RNA–Protein interactions for RNA: ENST00000600137.5

VRK3-219, Transcript of vaccinia related kinase 3, humanhuman

TSL 3

Gene VRK3, Length 822 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-219ENST00000600137 NOSIPQ9Y314 301 aaKnown RBP12.16□□□□□ -0.46
VRK3-219ENST00000600137 LYVE1Q9Y5Y7 322 aa12.16□□□□□ -0.46
VRK3-219ENST00000600137 PDLIM1O00151 329 aa12.15□□□□□ -0.46
VRK3-219ENST00000600137 PTP4A3O75365 173 aa12.15□□□□□ -0.46
VRK3-219ENST00000600137 GADD45GO95257 159 aa12.15□□□□□ -0.46
VRK3-219ENST00000600137 CCKARP32238 428 aa12.15□□□□□ -0.46
VRK3-219ENST00000600137 CD79BP40259 229 aa12.15□□□□□ -0.46
VRK3-219ENST00000600137 ERFP50548 548 aa12.15□□□□□ -0.46
VRK3-219ENST00000600137 RPS4XP62701 263 aaKnown RBP12.15□□□□□ -0.46
VRK3-219ENST00000600137 PUDPQ08623 228 aa12.15□□□□□ -0.46
VRK3-219ENST00000600137 PPP1R8Q12972 351 aaKnown RBP12.15□□□□□ -0.46
VRK3-219ENST00000600137 SNTB1Q13884 538 aaKnown RBP12.15□□□□□ -0.46
VRK3-219ENST00000600137 LAPTM4AQ15012 233 aa12.15□□□□□ -0.46
VRK3-219ENST00000600137 FAM98BQ52LJ0 330 aaKnown RBP12.15□□□□□ -0.46
VRK3-219ENST00000600137 ZNF770Q6IQ21 691 aaPredicted RBP12.15□□□□□ -0.46
VRK3-219ENST00000600137 STAC2Q6ZMT1 411 aa12.15□□□□□ -0.46
VRK3-219ENST00000600137 ZNF730Q6ZMV8 503 aa12.15□□□□□ -0.46
VRK3-219ENST00000600137 YTHDF3Q7Z739 585 aaKnown RBP12.15□□□□□ -0.46
VRK3-219ENST00000600137 PXKQ7Z7A4 578 aa12.15□□□□□ -0.46
VRK3-219ENST00000600137 GPAT4Q86UL3 456 aa12.15□□□□□ -0.46
VRK3-219ENST00000600137 DMRTC2Q8IXT2 367 aaPredicted RBP12.15□□□□□ -0.46
VRK3-219ENST00000600137 C10orf53Q8N6V4 93 aa12.15□□□□□ -0.46
VRK3-219ENST00000600137 OR4K5Q8NGD3 323 aa12.15□□□□□ -0.46
VRK3-219ENST00000600137 MOSPD2Q8NHP6 518 aa12.15□□□□□ -0.46
VRK3-219ENST00000600137 DUS3LQ96G46 650 aaKnown RBP12.15□□□□□ -0.46
VRK3-219ENST00000600137 ASPNQ9BXN1 380 aa12.15□□□□□ -0.46
VRK3-219ENST00000600137 FOXD3Q9UJU5 478 aaPredicted RBP12.15□□□□□ -0.46
VRK3-219ENST00000600137 HIF3AQ9Y2N7 669 aa12.15□□□□□ -0.46
VRK3-219ENST00000600137 FBN2P35556 2912 aa12.14□□□□□ -0.47
VRK3-219ENST00000600137 ITPR2Q14571 2701 aa12.14□□□□□ -0.47
VRK3-219ENST00000600137 MRPL33O75394 65 aaKnown RBP12.14□□□□□ -0.47
VRK3-219ENST00000600137 KRT36O76013 467 aa12.14□□□□□ -0.47
VRK3-219ENST00000600137 ADORA3P0DMS8 318 aa12.14□□□□□ -0.47
VRK3-219ENST00000600137 AQP2P41181 271 aa12.14□□□□□ -0.47
VRK3-219ENST00000600137 SELENOPP49908 381 aa12.14□□□□□ -0.47
VRK3-219ENST00000600137 SMIM11AP58511 58 aa12.14□□□□□ -0.47
VRK3-219ENST00000600137 FXYD6P3P58550 94 aa12.14□□□□□ -0.47
VRK3-219ENST00000600137 SPIBQ01892 262 aa12.14□□□□□ -0.47
VRK3-219ENST00000600137 RPL18Q07020 188 aaKnown RBP12.14□□□□□ -0.47
VRK3-219ENST00000600137 EXOC3L2Q2M3D2 409 aa12.14□□□□□ -0.47
VRK3-219ENST00000600137 FGD3Q5JSP0 725 aa12.14□□□□□ -0.47
VRK3-219ENST00000600137 TSPO2Q5TGU0 170 aa12.14□□□□□ -0.47
VRK3-219ENST00000600137 OR2T5Q6IEZ7 315 aa12.14□□□□□ -0.47
VRK3-219ENST00000600137 BEND4Q6ZU67 534 aa12.14□□□□□ -0.47
VRK3-219ENST00000600137 LINGO2Q7L985 606 aa12.14□□□□□ -0.47
VRK3-219ENST00000600137 TMEM179BQ7Z7N9 219 aa12.14□□□□□ -0.47
VRK3-219ENST00000600137 SPATA24Q86W54 205 aa12.14□□□□□ -0.47
VRK3-219ENST00000600137 OR2T29Q8NH02 315 aa12.14□□□□□ -0.47
VRK3-219ENST00000600137 ALPK1Q96QP1 1244 aa12.14□□□□□ -0.47
VRK3-219ENST00000600137 TNFRSF13CQ96RJ3 184 aa12.14□□□□□ -0.47
VRK3-219ENST00000600137 SPOCK3Q9BQ16 436 aa12.14□□□□□ -0.47
VRK3-219ENST00000600137 TRIM15Q9C019 465 aa12.14□□□□□ -0.47
VRK3-219ENST00000600137 SLC7A10Q9NS82 523 aa12.14□□□□□ -0.47
VRK3-219ENST00000600137 PARPBPQ9NWS1 579 aa12.14□□□□□ -0.47
VRK3-219ENST00000600137 ELOVL5Q9NYP7 299 aa12.14□□□□□ -0.47
VRK3-219ENST00000600137 TACC2O95359 2948 aa12.14□□□□□ -0.47
VRK3-219ENST00000600137 HRNRQ86YZ3 2850 aaPredicted RBP12.13□□□□□ -0.47
VRK3-219ENST00000600137 BLOC1S5-TXNDC5H3BN57 136 aa12.13□□□□□ -0.47
VRK3-219ENST00000600137 FKBP6O75344 327 aa12.13□□□□□ -0.47
VRK3-219ENST00000600137 CNOT4O95628 575 aaKnown RBP12.13□□□□□ -0.47
VRK3-219ENST00000600137 IGHV3-9P01782 118 aa12.13□□□□□ -0.47
VRK3-219ENST00000600137 NQO1P15559 274 aaKnown RBP12.13□□□□□ -0.47
VRK3-219ENST00000600137 ZNF43P17038 809 aa12.13□□□□□ -0.47
VRK3-219ENST00000600137 GTF2E2P29084 291 aaKnown RBP12.13□□□□□ -0.47
VRK3-219ENST00000600137 GPR4P46093 362 aa12.13□□□□□ -0.47
VRK3-219ENST00000600137 CLDN17P56750 224 aa12.13□□□□□ -0.47
VRK3-219ENST00000600137 GABPB1Q06547 395 aaPredicted RBP12.13□□□□□ -0.47
VRK3-219ENST00000600137 LGALS3BPQ08380 585 aa12.13□□□□□ -0.47
VRK3-219ENST00000600137 FBXW9Q5XUX1 488 aa12.13□□□□□ -0.47
VRK3-219ENST00000600137 C1orf94Q6P1W5 598 aa12.13□□□□□ -0.47
VRK3-219ENST00000600137 Q6ZT83 130 aa12.13□□□□□ -0.47
VRK3-219ENST00000600137 AAED1Q7RTV5 226 aa12.13□□□□□ -0.47
VRK3-219ENST00000600137 TMEM123Q8N131 208 aa12.13□□□□□ -0.47
VRK3-219ENST00000600137 FAM46AQ96IP4 442 aaKnown RBP12.13□□□□□ -0.47
VRK3-219ENST00000600137 EMC6Q9BV81 110 aa12.13□□□□□ -0.47
VRK3-219ENST00000600137 NTN4Q9HB63 628 aa12.13□□□□□ -0.47
VRK3-219ENST00000600137 MCCC2Q9HCC0 563 aa12.13□□□□□ -0.47
VRK3-219ENST00000600137 MED29Q9NX70 200 aa12.13□□□□□ -0.47
VRK3-219ENST00000600137 MALT1Q9UDY8 824 aa12.13□□□□□ -0.47
VRK3-219ENST00000600137 AURKCQ9UQB9 309 aa12.13□□□□□ -0.47
VRK3-219ENST00000600137 SIGLEC7Q9Y286 467 aa12.13□□□□□ -0.47
VRK3-219ENST00000600137 NOX1Q9Y5S8 564 aa12.13□□□□□ -0.47
VRK3-219ENST00000600137 SLC35F4A4IF30 521 aa12.12□□□□□ -0.47
VRK3-219ENST00000600137 C11orf98E9PRG8 122 aa12.12□□□□□ -0.47
VRK3-219ENST00000600137 TNFRSF11BO00300 401 aa12.12□□□□□ -0.47
VRK3-219ENST00000600137 UPK3AO75631 287 aa12.12□□□□□ -0.47
VRK3-219ENST00000600137 STAMBPO95630 424 aa12.12□□□□□ -0.47
VRK3-219ENST00000600137 ADAP00813 363 aa12.12□□□□□ -0.47
VRK3-219ENST00000600137 POU2F1P14859 743 aa12.12□□□□□ -0.47
VRK3-219ENST00000600137 PSMB1P20618 241 aaKnown RBP12.12□□□□□ -0.47
VRK3-219ENST00000600137 COX5AP20674 150 aa12.12□□□□□ -0.47
VRK3-219ENST00000600137 IGHV1-2P23083 117 aa12.12□□□□□ -0.47
VRK3-219ENST00000600137 AHCYP23526 432 aa12.12□□□□□ -0.47
VRK3-219ENST00000600137 UGT2B10P36537 528 aa12.12□□□□□ -0.47
VRK3-219ENST00000600137 GSSP48637 474 aa12.12□□□□□ -0.47
VRK3-219ENST00000600137 IST1P53990 364 aa12.12□□□□□ -0.47
VRK3-219ENST00000600137 SORDQ00796 357 aa12.12□□□□□ -0.47
VRK3-219ENST00000600137 POU3F1Q03052 451 aaPredicted RBP12.12□□□□□ -0.47
VRK3-219ENST00000600137 PHYHD1Q5SRE7 291 aa12.12□□□□□ -0.47
VRK3-219ENST00000600137 SFRP5Q5T4F7 317 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms