RNA–Protein interactions for RNA: ENST00000620992.4

PTPDC1-204, Transcript of protein tyrosine phosphatase domain containing 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene PTPDC1, Length 4,437 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1-204ENST00000620992 OR4F15Q8NGB8 312 aa7.63□□□□□ -1.19
PTPDC1-204ENST00000620992 LRRC46Q96FV0 321 aa7.63□□□□□ -1.19
PTPDC1-204ENST00000620992 THOC3Q96J01 351 aaKnown RBP7.63□□□□□ -1.19
PTPDC1-204ENST00000620992 CRISPLD2Q9H0B8 497 aa7.63□□□□□ -1.19
PTPDC1-204ENST00000620992 SAP130Q9H0E3 1048 aa7.63□□□□□ -1.19
PTPDC1-204ENST00000620992 OR52A5Q9H2C5 316 aa7.63□□□□□ -1.19
PTPDC1-204ENST00000620992 CDCP1Q9H5V8 836 aa7.63□□□□□ -1.19
PTPDC1-204ENST00000620992 DDX31Q9H8H2 851 aaKnown RBP7.63□□□□□ -1.19
PTPDC1-204ENST00000620992 A0A0G2JPF8 293 aa7.62□□□□□ -1.19
PTPDC1-204ENST00000620992 TSPAN11A1L157 253 aa7.62□□□□□ -1.19
PTPDC1-204ENST00000620992 HNRNPCL3B7ZW38 293 aa7.62□□□□□ -1.19
PTPDC1-204ENST00000620992 BPNT1O95861 308 aa7.62□□□□□ -1.19
PTPDC1-204ENST00000620992 CD3GP09693 182 aa7.62□□□□□ -1.19
PTPDC1-204ENST00000620992 HNRNPCL4P0DMR1 293 aa7.62□□□□□ -1.19
PTPDC1-204ENST00000620992 SOX18P35713 384 aa7.62□□□□□ -1.19
PTPDC1-204ENST00000620992 CSNK1A1P48729 337 aa7.62□□□□□ -1.19
PTPDC1-204ENST00000620992 DEFB109BQ30KR1 87 aa7.62□□□□□ -1.19
PTPDC1-204ENST00000620992 C1orf53Q5VUE5 145 aa7.62□□□□□ -1.19
PTPDC1-204ENST00000620992 GLT8D1Q68CQ7 371 aa7.62□□□□□ -1.19
PTPDC1-204ENST00000620992 SYCE2Q6PIF2 218 aa7.62□□□□□ -1.19
PTPDC1-204ENST00000620992 C19orf48Q6RUI8 117 aa7.62□□□□□ -1.19
PTPDC1-204ENST00000620992 PAMR1Q6UXH9 720 aa7.62□□□□□ -1.19
PTPDC1-204ENST00000620992 C3P1Q6ZMU1 363 aa7.62□□□□□ -1.19
PTPDC1-204ENST00000620992 RPS19BP1Q86WX3 136 aaKnown RBP7.62□□□□□ -1.19
PTPDC1-204ENST00000620992 LINC00346Q8IVM7 164 aa7.62□□□□□ -1.19
PTPDC1-204ENST00000620992 ETFBKMTQ8IXQ9 262 aa7.62□□□□□ -1.19
PTPDC1-204ENST00000620992 OR5J2Q8NH18 312 aa7.62□□□□□ -1.19
PTPDC1-204ENST00000620992 PIGCQ92535 297 aa7.62□□□□□ -1.19
PTPDC1-204ENST00000620992 CREB3L1Q96BA8 519 aa7.62□□□□□ -1.19
PTPDC1-204ENST00000620992 TCTN2Q96GX1 697 aa7.62□□□□□ -1.19
PTPDC1-204ENST00000620992 PELI2Q9HAT8 420 aa7.62□□□□□ -1.19
PTPDC1-204ENST00000620992 UBQLN4Q9NRR5 601 aa7.62□□□□□ -1.19
PTPDC1-204ENST00000620992 DIMT1Q9UNQ2 313 aaKnown RBP7.62□□□□□ -1.19
PTPDC1-204ENST00000620992 B3GALT1Q9Y5Z6 326 aa7.62□□□□□ -1.19
PTPDC1-204ENST00000620992 NCOR2Q9Y618 2525 aa7.62□□□□□ -1.19
PTPDC1-204ENST00000620992 PRAMEF27A3QJZ7 478 aa7.62□□□□□ -1.19
PTPDC1-204ENST00000620992 SRPX2O60687 465 aaPredicted RBP7.62□□□□□ -1.19
PTPDC1-204ENST00000620992 MOSPD3O75425 235 aa7.62□□□□□ -1.19
PTPDC1-204ENST00000620992 IFNA21P01568 189 aa7.62□□□□□ -1.19
PTPDC1-204ENST00000620992 CSF3P09919 207 aa7.62□□□□□ -1.19
PTPDC1-204ENST00000620992 CALCBP10092 127 aa7.62□□□□□ -1.19
PTPDC1-204ENST00000620992 RPA2P15927 270 aa7.62□□□□□ -1.19
PTPDC1-204ENST00000620992 PITPNBP48739 271 aa7.62□□□□□ -1.19
PTPDC1-204ENST00000620992 MECP2P51608 486 aaKnown RBP7.62□□□□□ -1.19
PTPDC1-204ENST00000620992 SPOCK1Q08629 439 aa7.62□□□□□ -1.19
PTPDC1-204ENST00000620992 EIF2B1Q14232 305 aaKnown RBP7.62□□□□□ -1.19
PTPDC1-204ENST00000620992 C14orf28Q4W4Y0 310 aa7.62□□□□□ -1.19
PTPDC1-204ENST00000620992 C1QTNF12Q5T7M4 302 aa7.62□□□□□ -1.19
PTPDC1-204ENST00000620992 LCN10Q6JVE6 187 aa7.62□□□□□ -1.19
PTPDC1-204ENST00000620992 OPN5Q6U736 354 aa7.62□□□□□ -1.19
PTPDC1-204ENST00000620992 GLCCI1Q86VQ1 547 aa7.62□□□□□ -1.19
PTPDC1-204ENST00000620992 IFI44Q8TCB0 444 aa7.62□□□□□ -1.19
PTPDC1-204ENST00000620992 HAVCR1Q96D42 359 aa7.62□□□□□ -1.19
PTPDC1-204ENST00000620992 AMDHD1Q96NU7 426 aa7.62□□□□□ -1.19
PTPDC1-204ENST00000620992 CDX2Q99626 313 aaPredicted RBP7.62□□□□□ -1.19
PTPDC1-204ENST00000620992 ENKD1Q9H0I2 346 aa7.62□□□□□ -1.19
PTPDC1-204ENST00000620992 OBP2BQ9NPH6 170 aa7.62□□□□□ -1.19
PTPDC1-204ENST00000620992 C12orf4Q9NQ89 552 aa7.62□□□□□ -1.19
PTPDC1-204ENST00000620992 HEATR5BQ9P2D3 2071 aa7.62□□□□□ -1.19
PTPDC1-204ENST00000620992 C17orf113A0A1B0GUU1 675 aa7.62□□□□□ -1.19
PTPDC1-204ENST00000620992 TBX6O95947 436 aaPredicted RBP7.62□□□□□ -1.19
PTPDC1-204ENST00000620992 IL1AP01583 271 aa7.62□□□□□ -1.19
PTPDC1-204ENST00000620992 AKR1C4P17516 323 aa7.62□□□□□ -1.19
PTPDC1-204ENST00000620992 CD1CP29017 333 aa7.62□□□□□ -1.19
PTPDC1-204ENST00000620992 CD79BP40259 229 aa7.62□□□□□ -1.19
PTPDC1-204ENST00000620992 DBPQ10586 325 aaPredicted RBP7.62□□□□□ -1.19
PTPDC1-204ENST00000620992 RSU1Q15404 277 aa7.62□□□□□ -1.19
PTPDC1-204ENST00000620992 CHRFAM7AQ494W8 412 aa7.62□□□□□ -1.19
PTPDC1-204ENST00000620992 ENTPD8Q5MY95 495 aa7.62□□□□□ -1.19
PTPDC1-204ENST00000620992 FIP1L1Q6UN15 594 aaKnown RBP7.62□□□□□ -1.19
PTPDC1-204ENST00000620992 Q8N402 240 aa7.62□□□□□ -1.19
PTPDC1-204ENST00000620992 FAM26EQ8N5C1 309 aa7.62□□□□□ -1.19
PTPDC1-204ENST00000620992 ZNF511Q8NB15 262 aa7.62□□□□□ -1.19
PTPDC1-204ENST00000620992 DEFB124Q8NES8 71 aa7.62□□□□□ -1.19
PTPDC1-204ENST00000620992 MFSD8Q8NHS3 518 aa7.62□□□□□ -1.19
PTPDC1-204ENST00000620992 TM9SF4Q92544 642 aa7.62□□□□□ -1.19
PTPDC1-204ENST00000620992 TCEAL3Q969E4 200 aa7.62□□□□□ -1.19
PTPDC1-204ENST00000620992 ELSPBP1Q96BH3 223 aa7.62□□□□□ -1.19
PTPDC1-204ENST00000620992 DDIT4LQ96D03 193 aa7.62□□□□□ -1.19
PTPDC1-204ENST00000620992 CNN2Q99439 309 aaKnown RBP7.62□□□□□ -1.19
PTPDC1-204ENST00000620992 KATNB1Q9BVA0 655 aa7.62□□□□□ -1.19
PTPDC1-204ENST00000620992 OR10A5Q9H207 317 aa7.62□□□□□ -1.19
PTPDC1-204ENST00000620992 ZNF71Q9NQZ8 489 aaPredicted RBP7.62□□□□□ -1.19
PTPDC1-204ENST00000620992 OBP2AQ9NY56 170 aa7.62□□□□□ -1.19
PTPDC1-204ENST00000620992 TRAPPC4Q9Y296 219 aa7.62□□□□□ -1.19
PTPDC1-204ENST00000620992 CXorf51AA0A1B0GTR3 108 aa7.62□□□□□ -1.19
PTPDC1-204ENST00000620992 HPGDSO60760 199 aa7.62□□□□□ -1.19
PTPDC1-204ENST00000620992 GCH1P30793 250 aa7.62□□□□□ -1.19
PTPDC1-204ENST00000620992 GABRA2P47869 451 aa7.62□□□□□ -1.19
PTPDC1-204ENST00000620992 AKR1C2P52895 323 aa7.62□□□□□ -1.19
PTPDC1-204ENST00000620992 LIMK1P53667 647 aa7.62□□□□□ -1.19
PTPDC1-204ENST00000620992 CLDN12P56749 244 aa7.62□□□□□ -1.19
PTPDC1-204ENST00000620992 SMAD4Q13485 552 aaKnown RBP7.62□□□□□ -1.19
PTPDC1-204ENST00000620992 INSL4Q14641 139 aa7.62□□□□□ -1.19
PTPDC1-204ENST00000620992 STT3BQ8TCJ2 826 aa7.62□□□□□ -1.19
PTPDC1-204ENST00000620992 APOBEC4Q8WW27 367 aaKnown RBP7.62□□□□□ -1.19
PTPDC1-204ENST00000620992 ST6GAL2Q96JF0 529 aa7.62□□□□□ -1.19
PTPDC1-204ENST00000620992 OR52D1Q9H346 318 aa7.62□□□□□ -1.19
PTPDC1-204ENST00000620992 SATB2Q9UPW6 733 aa7.62□□□□□ -1.19
PTPDC1-204ENST00000620992 NTNG1Q9Y2I2 539 aa7.62□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms