RNA–Protein interactions for RNA: ENST00000607841.5

CTSA-219, Transcript of cathepsin A, humanhuman

TSL 2

Gene CTSA, Length 571 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-219ENST00000607841 SLC9A3P48764 834 aa12.63□□□□□ -0.39
CTSA-219ENST00000607841 FAM27E3Q08E93 113 aa12.63□□□□□ -0.39
CTSA-219ENST00000607841 TAF11Q15544 211 aa12.63□□□□□ -0.39
CTSA-219ENST00000607841 ANKDD1AQ495B1 522 aa12.63□□□□□ -0.39
CTSA-219ENST00000607841 C1orf146Q5VVC0 180 aa12.63□□□□□ -0.39
CTSA-219ENST00000607841 FBXW9Q5XUX1 488 aa12.63□□□□□ -0.39
CTSA-219ENST00000607841 HIST2H2BCQ6DN03 193 aa12.63□□□□□ -0.39
CTSA-219ENST00000607841 TBPL2Q6SJ96 375 aa12.63□□□□□ -0.39
CTSA-219ENST00000607841 Q6ZT83 130 aa12.63□□□□□ -0.39
CTSA-219ENST00000607841 DMRTC2Q8IXT2 367 aaPredicted RBP12.63□□□□□ -0.39
CTSA-219ENST00000607841 ADGRG5Q8IZF4 528 aa12.63□□□□□ -0.39
CTSA-219ENST00000607841 LINC00471Q8N535 108 aa12.63□□□□□ -0.39
CTSA-219ENST00000607841 POMGNT2Q8NAT1 580 aa12.63□□□□□ -0.39
CTSA-219ENST00000607841 CANT1Q8WVQ1 401 aa12.63□□□□□ -0.39
CTSA-219ENST00000607841 ALPK1Q96QP1 1244 aa12.63□□□□□ -0.39
CTSA-219ENST00000607841 USB1Q9BQ65 265 aaKnown RBP12.63□□□□□ -0.39
CTSA-219ENST00000607841 CHID1Q9BWS9 393 aa12.63□□□□□ -0.39
CTSA-219ENST00000607841 TAS2R5Q9NYW4 299 aa12.63□□□□□ -0.39
CTSA-219ENST00000607841 UPB1Q9UBR1 384 aa12.63□□□□□ -0.39
CTSA-219ENST00000607841 NDRG3Q9UGV2 375 aa12.63□□□□□ -0.39
CTSA-219ENST00000607841 RCE1Q9Y256 329 aa12.63□□□□□ -0.39
CTSA-219ENST00000607841 GPR52Q9Y2T5 361 aa12.63□□□□□ -0.39
CTSA-219ENST00000607841 DOCK7Q96N67 2140 aa12.62□□□□□ -0.39
CTSA-219ENST00000607841 TRBV4-1A0A0J9YWV2 114 aa12.62□□□□□ -0.39
CTSA-219ENST00000607841 TCRBV3S1A0A5B6 114 aa12.62□□□□□ -0.39
CTSA-219ENST00000607841 TUBAL3A6NHL2 446 aa12.62□□□□□ -0.39
CTSA-219ENST00000607841 ZNF726A6NNF4 738 aa12.62□□□□□ -0.39
CTSA-219ENST00000607841 TNFRSF11BO00300 401 aa12.62□□□□□ -0.39
CTSA-219ENST00000607841 PIP5K1CO60331 668 aa12.62□□□□□ -0.39
CTSA-219ENST00000607841 KRT33AO76009 404 aa12.62□□□□□ -0.39
CTSA-219ENST00000607841 FUT4P22083 530 aa12.62□□□□□ -0.39
CTSA-219ENST00000607841 COL8A1P27658 744 aa12.62□□□□□ -0.39
CTSA-219ENST00000607841 NTF4P34130 210 aa12.62□□□□□ -0.39
CTSA-219ENST00000607841 UGT2B10P36537 528 aa12.62□□□□□ -0.39
CTSA-219ENST00000607841 KIR2DL3P43628 341 aa12.62□□□□□ -0.39
CTSA-219ENST00000607841 HMGA2P52926 109 aa12.62□□□□□ -0.39
CTSA-219ENST00000607841 CLDN17P56750 224 aa12.62□□□□□ -0.39
CTSA-219ENST00000607841 LSM11P83369 360 aaKnown RBP eCLIP12.62□□□□□ -0.39
CTSA-219ENST00000607841 POU3F1Q03052 451 aaPredicted RBP12.62□□□□□ -0.39
CTSA-219ENST00000607841 GK3PQ14409 553 aa12.62□□□□□ -0.39
CTSA-219ENST00000607841 NIPAL3Q6P499 406 aa12.62□□□□□ -0.39
CTSA-219ENST00000607841 TMPRSS11FQ6ZWK6 438 aa12.62□□□□□ -0.39
CTSA-219ENST00000607841 ABHD12BQ7Z5M8 362 aaPredicted RBP12.62□□□□□ -0.39
CTSA-219ENST00000607841 YTHDF3Q7Z739 585 aaKnown RBP12.62□□□□□ -0.39
CTSA-219ENST00000607841 OAFQ86UD1 273 aa12.62□□□□□ -0.39
CTSA-219ENST00000607841 GABRG1Q8N1C3 465 aa12.62□□□□□ -0.39
CTSA-219ENST00000607841 ACBD4Q8NC06 268 aa12.62□□□□□ -0.39
CTSA-219ENST00000607841 OR4K5Q8NGD3 323 aa12.62□□□□□ -0.39
CTSA-219ENST00000607841 RSRC1Q96IZ7 334 aaKnown RBP12.62□□□□□ -0.39
CTSA-219ENST00000607841 NDEL1Q9GZM8 345 aa12.62□□□□□ -0.39
CTSA-219ENST00000607841 OR10A4Q9H209 315 aa12.62□□□□□ -0.39
CTSA-219ENST00000607841 REEP1Q9H902 201 aa12.62□□□□□ -0.39
CTSA-219ENST00000607841 ASB6Q9NWX5 421 aa12.62□□□□□ -0.39
CTSA-219ENST00000607841 PRSS50Q9UI38 385 aa12.62□□□□□ -0.39
CTSA-219ENST00000607841 HIF3AQ9Y2N7 669 aa12.62□□□□□ -0.39
CTSA-219ENST00000607841 HECTD1Q9ULT8 2610 aa12.62□□□□□ -0.39
CTSA-219ENST00000607841 A0A1W2PRG6 482 aa12.61□□□□□ -0.39
CTSA-219ENST00000607841 SH3PXD2BA1X283 911 aa12.61□□□□□ -0.39
CTSA-219ENST00000607841 C11orf98E9PRG8 122 aa12.61□□□□□ -0.39
CTSA-219ENST00000607841 HNRNPRO43390 633 aaKnown RBP12.61□□□□□ -0.39
CTSA-219ENST00000607841 TRAF3IP2O43734 574 aaPredicted RBP12.61□□□□□ -0.39
CTSA-219ENST00000607841 OR10H3O60404 316 aa12.61□□□□□ -0.39
CTSA-219ENST00000607841 SLC43A1O75387 559 aa12.61□□□□□ -0.39
CTSA-219ENST00000607841 SERPINI2O75830 405 aa12.61□□□□□ -0.39
CTSA-219ENST00000607841 HPRP00739 348 aa12.61□□□□□ -0.39
CTSA-219ENST00000607841 ADAP00813 363 aa12.61□□□□□ -0.39
CTSA-219ENST00000607841 PPP3CBP16298 524 aa12.61□□□□□ -0.39
CTSA-219ENST00000607841 PSMB1P20618 241 aaKnown RBP12.61□□□□□ -0.39
CTSA-219ENST00000607841 MAKP20794 623 aa12.61□□□□□ -0.39
CTSA-219ENST00000607841 ITGADQ13349 1161 aa12.61□□□□□ -0.39
CTSA-219ENST00000607841 SFRP5Q5T4F7 317 aa12.61□□□□□ -0.39
CTSA-219ENST00000607841 OR2T5Q6IEZ7 315 aa12.61□□□□□ -0.39
CTSA-219ENST00000607841 STAC2Q6ZMT1 411 aa12.61□□□□□ -0.39
CTSA-219ENST00000607841 ZC3HAV1Q7Z2W4 902 aaKnown RBP12.61□□□□□ -0.39
CTSA-219ENST00000607841 STEAP2Q8NFT2 490 aa12.61□□□□□ -0.39
CTSA-219ENST00000607841 OR2T29Q8NH02 315 aa12.61□□□□□ -0.39
CTSA-219ENST00000607841 KISS1RQ969F8 398 aaPredicted RBP12.61□□□□□ -0.39
CTSA-219ENST00000607841 ADAD1Q96M93 576 aaKnown RBP12.61□□□□□ -0.39
CTSA-219ENST00000607841 FUZQ9BT04 418 aa12.61□□□□□ -0.39
CTSA-219ENST00000607841 SLCO5A1Q9H2Y9 848 aa12.61□□□□□ -0.39
CTSA-219ENST00000607841 CCM2LQ9NUG4 571 aaPredicted RBP12.61□□□□□ -0.39
CTSA-219ENST00000607841 MALT1Q9UDY8 824 aa12.61□□□□□ -0.39
CTSA-219ENST00000607841 KCNN3Q9UGI6 736 aa12.61□□□□□ -0.39
CTSA-219ENST00000607841 PCNX1Q96RV3 2341 aa12.6□□□□□ -0.39
CTSA-219ENST00000607841 GNGT2O14610 69 aa12.6□□□□□ -0.39
CTSA-219ENST00000607841 CST1P01037 141 aa12.6□□□□□ -0.39
CTSA-219ENST00000607841 IGHV3-9P01782 118 aa12.6□□□□□ -0.39
CTSA-219ENST00000607841 TSPAN19P0C672 248 aa12.6□□□□□ -0.39
CTSA-219ENST00000607841 HLA-DOBP13765 273 aa12.6□□□□□ -0.39
CTSA-219ENST00000607841 IL32P24001 234 aa12.6□□□□□ -0.39
CTSA-219ENST00000607841 AQP2P41181 271 aa12.6□□□□□ -0.39
CTSA-219ENST00000607841 GPR4P46093 362 aa12.6□□□□□ -0.39
CTSA-219ENST00000607841 OMPP47874 163 aa12.6□□□□□ -0.39
CTSA-219ENST00000607841 SELENOPP49908 381 aa12.6□□□□□ -0.39
CTSA-219ENST00000607841 PRPS1P60891 318 aa12.6□□□□□ -0.39
CTSA-219ENST00000607841 TGFBR3Q03167 851 aa12.6□□□□□ -0.39
CTSA-219ENST00000607841 GABPB1Q06547 395 aaPredicted RBP12.6□□□□□ -0.39
CTSA-219ENST00000607841 RPL18Q07020 188 aaKnown RBP12.6□□□□□ -0.39
CTSA-219ENST00000607841 FAPQ12884 760 aa12.6□□□□□ -0.39
CTSA-219ENST00000607841 SEC23BQ15437 767 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms