RNA–Protein interactions for RNA: ENST00000638372.1

SCARB2-208, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 4,811 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-208ENST00000638372 HCCSP53701 268 aa13.22□□□□□ -0.29
SCARB2-208ENST00000638372 ARHGAP11BQ3KRB8 267 aa13.22□□□□□ -0.29
SCARB2-208ENST00000638372 ZNF620Q6ZNG0 422 aa13.22□□□□□ -0.29
SCARB2-208ENST00000638372 FAM26EQ8N5C1 309 aa13.22□□□□□ -0.29
SCARB2-208ENST00000638372 CDH20Q9HBT6 801 aa13.22□□□□□ -0.29
SCARB2-208ENST00000638372 RANGRFQ9HD47 186 aaPredicted RBP13.22□□□□□ -0.29
SCARB2-208ENST00000638372 WSB2Q9NYS7 404 aaPredicted RBP13.22□□□□□ -0.29
SCARB2-208ENST00000638372 MOKQ9UQ07 419 aa13.22□□□□□ -0.29
SCARB2-208ENST00000638372 EMC9Q9Y3B6 208 aa13.22□□□□□ -0.29
SCARB2-208ENST00000638372 PPIL1Q9Y3C6 166 aa13.22□□□□□ -0.29
SCARB2-208ENST00000638372 BORCS7-ASMTA0A0B4J1R7 106 aa13.22□□□□□ -0.29
SCARB2-208ENST00000638372 MAGEB4O15481 346 aaPredicted RBP13.22□□□□□ -0.29
SCARB2-208ENST00000638372 DPP4P27487 766 aa13.22□□□□□ -0.29
SCARB2-208ENST00000638372 AKR1C2P52895 323 aa13.22□□□□□ -0.29
SCARB2-208ENST00000638372 IHHQ14623 411 aa13.22□□□□□ -0.29
SCARB2-208ENST00000638372 ELAVL1Q15717 326 aaKnown RBP13.22□□□□□ -0.29
SCARB2-208ENST00000638372 STK11Q15831 433 aa13.22□□□□□ -0.29
SCARB2-208ENST00000638372 ZMAT1Q5H9K5 638 aa13.22□□□□□ -0.29
SCARB2-208ENST00000638372 C3orf33Q6P1S2 294 aa13.22□□□□□ -0.29
SCARB2-208ENST00000638372 SFTPA1Q8IWL2 248 aa13.22□□□□□ -0.29
SCARB2-208ENST00000638372 NANOGP1Q8N7R0 232 aa13.22□□□□□ -0.29
SCARB2-208ENST00000638372 CD300LFQ8TDQ1 290 aa13.22□□□□□ -0.29
SCARB2-208ENST00000638372 ZFPM2Q8WW38 1151 aa13.22□□□□□ -0.29
SCARB2-208ENST00000638372 ASB17Q8WXJ9 295 aa13.22□□□□□ -0.29
SCARB2-208ENST00000638372 ZMAT3Q9HA38 289 aaKnown RBP13.22□□□□□ -0.29
SCARB2-208ENST00000638372 CACNA1EQ15878 2313 aa13.22□□□□□ -0.29
SCARB2-208ENST00000638372 DLEC1Q9Y238 1755 aa13.22□□□□□ -0.29
SCARB2-208ENST00000638372 A0A1W2PPC4 97 aa13.22□□□□□ -0.29
SCARB2-208ENST00000638372 OR7A10O76100 309 aa13.22□□□□□ -0.29
SCARB2-208ENST00000638372 SERPINA2P20848 420 aa13.22□□□□□ -0.29
SCARB2-208ENST00000638372 MRPS10P82664 201 aaKnown RBP13.22□□□□□ -0.29
SCARB2-208ENST00000638372 ARL6IP1Q15041 203 aa13.22□□□□□ -0.29
SCARB2-208ENST00000638372 C16orf52Q8NHV5 167 aa13.22□□□□□ -0.29
SCARB2-208ENST00000638372 OR10A2Q9H208 303 aa13.22□□□□□ -0.29
SCARB2-208ENST00000638372 C1orf198Q9H425 327 aa13.22□□□□□ -0.29
SCARB2-208ENST00000638372 MSX1P28360 303 aa13.22□□□□□ -0.29
SCARB2-208ENST00000638372 RPS27P42677 84 aaKnown RBP13.22□□□□□ -0.29
SCARB2-208ENST00000638372 FGL1Q08830 312 aa13.22□□□□□ -0.29
SCARB2-208ENST00000638372 Q499Y3 187 aa13.22□□□□□ -0.29
SCARB2-208ENST00000638372 LYPD4Q6UWN0 246 aa13.22□□□□□ -0.29
SCARB2-208ENST00000638372 OR52N1Q8NH53 320 aa13.22□□□□□ -0.29
SCARB2-208ENST00000638372 ZNF707Q96C28 371 aaPredicted RBP13.22□□□□□ -0.29
SCARB2-208ENST00000638372 KCTD12Q96CX2 325 aaKnown RBP13.22□□□□□ -0.29
SCARB2-208ENST00000638372 SGCZQ96LD1 299 aa13.22□□□□□ -0.29
SCARB2-208ENST00000638372 PHB2Q99623 299 aa13.22□□□□□ -0.29
SCARB2-208ENST00000638372 EMC6Q9BV81 110 aa13.22□□□□□ -0.29
SCARB2-208ENST00000638372 TCEAL2Q9H3H9 227 aaPredicted RBP13.22□□□□□ -0.29
SCARB2-208ENST00000638372 NRIP3Q9NQ35 241 aa13.22□□□□□ -0.29
SCARB2-208ENST00000638372 MBD1Q9UIS9 605 aaPredicted RBP13.22□□□□□ -0.29
SCARB2-208ENST00000638372 SLC17A4Q9Y2C5 497 aa13.22□□□□□ -0.29
SCARB2-208ENST00000638372 ZNF175Q9Y473 711 aa13.22□□□□□ -0.29
SCARB2-208ENST00000638372 APEHP13798 732 aaKnown RBP13.21□□□□□ -0.29
SCARB2-208ENST00000638372 FAM69AQ5T7M9 428 aa13.21□□□□□ -0.29
SCARB2-208ENST00000638372 TMEM99Q8N816 258 aa13.21□□□□□ -0.29
SCARB2-208ENST00000638372 OR1J4Q8NGS1 313 aa13.21□□□□□ -0.29
SCARB2-208ENST00000638372 SMAP2Q8WU79 429 aaPredicted RBP13.21□□□□□ -0.29
SCARB2-208ENST00000638372 WDR76Q9H967 626 aa13.21□□□□□ -0.29
SCARB2-208ENST00000638372 IDSB3KWA1 339 aa13.21□□□□□ -0.29
SCARB2-208ENST00000638372 TMX2-CTNND1H3BSU7 103 aa13.21□□□□□ -0.29
SCARB2-208ENST00000638372 GPX5O75715 221 aa13.21□□□□□ -0.29
SCARB2-208ENST00000638372 RAB40ALP0C0E4 278 aa13.21□□□□□ -0.29
SCARB2-208ENST00000638372 CISD3P0C7P0 127 aa13.21□□□□□ -0.29
SCARB2-208ENST00000638372 MYF5P13349 255 aa13.21□□□□□ -0.29
SCARB2-208ENST00000638372 PRPH2P23942 346 aa13.21□□□□□ -0.29
SCARB2-208ENST00000638372 SSTR2P30874 369 aa13.21□□□□□ -0.29
SCARB2-208ENST00000638372 GDNFP39905 211 aa13.21□□□□□ -0.29
SCARB2-208ENST00000638372 ZNF616Q08AN1 781 aa13.21□□□□□ -0.29
SCARB2-208ENST00000638372 PXKQ7Z7A4 578 aa13.21□□□□□ -0.29
SCARB2-208ENST00000638372 AMER3Q8N944 861 aa13.21□□□□□ -0.29
SCARB2-208ENST00000638372 RAB40AQ8WXH6 277 aa13.21□□□□□ -0.29
SCARB2-208ENST00000638372 ENKD1Q9H0I2 346 aa13.21□□□□□ -0.29
SCARB2-208ENST00000638372 TRDV1A0A1B0GX56 115 aa13.21□□□□□ -0.3
SCARB2-208ENST00000638372 A8MVM7 634 aa13.21□□□□□ -0.3
SCARB2-208ENST00000638372 ZNF705EA8MWA4 302 aaPredicted RBP13.21□□□□□ -0.3
SCARB2-208ENST00000638372 THBS1P07996 1170 aa13.21□□□□□ -0.3
SCARB2-208ENST00000638372 PTPN6P29350 595 aa13.21□□□□□ -0.3
SCARB2-208ENST00000638372 GABARAPL3Q9BY60 117 aa13.21□□□□□ -0.3
SCARB2-208ENST00000638372 PLA2G2FQ9BZM2 168 aa13.21□□□□□ -0.3
SCARB2-208ENST00000638372 BCL2L10Q9HD36 194 aa13.21□□□□□ -0.3
SCARB2-208ENST00000638372 KCNE3Q9Y6H6 103 aa13.21□□□□□ -0.3
SCARB2-208ENST00000638372 EP300Q09472 2414 aaPredicted RBP13.21□□□□□ -0.3
SCARB2-208ENST00000638372 SHANK3Q9BYB0 1731 aa13.21□□□□□ -0.3
SCARB2-208ENST00000638372 ALOX12BO75342 701 aa13.2□□□□□ -0.3
SCARB2-208ENST00000638372 IL13RA1P78552 427 aa13.2□□□□□ -0.3
SCARB2-208ENST00000638372 DCAF12Q5T6F0 453 aa13.2□□□□□ -0.3
SCARB2-208ENST00000638372 FAM198BQ6UWH4 519 aa13.2□□□□□ -0.3
SCARB2-208ENST00000638372 NRTNQ99748 197 aa13.2□□□□□ -0.3
SCARB2-208ENST00000638372 RBFOX1Q9NWB1 397 aaKnown RBP13.2□□□□□ -0.3
SCARB2-208ENST00000638372 PADI1Q9ULC6 663 aa13.2□□□□□ -0.3
SCARB2-208ENST00000638372 TMEM212A6NML5 194 aa13.2□□□□□ -0.3
SCARB2-208ENST00000638372 C2CD4DB7Z1M9 353 aa13.2□□□□□ -0.3
SCARB2-208ENST00000638372 NSA2O95478 260 aaKnown RBP13.2□□□□□ -0.3
SCARB2-208ENST00000638372 SLC2A1P11166 492 aa13.2□□□□□ -0.3
SCARB2-208ENST00000638372 GPLD1P80108 840 aa13.2□□□□□ -0.3
SCARB2-208ENST00000638372 C1orf140Q5VVS0 124 aa13.2□□□□□ -0.3
SCARB2-208ENST00000638372 DHRS4L2Q6PKH6 230 aa13.2□□□□□ -0.3
SCARB2-208ENST00000638372 METAP1DQ6UB28 335 aaPredicted RBP13.2□□□□□ -0.3
SCARB2-208ENST00000638372 LINC00696Q6ZRV3 163 aa13.2□□□□□ -0.3
SCARB2-208ENST00000638372 LIX1LQ8IVB5 337 aa13.2□□□□□ -0.3
SCARB2-208ENST00000638372 OR51D1Q8NGF3 324 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms