RNA–Protein interactions for RNA: ENST00000638959.1

LMBR1-222, Transcript of limb development membrane protein 1, humanhuman

TSL 5 BASIC

Gene LMBR1, Length 93 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMBR1-222ENST00000638959 NAA38Q9BRA0 125 aaKnown RBP-1.08□□□□□ -2.58
LMBR1-222ENST00000638959 CACNG6Q9BXT2 260 aa-1.08□□□□□ -2.58
LMBR1-222ENST00000638959 DUSP16Q9BY84 665 aa-1.08□□□□□ -2.58
LMBR1-222ENST00000638959 FOLH1BQ9HBA9 442 aa-1.08□□□□□ -2.58
LMBR1-222ENST00000638959 PALMDQ9NP74 551 aa-1.08□□□□□ -2.58
LMBR1-222ENST00000638959 HOXC10Q9NYD6 342 aa-1.08□□□□□ -2.58
LMBR1-222ENST00000638959 UTP6Q9NYH9 597 aaKnown RBP-1.08□□□□□ -2.58
LMBR1-222ENST00000638959 CTSFQ9UBX1 484 aa-1.08□□□□□ -2.58
LMBR1-222ENST00000638959 MUC12Q9UKN1 5478 aa-1.08□□□□□ -2.58
LMBR1-222ENST00000638959 ANKRD17O75179 2603 aaKnown RBP-1.09□□□□□ -2.58
LMBR1-222ENST00000638959 MYBPHLA2RUH7 354 aa-1.09□□□□□ -2.58
LMBR1-222ENST00000638959 VSTM2BA6NLU5 285 aa-1.09□□□□□ -2.58
LMBR1-222ENST00000638959 C12orf77C9JDV5 145 aa-1.09□□□□□ -2.58
LMBR1-222ENST00000638959 E7ESA3 106 aa-1.09□□□□□ -2.58
LMBR1-222ENST00000638959 H0YJW9 148 aa-1.09□□□□□ -2.58
LMBR1-222ENST00000638959 KMOO15229 486 aa-1.09□□□□□ -2.58
LMBR1-222ENST00000638959 CRCPO75575 148 aa-1.09□□□□□ -2.58
LMBR1-222ENST00000638959 SCELO95171 688 aa-1.09□□□□□ -2.58
LMBR1-222ENST00000638959 RAB36O95755 333 aa-1.09□□□□□ -2.58
LMBR1-222ENST00000638959 TSPAN13O95857 204 aa-1.09□□□□□ -2.58
LMBR1-222ENST00000638959 ZFYP08048 801 aaPredicted RBP-1.09□□□□□ -2.58
LMBR1-222ENST00000638959 PDHBP11177 359 aa-1.09□□□□□ -2.58
LMBR1-222ENST00000638959 CALB2P22676 271 aa-1.09□□□□□ -2.58
LMBR1-222ENST00000638959 CMA1P23946 247 aa-1.09□□□□□ -2.58
LMBR1-222ENST00000638959 CTNNB1P35222 781 aa-1.09□□□□□ -2.58
LMBR1-222ENST00000638959 HTR5AP47898 357 aa-1.09□□□□□ -2.58
LMBR1-222ENST00000638959 TPMTP51580 245 aa-1.09□□□□□ -2.58
LMBR1-222ENST00000638959 UBE2E1P51965 193 aa-1.09□□□□□ -2.58
LMBR1-222ENST00000638959 HERVK_113P63132 956 aa-1.09□□□□□ -2.58
LMBR1-222ENST00000638959 ERVK-8P63133 956 aa-1.09□□□□□ -2.58
LMBR1-222ENST00000638959 ST3GAL4Q11206 333 aa-1.09□□□□□ -2.58
LMBR1-222ENST00000638959 RIPK1Q13546 671 aa-1.09□□□□□ -2.58
LMBR1-222ENST00000638959 POU2AF1Q16633 256 aa-1.09□□□□□ -2.58
LMBR1-222ENST00000638959 TIGITQ495A1 244 aa-1.09□□□□□ -2.58
LMBR1-222ENST00000638959 MED27Q6P2C8 311 aa-1.09□□□□□ -2.58
LMBR1-222ENST00000638959 NEK5Q6P3R8 708 aa-1.09□□□□□ -2.58
LMBR1-222ENST00000638959 LINC00173Q6ZV60 143 aa-1.09□□□□□ -2.58
LMBR1-222ENST00000638959 RABEPKQ7Z6M1 372 aa-1.09□□□□□ -2.58
LMBR1-222ENST00000638959 SLC26A11Q86WA9 606 aa-1.09□□□□□ -2.58
LMBR1-222ENST00000638959 WDFY1Q8IWB7 410 aa-1.09□□□□□ -2.58
LMBR1-222ENST00000638959 TMEM256Q8N2U0 113 aa-1.09□□□□□ -2.58
LMBR1-222ENST00000638959 MREGQ8N565 214 aa-1.09□□□□□ -2.58
LMBR1-222ENST00000638959 WDR36Q8NI36 951 aaKnown RBP-1.09□□□□□ -2.58
LMBR1-222ENST00000638959 TCTEX1D2Q8WW35 142 aa-1.09□□□□□ -2.58
LMBR1-222ENST00000638959 FER1L6-AS2Q96M78 137 aa-1.09□□□□□ -2.58
LMBR1-222ENST00000638959 MLPHQ9BV36 600 aaPredicted RBP-1.09□□□□□ -2.58
LMBR1-222ENST00000638959 ERVK-6Q9BXR3 956 aa-1.09□□□□□ -2.58
LMBR1-222ENST00000638959 SUDS3Q9H7L9 328 aaPredicted RBP-1.09□□□□□ -2.58
LMBR1-222ENST00000638959 C21orf62Q9NYP8 219 aa-1.09□□□□□ -2.58
LMBR1-222ENST00000638959 GPR34Q9UPC5 381 aa-1.09□□□□□ -2.58
LMBR1-222ENST00000638959 SOX21Q9Y651 276 aaPredicted RBP-1.09□□□□□ -2.58
LMBR1-222ENST00000638959 RGS12O14924 1447 aa-1.09□□□□□ -2.58
LMBR1-222ENST00000638959 ATP10DQ9P241 1426 aa-1.09□□□□□ -2.58
LMBR1-222ENST00000638959 WDR62O43379 1518 aa-1.1□□□□□ -2.58
LMBR1-222ENST00000638959 IGKV1D-42A0A075B6H8 117 aa-1.1□□□□□ -2.59
LMBR1-222ENST00000638959 ARHGEF37A1IGU5 675 aa-1.1□□□□□ -2.59
LMBR1-222ENST00000638959 LY6LH3BQJ8 138 aa-1.1□□□□□ -2.59
LMBR1-222ENST00000638959 PRKYO43930 277 aa-1.1□□□□□ -2.59
LMBR1-222ENST00000638959 STX11O75558 287 aa-1.1□□□□□ -2.59
LMBR1-222ENST00000638959 GH1P01241 217 aa-1.1□□□□□ -2.59
LMBR1-222ENST00000638959 HBQ1P09105 142 aa-1.1□□□□□ -2.59
LMBR1-222ENST00000638959 HOXB8P17481 243 aaPredicted RBP-1.1□□□□□ -2.59
LMBR1-222ENST00000638959 CAPN3P20807 821 aa-1.1□□□□□ -2.59
LMBR1-222ENST00000638959 DTYMKP23919 212 aa-1.1□□□□□ -2.59
LMBR1-222ENST00000638959 OTX1P32242 354 aaPredicted RBP-1.1□□□□□ -2.59
LMBR1-222ENST00000638959 LEPP41159 167 aa-1.1□□□□□ -2.59
LMBR1-222ENST00000638959 TMED10P49755 219 aaKnown RBP-1.1□□□□□ -2.59
LMBR1-222ENST00000638959 PRKXP51817 358 aa-1.1□□□□□ -2.59
LMBR1-222ENST00000638959 HNRNPFP52597 415 aaKnown RBP-1.1□□□□□ -2.59
LMBR1-222ENST00000638959 CASP9P55211 416 aa-1.1□□□□□ -2.59
LMBR1-222ENST00000638959 IFI35P80217 286 aaPredicted RBP-1.1□□□□□ -2.59
LMBR1-222ENST00000638959 MGAT3Q09327 533 aa-1.1□□□□□ -2.59
LMBR1-222ENST00000638959 SMU1Q2TAY7 513 aa-1.1□□□□□ -2.59
LMBR1-222ENST00000638959 SP6Q3SY56 376 aa-1.1□□□□□ -2.59
LMBR1-222ENST00000638959 BCL7AQ4VC05 210 aa-1.1□□□□□ -2.59
LMBR1-222ENST00000638959 GPRC6AQ5T6X5 926 aa-1.1□□□□□ -2.59
LMBR1-222ENST00000638959 ATL3Q6DD88 541 aa-1.1□□□□□ -2.59
LMBR1-222ENST00000638959 TMEM205Q6UW68 189 aa-1.1□□□□□ -2.59
LMBR1-222ENST00000638959 GOLGA7Q7Z5G4 137 aa-1.1□□□□□ -2.59
LMBR1-222ENST00000638959 KLHL7Q8IXQ5 586 aa-1.1□□□□□ -2.59
LMBR1-222ENST00000638959 ARFGAP2Q8N6H7 521 aa-1.1□□□□□ -2.59
LMBR1-222ENST00000638959 SNX31Q8N9S9 440 aa-1.1□□□□□ -2.59
LMBR1-222ENST00000638959 LMX1AQ8TE12 382 aa-1.1□□□□□ -2.59
LMBR1-222ENST00000638959 GEMIN6Q8WXD5 167 aaKnown RBP-1.1□□□□□ -2.59
LMBR1-222ENST00000638959 ACOT11Q8WXI4 607 aaPredicted RBP-1.1□□□□□ -2.59
LMBR1-222ENST00000638959 FGF11Q92914 225 aa-1.1□□□□□ -2.59
LMBR1-222ENST00000638959 RBBP8Q99708 897 aa-1.1□□□□□ -2.59
LMBR1-222ENST00000638959 RIOK2Q9BVS4 552 aaKnown RBP-1.1□□□□□ -2.59
LMBR1-222ENST00000638959 GABARAPL3Q9BY60 117 aa-1.1□□□□□ -2.59
LMBR1-222ENST00000638959 RNF167Q9H6Y7 350 aa-1.1□□□□□ -2.59
LMBR1-222ENST00000638959 MTCH1Q9NZJ7 389 aa-1.1□□□□□ -2.59
LMBR1-222ENST00000638959 IKZF2Q9UKS7 526 aa-1.1□□□□□ -2.59
LMBR1-222ENST00000638959 OR10H1Q9Y4A9 318 aa-1.1□□□□□ -2.59
LMBR1-222ENST00000638959 NAV3Q8IVL0 2385 aa-1.11□□□□□ -2.59
LMBR1-222ENST00000638959 UGT1A9O60656 530 aa-1.11□□□□□ -2.59
LMBR1-222ENST00000638959 SYNGR4O95473 234 aa-1.11□□□□□ -2.59
LMBR1-222ENST00000638959 GZMAP12544 262 aa-1.11□□□□□ -2.59
LMBR1-222ENST00000638959 PTAFRP25105 342 aa-1.11□□□□□ -2.59
LMBR1-222ENST00000638959 ADRA1AP35348 466 aa-1.11□□□□□ -2.59
LMBR1-222ENST00000638959 LGALS7P47929 136 aa-1.11□□□□□ -2.59
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms