RNA–Protein interactions for RNA: ENST00000639290.1

CCDC7-213, Transcript of coiled-coil domain containing 7, humanhuman

TSL 1 (best)

Gene CCDC7, Length 2,542 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-213ENST00000639290 RPS6KA3P51812 740 aa2.82□□□□□ -1.96
CCDC7-213ENST00000639290 RAP2BP61225 183 aa2.82□□□□□ -1.96
CCDC7-213ENST00000639290 ALKBH1Q13686 389 aaKnown RBP2.82□□□□□ -1.96
CCDC7-213ENST00000639290 EBPQ15125 230 aaKnown RBP2.82□□□□□ -1.96
CCDC7-213ENST00000639290 TRIP13Q15645 432 aaPredicted RBP2.82□□□□□ -1.96
CCDC7-213ENST00000639290 SLC18A3Q16572 532 aa2.82□□□□□ -1.96
CCDC7-213ENST00000639290 KIAA2026Q5HYC2 2103 aa2.82□□□□□ -1.96
CCDC7-213ENST00000639290 OTUD3Q5T2D3 398 aaPredicted RBP2.82□□□□□ -1.96
CCDC7-213ENST00000639290 GJB7Q6PEY0 223 aa2.82□□□□□ -1.96
CCDC7-213ENST00000639290 PIWIL4Q7Z3Z4 852 aaKnown RBP2.82□□□□□ -1.96
CCDC7-213ENST00000639290 CARM1Q86X55 608 aa2.82□□□□□ -1.96
CCDC7-213ENST00000639290 SLC15A3Q8IY34 581 aa2.82□□□□□ -1.96
CCDC7-213ENST00000639290 ZDHHC23Q8IYP9 409 aa2.82□□□□□ -1.96
CCDC7-213ENST00000639290 LYPD1Q8N2G4 141 aa2.82□□□□□ -1.96
CCDC7-213ENST00000639290 KDM8Q8N371 416 aa2.82□□□□□ -1.96
CCDC7-213ENST00000639290 WDR31Q8NA23 367 aa2.82□□□□□ -1.96
CCDC7-213ENST00000639290 OR5T3Q8NGG3 340 aa2.82□□□□□ -1.96
CCDC7-213ENST00000639290 ANKRD49Q8WVL7 239 aa2.82□□□□□ -1.96
CCDC7-213ENST00000639290 ALG3Q92685 438 aa2.82□□□□□ -1.96
CCDC7-213ENST00000639290 SLC7A6OSQ96CW6 309 aaPredicted RBP2.82□□□□□ -1.96
CCDC7-213ENST00000639290 ELMOD3Q96FG2 381 aa2.82□□□□□ -1.96
CCDC7-213ENST00000639290 DUS3LQ96G46 650 aaKnown RBP2.82□□□□□ -1.96
CCDC7-213ENST00000639290 C16orf58Q96GQ5 468 aa2.82□□□□□ -1.96
CCDC7-213ENST00000639290 IL17FQ96PD4 163 aa2.82□□□□□ -1.96
CCDC7-213ENST00000639290 ZNF350Q9GZX5 532 aa2.82□□□□□ -1.96
CCDC7-213ENST00000639290 HIPK2Q9H2X6 1198 aa2.82□□□□□ -1.96
CCDC7-213ENST00000639290 PRDM7Q9NQW5 492 aa2.82□□□□□ -1.96
CCDC7-213ENST00000639290 ZFP57Q9NU63 452 aa2.82□□□□□ -1.96
CCDC7-213ENST00000639290 SERTAD4Q9NUC0 356 aa2.82□□□□□ -1.96
CCDC7-213ENST00000639290 SLAMF8Q9P0V8 285 aa2.82□□□□□ -1.96
CCDC7-213ENST00000639290 A4GNTQ9UNA3 340 aa2.82□□□□□ -1.96
CCDC7-213ENST00000639290 REXO2Q9Y3B8 237 aaKnown RBP2.82□□□□□ -1.96
CCDC7-213ENST00000639290 MAB21L2Q9Y586 359 aa2.82□□□□□ -1.96
CCDC7-213ENST00000639290 A0A087WZY1 265 aa2.81□□□□□ -1.96
CCDC7-213ENST00000639290 IGHV1-69DA0A0B4J2H0 117 aa2.81□□□□□ -1.96
CCDC7-213ENST00000639290 SLC22A23A1A5C7 686 aa2.81□□□□□ -1.96
CCDC7-213ENST00000639290 C3orf70A6NLC5 250 aaPredicted RBP2.81□□□□□ -1.96
CCDC7-213ENST00000639290 TRIM49D1C9J1S8 452 aa2.81□□□□□ -1.96
CCDC7-213ENST00000639290 CETN3O15182 167 aa2.81□□□□□ -1.96
CCDC7-213ENST00000639290 ACOX3O15254 700 aa2.81□□□□□ -1.96
CCDC7-213ENST00000639290 STX7O15400 261 aaKnown RBP2.81□□□□□ -1.96
CCDC7-213ENST00000639290 C1orf105O95561 183 aa2.81□□□□□ -1.96
CCDC7-213ENST00000639290 IGHV1-69P01742 117 aa2.81□□□□□ -1.96
CCDC7-213ENST00000639290 IFNA16P05015 189 aa2.81□□□□□ -1.96
CCDC7-213ENST00000639290 LIPFP07098 398 aa2.81□□□□□ -1.96
CCDC7-213ENST00000639290 ETS1P14921 441 aa2.81□□□□□ -1.96
CCDC7-213ENST00000639290 PPP2R1BP30154 601 aa2.81□□□□□ -1.96
CCDC7-213ENST00000639290 FMO5P49326 533 aa2.81□□□□□ -1.96
CCDC7-213ENST00000639290 CLK3P49761 638 aaKnown RBP2.81□□□□□ -1.96
CCDC7-213ENST00000639290 F2RL1P55085 397 aa2.81□□□□□ -1.96
CCDC7-213ENST00000639290 RPS13P62277 151 aaKnown RBP2.81□□□□□ -1.96
CCDC7-213ENST00000639290 TGFBR3Q03167 851 aa2.81□□□□□ -1.96
CCDC7-213ENST00000639290 ME3Q16798 604 aa2.81□□□□□ -1.96
CCDC7-213ENST00000639290 CDO1Q16878 200 aa2.81□□□□□ -1.96
CCDC7-213ENST00000639290 ESCO2Q56NI9 601 aa2.81□□□□□ -1.96
CCDC7-213ENST00000639290 IL23RQ5VWK5 629 aa2.81□□□□□ -1.96
CCDC7-213ENST00000639290 FBXW9Q5XUX1 488 aa2.81□□□□□ -1.96
CCDC7-213ENST00000639290 C6orf89Q6UWU4 347 aa2.81□□□□□ -1.96
CCDC7-213ENST00000639290 CFAP77Q6ZQR2 320 aa2.81□□□□□ -1.96
CCDC7-213ENST00000639290 PTCHD4Q6ZW05 846 aa2.81□□□□□ -1.96
CCDC7-213ENST00000639290 TIGD4Q8IY51 512 aa2.81□□□□□ -1.96
CCDC7-213ENST00000639290 LYG1Q8N1E2 194 aa2.81□□□□□ -1.96
CCDC7-213ENST00000639290 C11orf44Q8N8P7 122 aa2.81□□□□□ -1.96
CCDC7-213ENST00000639290 OR56B2PQ8NGI1 322 aa2.81□□□□□ -1.96
CCDC7-213ENST00000639290 OR2V1Q8NHB1 315 aa2.81□□□□□ -1.96
CCDC7-213ENST00000639290 MAGEE2Q8TD90 523 aaPredicted RBP2.81□□□□□ -1.96
CCDC7-213ENST00000639290 HES6Q96HZ4 224 aa2.81□□□□□ -1.96
CCDC7-213ENST00000639290 EPSTI1Q96J88 318 aa2.81□□□□□ -1.96
CCDC7-213ENST00000639290 FOPNLQ96NB1 174 aa2.81□□□□□ -1.96
CCDC7-213ENST00000639290 GPR21Q99679 349 aa2.81□□□□□ -1.96
CCDC7-213ENST00000639290 H2AFJQ9BTM1 129 aa2.81□□□□□ -1.96
CCDC7-213ENST00000639290 FAM234AQ9H0X4 552 aa2.81□□□□□ -1.96
CCDC7-213ENST00000639290 SLC25A51Q9H1U9 297 aa2.81□□□□□ -1.96
CCDC7-213ENST00000639290 FAM114A2Q9NRY5 505 aa2.81□□□□□ -1.96
CCDC7-213ENST00000639290 HAO2Q9NYQ3 351 aa2.81□□□□□ -1.96
CCDC7-213ENST00000639290 KLHL9Q9P2J3 617 aa2.81□□□□□ -1.96
CCDC7-213ENST00000639290 FAM153AQ9UHL3 310 aa2.81□□□□□ -1.96
CCDC7-213ENST00000639290 AMFRQ9UKV5 643 aa2.81□□□□□ -1.96
CCDC7-213ENST00000639290 NDRG4Q9ULP0 352 aaKnown RBP2.81□□□□□ -1.96
CCDC7-213ENST00000639290 GIMAP1-GIMAP5A0A087WTJ2 511 aa2.81□□□□□ -1.96
CCDC7-213ENST00000639290 ARPC4-TTLL3A0A0A6YYG9 625 aa2.81□□□□□ -1.96
CCDC7-213ENST00000639290 LOC285095A0A1B0GVY8 99 aa2.81□□□□□ -1.96
CCDC7-213ENST00000639290 CIB4A0PJX0 185 aa2.81□□□□□ -1.96
CCDC7-213ENST00000639290 NPIPB13A6NJU9 1138 aa2.81□□□□□ -1.96
CCDC7-213ENST00000639290 NPIPB5A8MRT5 1133 aa2.81□□□□□ -1.96
CCDC7-213ENST00000639290 B5MCH6 92 aa2.81□□□□□ -1.96
CCDC7-213ENST00000639290 NPIPB4C9JG80 1138 aa2.81□□□□□ -1.96
CCDC7-213ENST00000639290 RAD51CO43502 376 aa2.81□□□□□ -1.96
CCDC7-213ENST00000639290 TRIM13O60858 407 aa2.81□□□□□ -1.96
CCDC7-213ENST00000639290 RSL1D1O76021 490 aaKnown RBP2.81□□□□□ -1.96
CCDC7-213ENST00000639290 SEMA3DO95025 777 aa2.81□□□□□ -1.96
CCDC7-213ENST00000639290 IGLV1-44P01699 117 aa2.81□□□□□ -1.96
CCDC7-213ENST00000639290 FAM58BPP0C7Q3 252 aa2.81□□□□□ -1.96
CCDC7-213ENST00000639290 TMEM225BP0DP42 221 aa2.81□□□□□ -1.96
CCDC7-213ENST00000639290 AHCYP23526 432 aa2.81□□□□□ -1.96
CCDC7-213ENST00000639290 PSMB4P28070 264 aa2.81□□□□□ -1.96
CCDC7-213ENST00000639290 GSTM2P28161 218 aa2.81□□□□□ -1.96
CCDC7-213ENST00000639290 SHC1P29353 583 aa2.81□□□□□ -1.96
CCDC7-213ENST00000639290 TYK2P29597 1187 aa2.81□□□□□ -1.96
CCDC7-213ENST00000639290 PPIFP30405 207 aaKnown RBP2.81□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms