RNA–Protein interactions for RNA: ENST00000621474.4

CBWD3-217, Transcript of COBW domain containing 3, humanhuman

TSL 2

Gene CBWD3, Length 1,648 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-217ENST00000621474 GADD45GO95257 159 aa12.65□□□□□ -0.38
CBWD3-217ENST00000621474 ADORA3P0DMS8 318 aa12.65□□□□□ -0.38
CBWD3-217ENST00000621474 POU2F1P14859 743 aa12.65□□□□□ -0.38
CBWD3-217ENST00000621474 ZNF43P17038 809 aa12.65□□□□□ -0.38
CBWD3-217ENST00000621474 UGT2B10P36537 528 aa12.65□□□□□ -0.38
CBWD3-217ENST00000621474 OMPP47874 163 aa12.65□□□□□ -0.38
CBWD3-217ENST00000621474 FOXG1P55316 489 aaPredicted RBP12.65□□□□□ -0.38
CBWD3-217ENST00000621474 RPS4XP62701 263 aaKnown RBP12.65□□□□□ -0.38
CBWD3-217ENST00000621474 SPIBQ01892 262 aa12.65□□□□□ -0.38
CBWD3-217ENST00000621474 ZP4Q12836 540 aa12.65□□□□□ -0.38
CBWD3-217ENST00000621474 FGD3Q5JSP0 725 aa12.65□□□□□ -0.38
CBWD3-217ENST00000621474 TSPO2Q5TGU0 170 aa12.65□□□□□ -0.38
CBWD3-217ENST00000621474 CASP12Q6UXS9 341 aa12.65□□□□□ -0.38
CBWD3-217ENST00000621474 ZNF730Q6ZMV8 503 aa12.65□□□□□ -0.38
CBWD3-217ENST00000621474 Q6ZT83 130 aa12.65□□□□□ -0.38
CBWD3-217ENST00000621474 SLCO4A1Q96BD0 722 aa12.65□□□□□ -0.38
CBWD3-217ENST00000621474 APH1AQ96BI3 265 aa12.65□□□□□ -0.38
CBWD3-217ENST00000621474 ZNF347Q96SE7 839 aa12.65□□□□□ -0.38
CBWD3-217ENST00000621474 MED29Q9NX70 200 aa12.65□□□□□ -0.38
CBWD3-217ENST00000621474 VNN3Q9NY84 501 aa12.65□□□□□ -0.38
CBWD3-217ENST00000621474 MALT1Q9UDY8 824 aa12.65□□□□□ -0.38
CBWD3-217ENST00000621474 LYVE1Q9Y5Y7 322 aa12.65□□□□□ -0.38
CBWD3-217ENST00000621474 SETXQ7Z333 2677 aaKnown RBP12.64□□□□□ -0.39
CBWD3-217ENST00000621474 DHRS12A0PJE2 317 aa12.64□□□□□ -0.39
CBWD3-217ENST00000621474 SH3PXD2BA1X283 911 aa12.64□□□□□ -0.39
CBWD3-217ENST00000621474 C11orf98E9PRG8 122 aa12.64□□□□□ -0.39
CBWD3-217ENST00000621474 PDLIM1O00151 329 aa12.64□□□□□ -0.39
CBWD3-217ENST00000621474 CNOT4O95628 575 aaKnown RBP12.64□□□□□ -0.39
CBWD3-217ENST00000621474 RAP2AP10114 183 aa12.64□□□□□ -0.39
CBWD3-217ENST00000621474 UMPSP11172 480 aa12.64□□□□□ -0.39
CBWD3-217ENST00000621474 COX5AP20674 150 aa12.64□□□□□ -0.39
CBWD3-217ENST00000621474 GPR4P46093 362 aa12.64□□□□□ -0.39
CBWD3-217ENST00000621474 HMGA2P52926 109 aa12.64□□□□□ -0.39
CBWD3-217ENST00000621474 POU3F1Q03052 451 aaPredicted RBP12.64□□□□□ -0.39
CBWD3-217ENST00000621474 CHRNB3Q05901 458 aa12.64□□□□□ -0.39
CBWD3-217ENST00000621474 RPL18Q07020 188 aaKnown RBP12.64□□□□□ -0.39
CBWD3-217ENST00000621474 LGALS3BPQ08380 585 aa12.64□□□□□ -0.39
CBWD3-217ENST00000621474 FAM98BQ52LJ0 330 aaKnown RBP12.64□□□□□ -0.39
CBWD3-217ENST00000621474 MEX3BQ6ZN04 569 aaKnown RBP12.64□□□□□ -0.39
CBWD3-217ENST00000621474 TMPRSS11FQ6ZWK6 438 aa12.64□□□□□ -0.39
CBWD3-217ENST00000621474 PXKQ7Z7A4 578 aa12.64□□□□□ -0.39
CBWD3-217ENST00000621474 STK32CQ86UX6 486 aa12.64□□□□□ -0.39
CBWD3-217ENST00000621474 OR4K5Q8NGD3 323 aa12.64□□□□□ -0.39
CBWD3-217ENST00000621474 TXNDC15Q96J42 360 aa12.64□□□□□ -0.39
CBWD3-217ENST00000621474 GPA33Q99795 319 aa12.64□□□□□ -0.39
CBWD3-217ENST00000621474 TRIM15Q9C019 465 aa12.64□□□□□ -0.39
CBWD3-217ENST00000621474 SLC7A10Q9NS82 523 aa12.64□□□□□ -0.39
CBWD3-217ENST00000621474 HIF3AQ9Y2N7 669 aa12.64□□□□□ -0.39
CBWD3-217ENST00000621474 CACNA1DQ01668 2161 aa12.64□□□□□ -0.39
CBWD3-217ENST00000621474 ABCA4P78363 2273 aa12.64□□□□□ -0.39
CBWD3-217ENST00000621474 BLOC1S5-TXNDC5H3BN57 136 aa12.63□□□□□ -0.39
CBWD3-217ENST00000621474 KLF4O43474 513 aa12.63□□□□□ -0.39
CBWD3-217ENST00000621474 ADAP00813 363 aa12.63□□□□□ -0.39
CBWD3-217ENST00000621474 ZNF26P17031 533 aaPredicted RBP12.63□□□□□ -0.39
CBWD3-217ENST00000621474 PSMB1P20618 241 aaKnown RBP12.63□□□□□ -0.39
CBWD3-217ENST00000621474 IGHV1-2P23083 117 aa12.63□□□□□ -0.39
CBWD3-217ENST00000621474 AHCYP23526 432 aa12.63□□□□□ -0.39
CBWD3-217ENST00000621474 AQP2P41181 271 aa12.63□□□□□ -0.39
CBWD3-217ENST00000621474 CLDN17P56750 224 aa12.63□□□□□ -0.39
CBWD3-217ENST00000621474 TSC22D1Q15714 1073 aa12.63□□□□□ -0.39
CBWD3-217ENST00000621474 FBXW9Q5XUX1 488 aa12.63□□□□□ -0.39
CBWD3-217ENST00000621474 NIPAL3Q6P499 406 aa12.63□□□□□ -0.39
CBWD3-217ENST00000621474 LINGO2Q7L985 606 aa12.63□□□□□ -0.39
CBWD3-217ENST00000621474 AAED1Q7RTV5 226 aa12.63□□□□□ -0.39
CBWD3-217ENST00000621474 NANOGNBQ7Z5D8 188 aa12.63□□□□□ -0.39
CBWD3-217ENST00000621474 SPATA24Q86W54 205 aa12.63□□□□□ -0.39
CBWD3-217ENST00000621474 CXorf67Q86X51 503 aaPredicted RBP12.63□□□□□ -0.39
CBWD3-217ENST00000621474 UEVLDQ8IX04 471 aa12.63□□□□□ -0.39
CBWD3-217ENST00000621474 ZNF100Q8IYN0 542 aa12.63□□□□□ -0.39
CBWD3-217ENST00000621474 TMEM123Q8N131 208 aa12.63□□□□□ -0.39
CBWD3-217ENST00000621474 OR4C15Q8NGM1 316 aa12.63□□□□□ -0.39
CBWD3-217ENST00000621474 MOSPD2Q8NHP6 518 aa12.63□□□□□ -0.39
CBWD3-217ENST00000621474 POP5Q969H6 163 aaKnown RBP12.63□□□□□ -0.39
CBWD3-217ENST00000621474 LRRC46Q96FV0 321 aa12.63□□□□□ -0.39
CBWD3-217ENST00000621474 FAM46AQ96IP4 442 aaKnown RBP12.63□□□□□ -0.39
CBWD3-217ENST00000621474 ALPK1Q96QP1 1244 aa12.63□□□□□ -0.39
CBWD3-217ENST00000621474 CHID1Q9BWS9 393 aa12.63□□□□□ -0.39
CBWD3-217ENST00000621474 CRIM1Q9NZV1 1036 aa12.63□□□□□ -0.39
CBWD3-217ENST00000621474 AURKCQ9UQB9 309 aa12.63□□□□□ -0.39
CBWD3-217ENST00000621474 RCE1Q9Y256 329 aa12.63□□□□□ -0.39
CBWD3-217ENST00000621474 TRAV27A0A087WT01 109 aa12.62□□□□□ -0.39
CBWD3-217ENST00000621474 HTR3EA5X5Y0 456 aa12.62□□□□□ -0.39
CBWD3-217ENST00000621474 STAMBPO95630 424 aa12.62□□□□□ -0.39
CBWD3-217ENST00000621474 F13BP05160 661 aa12.62□□□□□ -0.39
CBWD3-217ENST00000621474 ITGA5P08648 1049 aa12.62□□□□□ -0.39
CBWD3-217ENST00000621474 PPP1R8Q12972 351 aaKnown RBP12.62□□□□□ -0.39
CBWD3-217ENST00000621474 LAPTM4AQ15012 233 aa12.62□□□□□ -0.39
CBWD3-217ENST00000621474 SFRP5Q5T4F7 317 aa12.62□□□□□ -0.39
CBWD3-217ENST00000621474 ZER1Q7Z7L7 766 aa12.62□□□□□ -0.39
CBWD3-217ENST00000621474 ZNF295-AS1Q8N0V1 137 aa12.62□□□□□ -0.39
CBWD3-217ENST00000621474 LRRC75AQ8NAA5 344 aa12.62□□□□□ -0.39
CBWD3-217ENST00000621474 PAPD5Q8NDF8 572 aaKnown RBP12.62□□□□□ -0.39
CBWD3-217ENST00000621474 OR13C2Q8NGS9 318 aa12.62□□□□□ -0.39
CBWD3-217ENST00000621474 LINC01560Q8TB33 94 aa12.62□□□□□ -0.39
CBWD3-217ENST00000621474 OR2M2Q96R28 347 aa12.62□□□□□ -0.39
CBWD3-217ENST00000621474 EMC6Q9BV81 110 aa12.62□□□□□ -0.39
CBWD3-217ENST00000621474 PARPBPQ9NWS1 579 aa12.62□□□□□ -0.39
CBWD3-217ENST00000621474 NOX1Q9Y5S8 564 aa12.62□□□□□ -0.39
CBWD3-217ENST00000621474 C16orf97H3BN30 126 aa12.62□□□□□ -0.39
CBWD3-217ENST00000621474 RNF13O43567 381 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms