RNA–Protein interactions for RNA: ENST00000618500.4

SNCA-213, Transcript of synuclein alpha, humanhuman

TSL 1 (best) BASIC

Gene SNCA, Length 3,022 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-213ENST00000618500 FTCDNL1E5RQL4 147 aa3.87□□□□□ -1.79
SNCA-213ENST00000618500 NME6O75414 186 aaPredicted RBP3.87□□□□□ -1.79
SNCA-213ENST00000618500 SEC14L2O76054 403 aa3.87□□□□□ -1.79
SNCA-213ENST00000618500 NUDT14O95848 222 aa3.87□□□□□ -1.79
SNCA-213ENST00000618500 CSTAP01040 98 aa3.87□□□□□ -1.79
SNCA-213ENST00000618500 HMGN2P05204 90 aaKnown RBP3.87□□□□□ -1.79
SNCA-213ENST00000618500 CSF1P09603 554 aa3.87□□□□□ -1.79
SNCA-213ENST00000618500 SLC6A9P48067 706 aa3.87□□□□□ -1.79
SNCA-213ENST00000618500 PTDSS1P48651 473 aaKnown RBP3.87□□□□□ -1.79
SNCA-213ENST00000618500 HTR6P50406 440 aa3.87□□□□□ -1.79
SNCA-213ENST00000618500 ZNF133P52736 654 aaPredicted RBP3.87□□□□□ -1.79
SNCA-213ENST00000618500 HSPB3Q12988 150 aa3.87□□□□□ -1.79
SNCA-213ENST00000618500 GSG1Q2KHT4 349 aa3.87□□□□□ -1.79
SNCA-213ENST00000618500 ZNF181Q2M3W8 571 aa3.87□□□□□ -1.79
SNCA-213ENST00000618500 HFEQ30201 348 aa3.87□□□□□ -1.79
SNCA-213ENST00000618500 ZMAT1Q5H9K5 638 aa3.87□□□□□ -1.79
SNCA-213ENST00000618500 PDZK1Q5T2W1 519 aa3.87□□□□□ -1.79
SNCA-213ENST00000618500 NHLRC1Q6VVB1 395 aa3.87□□□□□ -1.79
SNCA-213ENST00000618500 ANKRD46Q86W74 232 aa3.87□□□□□ -1.79
SNCA-213ENST00000618500 PTOV1Q86YD1 416 aa3.87□□□□□ -1.79
SNCA-213ENST00000618500 LRRC34Q8IZ02 419 aa3.87□□□□□ -1.79
SNCA-213ENST00000618500 PARP8Q8N3A8 854 aa3.87□□□□□ -1.79
SNCA-213ENST00000618500 ZSCAN4Q8NAM6 433 aaPredicted RBP3.87□□□□□ -1.79
SNCA-213ENST00000618500 METTL6Q8TCB7 284 aa3.87□□□□□ -1.79
SNCA-213ENST00000618500 ACMSDQ8TDX5 336 aa3.87□□□□□ -1.79
SNCA-213ENST00000618500 SNX33Q8WV41 574 aa3.87□□□□□ -1.79
SNCA-213ENST00000618500 AURKBQ96GD4 344 aaPredicted RBP3.87□□□□□ -1.79
SNCA-213ENST00000618500 TSSK3Q96PN8 268 aa3.87□□□□□ -1.79
SNCA-213ENST00000618500 EBPLQ9BY08 206 aa3.87□□□□□ -1.79
SNCA-213ENST00000618500 BCL2L14Q9BZR8 327 aa3.87□□□□□ -1.79
SNCA-213ENST00000618500 TPK1Q9H3S4 243 aa3.87□□□□□ -1.79
SNCA-213ENST00000618500 RANBP3Q9H6Z4 567 aaPredicted RBP3.87□□□□□ -1.79
SNCA-213ENST00000618500 B3GAT2Q9NPZ5 323 aa3.87□□□□□ -1.79
SNCA-213ENST00000618500 C1orf109Q9NX04 203 aa3.87□□□□□ -1.79
SNCA-213ENST00000618500 OR5V1Q9UGF6 321 aa3.87□□□□□ -1.79
SNCA-213ENST00000618500 KCNE5Q9UJ90 142 aa3.87□□□□□ -1.79
SNCA-213ENST00000618500 NPTNQ9Y639 398 aa3.87□□□□□ -1.79
SNCA-213ENST00000618500 A0A1B0GWJ7 208 aa3.86□□□□□ -1.79
SNCA-213ENST00000618500 A8MVM7 634 aa3.86□□□□□ -1.79
SNCA-213ENST00000618500 XPNPEP2O43895 674 aa3.86□□□□□ -1.79
SNCA-213ENST00000618500 CELA3BP08861 270 aa3.86□□□□□ -1.79
SNCA-213ENST00000618500 UROSP10746 265 aa3.86□□□□□ -1.79
SNCA-213ENST00000618500 SDC1P18827 310 aa3.86□□□□□ -1.79
SNCA-213ENST00000618500 UQCRC2P22695 453 aa3.86□□□□□ -1.79
SNCA-213ENST00000618500 PHBP35232 272 aa3.86□□□□□ -1.79
SNCA-213ENST00000618500 KLF3P57682 345 aaPredicted RBP3.86□□□□□ -1.79
SNCA-213ENST00000618500 SELENOVP59797 346 aa3.86□□□□□ -1.79
SNCA-213ENST00000618500 PLAURQ03405 335 aa3.86□□□□□ -1.79
SNCA-213ENST00000618500 TP53BP2Q13625 1128 aa3.86□□□□□ -1.79
SNCA-213ENST00000618500 SGO1Q5FBB7 561 aa3.86□□□□□ -1.79
SNCA-213ENST00000618500 TYW3Q6IPR3 259 aaKnown RBP3.86□□□□□ -1.79
SNCA-213ENST00000618500 FAM180BQ6P0A1 224 aa3.86□□□□□ -1.79
SNCA-213ENST00000618500 ZNF620Q6ZNG0 422 aa3.86□□□□□ -1.79
SNCA-213ENST00000618500 LRRC28Q86X40 367 aaPredicted RBP3.86□□□□□ -1.79
SNCA-213ENST00000618500 SPERTQ8NA61 448 aa3.86□□□□□ -1.79
SNCA-213ENST00000618500 C16orf58Q96GQ5 468 aa3.86□□□□□ -1.79
SNCA-213ENST00000618500 OXGR1Q96P68 337 aa3.86□□□□□ -1.79
SNCA-213ENST00000618500 ZNF385AQ96PM9 386 aaKnown RBP3.86□□□□□ -1.79
SNCA-213ENST00000618500 OR2M2Q96R28 347 aa3.86□□□□□ -1.79
SNCA-213ENST00000618500 WACQ9BTA9 647 aa3.86□□□□□ -1.79
SNCA-213ENST00000618500 C1QTNF6Q9BXI9 259 aa3.86□□□□□ -1.79
SNCA-213ENST00000618500 MS4A7Q9GZW8 240 aaPredicted RBP3.86□□□□□ -1.79
SNCA-213ENST00000618500 ZCCHC3Q9NUD5 404 aaKnown RBP3.86□□□□□ -1.79
SNCA-213ENST00000618500 EXD2Q9NVH0 621 aa3.86□□□□□ -1.79
SNCA-213ENST00000618500 AURKAIP1Q9NWT8 199 aaPredicted RBP3.86□□□□□ -1.79
SNCA-213ENST00000618500 ZNF224Q9NZL3 707 aa3.86□□□□□ -1.79
SNCA-213ENST00000618500 FBLN5Q9UBX5 448 aa3.86□□□□□ -1.79
SNCA-213ENST00000618500 FAF1Q9UNN5 650 aaPredicted RBP3.86□□□□□ -1.79
SNCA-213ENST00000618500 RNF114Q9Y508 228 aa3.86□□□□□ -1.79
SNCA-213ENST00000618500 MGAM2Q2M2H8 2515 aa3.86□□□□□ -1.79
SNCA-213ENST00000618500 LYSTQ99698 3801 aa3.86□□□□□ -1.79
SNCA-213ENST00000618500 LYNX1G3V0Z9 82 aa3.86□□□□□ -1.79
SNCA-213ENST00000618500 AIM2O14862 343 aa3.86□□□□□ -1.79
SNCA-213ENST00000618500 IGHV3-9P01782 118 aa3.86□□□□□ -1.79
SNCA-213ENST00000618500 SERPINA5P05154 406 aa3.86□□□□□ -1.79
SNCA-213ENST00000618500 MELTFP08582 738 aa3.86□□□□□ -1.79
SNCA-213ENST00000618500 LYNX1P0DP58 116 aa3.86□□□□□ -1.79
SNCA-213ENST00000618500 ARF1P84077 181 aaKnown RBP3.86□□□□□ -1.79
SNCA-213ENST00000618500 GALK2Q01415 458 aa3.86□□□□□ -1.79
SNCA-213ENST00000618500 DOC2BQ14184 412 aa3.86□□□□□ -1.79
SNCA-213ENST00000618500 CCNJQ5T5M9 372 aa3.86□□□□□ -1.79
SNCA-213ENST00000618500 RNF220Q5VTB9 566 aa3.86□□□□□ -1.79
SNCA-213ENST00000618500 PRAMEF8Q5VWM4 474 aa3.86□□□□□ -1.79
SNCA-213ENST00000618500 PRAMEF7Q5VXH5 474 aa3.86□□□□□ -1.79
SNCA-213ENST00000618500 RGS7BPQ6MZT1 257 aaPredicted RBP3.86□□□□□ -1.79
SNCA-213ENST00000618500 TMEM154Q6P9G4 183 aa3.86□□□□□ -1.79
SNCA-213ENST00000618500 ZNF572Q7Z3I7 529 aaPredicted RBP3.86□□□□□ -1.79
SNCA-213ENST00000618500 NET1Q7Z628 596 aaPredicted RBP3.86□□□□□ -1.79
SNCA-213ENST00000618500 GAS2L3Q86XJ1 694 aa3.86□□□□□ -1.79
SNCA-213ENST00000618500 LRRC8AQ8IWT6 810 aa3.86□□□□□ -1.79
SNCA-213ENST00000618500 TMCO5AQ8N6Q1 288 aa3.86□□□□□ -1.79
SNCA-213ENST00000618500 POU5F2Q8N7G0 328 aa3.86□□□□□ -1.79
SNCA-213ENST00000618500 SCAIQ8N9R8 606 aa3.86□□□□□ -1.79
SNCA-213ENST00000618500 TBC1D15Q8TC07 691 aa3.86□□□□□ -1.79
SNCA-213ENST00000618500 SSMEM1Q8WWF3 244 aa3.86□□□□□ -1.79
SNCA-213ENST00000618500 TMEM54Q969K7 222 aa3.86□□□□□ -1.79
SNCA-213ENST00000618500 CIDECQ96AQ7 238 aaPredicted RBP3.86□□□□□ -1.79
SNCA-213ENST00000618500 ERP44Q9BS26 406 aa3.86□□□□□ -1.79
SNCA-213ENST00000618500 EQTNQ9NQ60 294 aa3.86□□□□□ -1.79
SNCA-213ENST00000618500 MID2Q9UJV3 735 aa3.86□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms