000639300 GPR32P1Q8NGA4 272 aa13.27□□□□□ -0.28
SCARB2-216ENST00000639300 OR14A16Q8NHC5 309 aa13.27□□□□□ -0.28
SCARB2-216ENST00000639300 CD300LFQ8TDQ1 290 aa13.27□□□□□ -0.28
SCARB2-216ENST00000639300 C7orf50Q9BRJ6 194 aaKnown RBP13.27□□□□□ -0.28
SCARB2-216ENST00000639300 CMC2Q9NRP2 79 aa13.27□□□□□ -0.28
SCARB2-216ENST00000639300 ACOXLQ9NUZ1 547 aa13.27□□□□□ -0.28
SCARB2-216ENST00000639300 FAM230AA0A1W2PPH8 454 aa13.27□□□□□ -0.29
SCARB2-216ENST00000639300 PEX14O75381 377 aa13.27□□□□□ -0.29
SCARB2-216ENST00000639300 ELK1P19419 428 aa13.27□□□□□ -0.29
SCARB2-216ENST00000639300 EVI2BP34910 448 aa13.27□□□□□ -0.29
SCARB2-216ENST00000639300 VEGFCP49767 419 aa13.27□□□□□ -0.29
SCARB2-216ENST00000639300 SLC26A5P58743 744 aa13.27□□□□□ -0.29
SCARB2-216ENST00000639300 DUSP8Q13202 625 aa13.27□□□□□ -0.29
SCARB2-216ENST00000639300 TCTN1Q2MV58 587 aa13.27□□□□□ -0.29
SCARB2-216ENST00000639300 TMPPEQ6ZT21 453 aa13.27□□□□□ -0.29
SCARB2-216ENST00000639300 OR5D18Q8NGL1 313 aa13.27□□□□□ -0.29
SCARB2-216ENST00000639300 PHB2Q99623 299 aa13.27□□□□□ -0.29
SCARB2-216ENST00000639300 NDUFB11Q9NX14 153 aa13.27□□□□□ -0.29
SCARB2-216ENST00000639300 M0R082 166 aa13.27□□□□□ -0.29
SCARB2-216ENST00000639300 HYAL3O43820 417 aaPredicted RBP13.27□□□□□ -0.29
SCARB2-216ENST00000639300 MANEAQ5SRI9 462 aa13.27□□□□□ -0.29
SCARB2-216ENST00000639300 GLB1L2Q8IW92 636 aa13.27□□□□□ -0.29
SCARB2-216ENST00000639300 SLC7A6Q92536 515 aa13.27□□□□□ -0.29
SCARB2-216ENST00000639300 ZC3H10Q96K80 434 aaKnown RBP13.27□□□□□ -0.29
SCARB2-216ENST00000639300 CDC6Q99741 560 aa13.27□□□□□ -0.29
SCARB2-216ENST00000639300 CTRCQ99895 268 aa13.27□□□□□ -0.29
SCARB2-216ENST00000639300 LIN7BQ9HAP6 207 aa13.27□□□□□ -0.29
SCARB2-216ENST00000639300 MUTYHQ9UIF7 546 aa13.27□□□□□ -0.29
SCARB2-216ENST00000639300 SLC6A14Q9UN76 642 aa13.27□□□□□ -0.29
SCARB2-216ENST00000639300 MOKQ9UQ07 419 aa13.27□□□□□ -0.29
SCARB2-216ENST00000639300 CCL27Q9Y4X3 112 aa13.27□□□□□ -0.29
SCARB2-216ENST00000639300 TRABD2BA6NFA1 517 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms