RNA–Protein interactions for RNA: ENST00000608263.5

CTCFL-216, Transcript of CCCTC-binding factor like, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CTCFL, Length 4,040 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-216ENST00000608263 ULK3Q6PHR2 472 aa9.53□□□□□ -0.88
CTCFL-216ENST00000608263 GPAT4Q86UL3 456 aa9.53□□□□□ -0.88
CTCFL-216ENST00000608263 TPRA1Q86W33 373 aa9.53□□□□□ -0.88
CTCFL-216ENST00000608263 INO80EQ8NBZ0 244 aaPredicted RBP9.53□□□□□ -0.88
CTCFL-216ENST00000608263 GALNT6Q8NCL4 622 aa9.53□□□□□ -0.88
CTCFL-216ENST00000608263 MORN4Q8NDC4 146 aa9.53□□□□□ -0.88
CTCFL-216ENST00000608263 OR2I1PQ8NGU4 316 aa9.53□□□□□ -0.88
CTCFL-216ENST00000608263 SLC37A2Q8TED4 501 aa9.53□□□□□ -0.88
CTCFL-216ENST00000608263 ASB12Q8WXK4 309 aa9.53□□□□□ -0.88
CTCFL-216ENST00000608263 TIMM29Q9BSF4 260 aa9.53□□□□□ -0.88
CTCFL-216ENST00000608263 CFHR5Q9BXR6 569 aa9.53□□□□□ -0.88
CTCFL-216ENST00000608263 PLEKHA1Q9HB21 404 aa9.53□□□□□ -0.88
CTCFL-216ENST00000608263 IL20Q9NYY1 176 aa9.53□□□□□ -0.88
CTCFL-216ENST00000608263 MLXQ9UH92 298 aa9.53□□□□□ -0.88
CTCFL-216ENST00000608263 NUP50Q9UKX7 468 aa9.53□□□□□ -0.88
CTCFL-216ENST00000608263 DHDHQ9UQ10 334 aa9.53□□□□□ -0.88
CTCFL-216ENST00000608263 SLC6A5Q9Y345 797 aa9.53□□□□□ -0.88
CTCFL-216ENST00000608263 MN1Q10571 1320 aaPredicted RBP9.53□□□□□ -0.88
CTCFL-216ENST00000608263 PPM1BO75688 479 aa9.53□□□□□ -0.88
CTCFL-216ENST00000608263 PAPLNO95428 1278 aa9.53□□□□□ -0.88
CTCFL-216ENST00000608263 PRSS3P35030 304 aa9.53□□□□□ -0.88
CTCFL-216ENST00000608263 RAD52P43351 418 aa9.53□□□□□ -0.88
CTCFL-216ENST00000608263 SPOCK1Q08629 439 aa9.53□□□□□ -0.88
CTCFL-216ENST00000608263 CHAF1BQ13112 559 aa9.53□□□□□ -0.88
CTCFL-216ENST00000608263 ZCCHC12Q6PEW1 402 aa9.53□□□□□ -0.88
CTCFL-216ENST00000608263 MUC6Q6W4X9 2439 aa9.53□□□□□ -0.88
CTCFL-216ENST00000608263 CFAP77Q6ZQR2 320 aa9.53□□□□□ -0.88
CTCFL-216ENST00000608263 CMTM4Q8IZR5 234 aa9.53□□□□□ -0.88
CTCFL-216ENST00000608263 OR52B4Q8NGK2 314 aa9.53□□□□□ -0.88
CTCFL-216ENST00000608263 RNF170Q96K19 258 aa9.53□□□□□ -0.88
CTCFL-216ENST00000608263 SFXN2Q96NB2 322 aa9.53□□□□□ -0.88
CTCFL-216ENST00000608263 MAP3K3Q99759 626 aa9.53□□□□□ -0.88
CTCFL-216ENST00000608263 SYT4Q9H2B2 425 aa9.53□□□□□ -0.88
CTCFL-216ENST00000608263 ABRACLQ9P1F3 81 aa9.53□□□□□ -0.88
CTCFL-216ENST00000608263 SIRT4Q9Y6E7 314 aaPredicted RBP9.53□□□□□ -0.88
CTCFL-216ENST00000608263 A0A1B0GTH9 108 aa9.53□□□□□ -0.88
CTCFL-216ENST00000608263 A0A1W2PPL8 197 aa9.53□□□□□ -0.88
CTCFL-216ENST00000608263 SERTM1A2A2V5 107 aa9.53□□□□□ -0.88
CTCFL-216ENST00000608263 ZNF432O94892 652 aa9.53□□□□□ -0.88
CTCFL-216ENST00000608263 SRMP19623 302 aa9.53□□□□□ -0.88
CTCFL-216ENST00000608263 LTBQ06643 244 aa9.53□□□□□ -0.88
CTCFL-216ENST00000608263 EXOSC2Q13868 293 aaKnown RBP9.53□□□□□ -0.88
CTCFL-216ENST00000608263 ZNF800Q2TB10 664 aaPredicted RBP eCLIP9.53□□□□□ -0.885e-7■□□□□ 10.9
CTCFL-216ENST00000608263 GLYR1Q49A26 553 aaPredicted RBP9.53□□□□□ -0.88
CTCFL-216ENST00000608263 TMEM201Q5SNT2 666 aa9.53□□□□□ -0.88
CTCFL-216ENST00000608263 C1orf53Q5VUE5 145 aa9.53□□□□□ -0.88
CTCFL-216ENST00000608263 NUP54Q7Z3B4 507 aa9.53□□□□□ -0.88
CTCFL-216ENST00000608263 CCDC107Q8WV48 283 aa9.53□□□□□ -0.88
CTCFL-216ENST00000608263 RSPRY1Q96DX4 576 aa9.53□□□□□ -0.88
CTCFL-216ENST00000608263 NXF2Q9GZY0 626 aaKnown RBP9.53□□□□□ -0.88
CTCFL-216ENST00000608263 LDAHQ9H6V9 325 aa9.53□□□□□ -0.88
CTCFL-216ENST00000608263 CMC2Q9NRP2 79 aa9.53□□□□□ -0.88
CTCFL-216ENST00000608263 SCP2D1Q9UJQ7 156 aa9.53□□□□□ -0.88
CTCFL-216ENST00000608263 TRIM3O75382 744 aaPredicted RBP9.53□□□□□ -0.88
CTCFL-216ENST00000608263 GP1BBP13224 206 aa9.53□□□□□ -0.88
CTCFL-216ENST00000608263 ENDOUP21128 410 aaKnown RBP9.53□□□□□ -0.88
CTCFL-216ENST00000608263 MAOAP21397 527 aa9.53□□□□□ -0.88
CTCFL-216ENST00000608263 DCTDP32321 178 aa9.53□□□□□ -0.88
CTCFL-216ENST00000608263 NR0B1P51843 470 aaKnown RBP9.53□□□□□ -0.88
CTCFL-216ENST00000608263 RPS15P62841 145 aaKnown RBP9.53□□□□□ -0.88
CTCFL-216ENST00000608263 SMUG1Q53HV7 270 aa9.53□□□□□ -0.88
CTCFL-216ENST00000608263 TOR2AQ5JU69 321 aa9.53□□□□□ -0.88
CTCFL-216ENST00000608263 AADACL4Q5VUY2 407 aa9.53□□□□□ -0.88
CTCFL-216ENST00000608263 OR2T4Q8NH00 348 aa9.53□□□□□ -0.88
CTCFL-216ENST00000608263 THAP6Q8TBB0 222 aa9.53□□□□□ -0.88
CTCFL-216ENST00000608263 KCTD12Q96CX2 325 aaKnown RBP9.53□□□□□ -0.88
CTCFL-216ENST00000608263 G6PC3Q9BUM1 346 aa9.53□□□□□ -0.88
CTCFL-216ENST00000608263 NRIP3Q9NQ35 241 aa9.53□□□□□ -0.88
CTCFL-216ENST00000608263 MAN2C1Q9NTJ4 1040 aa9.53□□□□□ -0.88
CTCFL-216ENST00000608263 SLC39A1Q9NY26 324 aa9.53□□□□□ -0.88
CTCFL-216ENST00000608263 KDM4EB2RXH2 506 aaPredicted RBP9.52□□□□□ -0.89
CTCFL-216ENST00000608263 LGALS8O00214 317 aa9.52□□□□□ -0.89
CTCFL-216ENST00000608263 SLC16A7O60669 478 aa9.52□□□□□ -0.89
CTCFL-216ENST00000608263 AHSA1O95433 338 aa9.52□□□□□ -0.89
CTCFL-216ENST00000608263 ATP1B1P05026 303 aa9.52□□□□□ -0.89
CTCFL-216ENST00000608263 CEACAM5P06731 702 aa9.52□□□□□ -0.89
CTCFL-216ENST00000608263 FRKP42685 505 aaPredicted RBP9.52□□□□□ -0.89
CTCFL-216ENST00000608263 S100A10P60903 97 aa9.52□□□□□ -0.89
CTCFL-216ENST00000608263 LIPNQ5VXI9 398 aa9.52□□□□□ -0.89
CTCFL-216ENST00000608263 CARD17Q5XLA6 110 aa9.52□□□□□ -0.89
CTCFL-216ENST00000608263 MCATQ8IVS2 390 aaKnown RBP9.52□□□□□ -0.89
CTCFL-216ENST00000608263 ZNF615Q8N8J6 731 aa9.52□□□□□ -0.89
CTCFL-216ENST00000608263 TOR1AIP2Q8NFQ8 470 aa9.52□□□□□ -0.89
CTCFL-216ENST00000608263 DCBLD2Q96PD2 775 aa9.52□□□□□ -0.89
CTCFL-216ENST00000608263 C19orf43Q9BQ61 176 aa9.52□□□□□ -0.89
CTCFL-216ENST00000608263 SAV1Q9H4B6 383 aaPredicted RBP9.52□□□□□ -0.89
CTCFL-216ENST00000608263 ZNF281Q9Y2X9 895 aa9.52□□□□□ -0.89
CTCFL-216ENST00000608263 LSM2Q9Y333 95 aaKnown RBP9.52□□□□□ -0.89
CTCFL-216ENST00000608263 A6NCN8 305 aa9.52□□□□□ -0.89
CTCFL-216ENST00000608263 NPIPB8E9PQR5 432 aa9.52□□□□□ -0.89
CTCFL-216ENST00000608263 ACOT7O00154 380 aa9.52□□□□□ -0.89
CTCFL-216ENST00000608263 DNAJB6O75190 326 aa9.52□□□□□ -0.89
CTCFL-216ENST00000608263 RAB3DO95716 219 aa9.52□□□□□ -0.89
CTCFL-216ENST00000608263 WNT1P04628 370 aa9.52□□□□□ -0.89
CTCFL-216ENST00000608263 ZNF35P13682 527 aa9.52□□□□□ -0.89
CTCFL-216ENST00000608263 S1PR1P21453 382 aa9.52□□□□□ -0.89
CTCFL-216ENST00000608263 FGF9P31371 208 aaPredicted RBP9.52□□□□□ -0.89
CTCFL-216ENST00000608263 OR3A2P47893 321 aa9.52□□□□□ -0.89
CTCFL-216ENST00000608263 C21orf58P58505 322 aa9.52□□□□□ -0.89
CTCFL-216ENST00000608263 YIF1BQ5BJH7 314 aa9.52□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms