RNA–Protein interactions for RNA: ENST00000593919.5

VRK3-205, Transcript of vaccinia related kinase 3, humanhuman

TSL 1 (best) BASIC

Gene VRK3, Length 1,979 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-205ENST00000593919 SNTNA6NMZ2 147 aa11.93□□□□□ -0.5
VRK3-205ENST00000593919 ZNF891A8MT65 544 aaPredicted RBP11.93□□□□□ -0.5
VRK3-205ENST00000593919 A8MVM7 634 aa11.93□□□□□ -0.5
VRK3-205ENST00000593919 KDM4EB2RXH2 506 aaPredicted RBP11.93□□□□□ -0.5
VRK3-205ENST00000593919 BHLHE40O14503 412 aa11.93□□□□□ -0.5
VRK3-205ENST00000593919 SURF4O15260 269 aa11.93□□□□□ -0.5
VRK3-205ENST00000593919 TRIM3O75382 744 aaPredicted RBP11.93□□□□□ -0.5
VRK3-205ENST00000593919 IMPDH2P12268 514 aa11.93□□□□□ -0.5
VRK3-205ENST00000593919 CD40LGP29965 261 aa11.93□□□□□ -0.5
VRK3-205ENST00000593919 SOX6P35712 828 aa11.93□□□□□ -0.5
VRK3-205ENST00000593919 CDH11P55287 796 aa11.93□□□□□ -0.5
VRK3-205ENST00000593919 SOX8P57073 446 aa11.93□□□□□ -0.5
VRK3-205ENST00000593919 GPR85P60893 370 aa11.93□□□□□ -0.5
VRK3-205ENST00000593919 RPS4XP62701 263 aaKnown RBP11.93□□□□□ -0.5
VRK3-205ENST00000593919 FOXK1P85037 733 aa11.93□□□□□ -0.5
VRK3-205ENST00000593919 LTBQ06643 244 aa11.93□□□□□ -0.5
VRK3-205ENST00000593919 MLLT11Q13015 90 aaPredicted RBP11.93□□□□□ -0.5
VRK3-205ENST00000593919 OR2G6Q5TZ20 316 aa11.93□□□□□ -0.5
VRK3-205ENST00000593919 AGAP7PQ5VUJ5 663 aa11.93□□□□□ -0.5
VRK3-205ENST00000593919 TIGD3Q6B0B8 471 aa11.93□□□□□ -0.5
VRK3-205ENST00000593919 OR9Q1Q8NGQ5 310 aa11.93□□□□□ -0.5
VRK3-205ENST00000593919 LIPHQ8WWY8 451 aa11.93□□□□□ -0.5
VRK3-205ENST00000593919 RELTQ969Z4 430 aa11.93□□□□□ -0.5
VRK3-205ENST00000593919 AGAP4Q96P64 663 aa11.93□□□□□ -0.5
VRK3-205ENST00000593919 PTDSS2Q9BVG9 487 aa11.93□□□□□ -0.5
VRK3-205ENST00000593919 NXF2Q9GZY0 626 aaKnown RBP11.93□□□□□ -0.5
VRK3-205ENST00000593919 PLA2G3Q9NZ20 509 aa11.93□□□□□ -0.5
VRK3-205ENST00000593919 TLX3O43711 291 aaPredicted RBP11.92□□□□□ -0.5
VRK3-205ENST00000593919 SLC2A10O95528 541 aa11.92□□□□□ -0.5
VRK3-205ENST00000593919 ASAH2BP0C7U1 165 aa11.92□□□□□ -0.5
VRK3-205ENST00000593919 IL11P20809 199 aa11.92□□□□□ -0.5
VRK3-205ENST00000593919 S100A5P33763 92 aa11.92□□□□□ -0.5
VRK3-205ENST00000593919 RAB40BQ12829 278 aa11.92□□□□□ -0.5
VRK3-205ENST00000593919 OR1C1Q15619 314 aa11.92□□□□□ -0.5
VRK3-205ENST00000593919 CRTC2Q53ET0 693 aaPredicted RBP11.92□□□□□ -0.5
VRK3-205ENST00000593919 C1orf140Q5VVS0 124 aa11.92□□□□□ -0.5
VRK3-205ENST00000593919 OR5M1Q8NGP8 315 aa11.92□□□□□ -0.5
VRK3-205ENST00000593919 STK35Q8TDR2 534 aa11.92□□□□□ -0.5
VRK3-205ENST00000593919 KCNE4Q8WWG9 221 aa11.92□□□□□ -0.5
VRK3-205ENST00000593919 OTULINQ96BN8 352 aa11.92□□□□□ -0.5
VRK3-205ENST00000593919 TRMT61AQ96FX7 289 aaKnown RBP11.92□□□□□ -0.5
VRK3-205ENST00000593919 KCNS3Q9BQ31 491 aa11.92□□□□□ -0.5
VRK3-205ENST00000593919 IFT27Q9BW83 186 aa11.92□□□□□ -0.5
VRK3-205ENST00000593919 ASPNQ9BXN1 380 aa11.92□□□□□ -0.5
VRK3-205ENST00000593919 FGF20Q9NP95 211 aaPredicted RBP11.92□□□□□ -0.5
VRK3-205ENST00000593919 NDUFB11Q9NX14 153 aa11.92□□□□□ -0.5
VRK3-205ENST00000593919 SEC14L4Q9UDX3 406 aa11.92□□□□□ -0.5
VRK3-205ENST00000593919 STUB1Q9UNE7 303 aa11.92□□□□□ -0.5
VRK3-205ENST00000593919 DNAJC13O75165 2243 aa11.92□□□□□ -0.5
VRK3-205ENST00000593919 SPENQ96T58 3664 aaKnown RBP11.92□□□□□ -0.5
VRK3-205ENST00000593919 IRGMA1A4Y4 181 aa11.92□□□□□ -0.5
VRK3-205ENST00000593919 FAM47E-STBD1D6RA91 191 aa11.92□□□□□ -0.5
VRK3-205ENST00000593919 EFNA2O43921 213 aa11.92□□□□□ -0.5
VRK3-205ENST00000593919 NDUFB2O95178 105 aa11.92□□□□□ -0.5
VRK3-205ENST00000593919 BGLAPP02818 100 aa11.92□□□□□ -0.5
VRK3-205ENST00000593919 PSMA1P25786 263 aaKnown RBP11.92□□□□□ -0.5
VRK3-205ENST00000593919 DPP4P27487 766 aa11.92□□□□□ -0.5
VRK3-205ENST00000593919 CRYBB2P43320 205 aa11.92□□□□□ -0.5
VRK3-205ENST00000593919 PPP5CP53041 499 aa11.92□□□□□ -0.5
VRK3-205ENST00000593919 DSCR4P56555 118 aaPredicted RBP11.92□□□□□ -0.5
VRK3-205ENST00000593919 WNT4P56705 351 aa11.92□□□□□ -0.5
VRK3-205ENST00000593919 FAM69AQ5T7M9 428 aa11.92□□□□□ -0.5
VRK3-205ENST00000593919 C5orf46Q6UWT4 87 aa11.92□□□□□ -0.5
VRK3-205ENST00000593919 PHC2Q8IXK0 858 aa11.92□□□□□ -0.5
VRK3-205ENST00000593919 LNX2Q8N448 690 aa11.92□□□□□ -0.5
VRK3-205ENST00000593919 BBS1Q8NFJ9 593 aa11.92□□□□□ -0.5
VRK3-205ENST00000593919 ARL5BQ96KC2 179 aa11.92□□□□□ -0.5
VRK3-205ENST00000593919 ZNF552Q9H707 407 aaPredicted RBP11.92□□□□□ -0.5
VRK3-205ENST00000593919 FKRPQ9H9S5 495 aa11.92□□□□□ -0.5
VRK3-205ENST00000593919 MRPS18AQ9NVS2 196 aaKnown RBP11.92□□□□□ -0.5
VRK3-205ENST00000593919 SPIN1Q9Y657 262 aaPredicted RBP11.92□□□□□ -0.5
VRK3-205ENST00000593919 A3GALT2U3KPV4 340 aa11.92□□□□□ -0.5
VRK3-205ENST00000593919 ZNF407Q9C0G0 2248 aa11.91□□□□□ -0.5
VRK3-205ENST00000593919 KIAA1549Q9HCM3 1950 aa11.91□□□□□ -0.5
VRK3-205ENST00000593919 LRRC3CA6NJW4 275 aa11.91□□□□□ -0.5
VRK3-205ENST00000593919 MCIDASD6RGH6 385 aa11.91□□□□□ -0.5
VRK3-205ENST00000593919 H3BML4 177 aa11.91□□□□□ -0.5
VRK3-205ENST00000593919 BLOC1S5-TXNDC5H3BN57 136 aa11.91□□□□□ -0.5
VRK3-205ENST00000593919 KLK10O43240 276 aa11.91□□□□□ -0.5
VRK3-205ENST00000593919 EFSO43281 561 aa11.91□□□□□ -0.5
VRK3-205ENST00000593919 CBR3O75828 277 aa11.91□□□□□ -0.5
VRK3-205ENST00000593919 PPP1R3DO95685 299 aa11.91□□□□□ -0.5
VRK3-205ENST00000593919 TSPAN19P0C672 248 aa11.91□□□□□ -0.5
VRK3-205ENST00000593919 SLC6A6P31641 620 aa11.91□□□□□ -0.5
VRK3-205ENST00000593919 CD79BP40259 229 aa11.91□□□□□ -0.5
VRK3-205ENST00000593919 C3orf33Q6P1S2 294 aa11.91□□□□□ -0.5
VRK3-205ENST00000593919 ZNF554Q86TJ5 538 aa11.91□□□□□ -0.5
VRK3-205ENST00000593919 ZNF248Q8NDW4 579 aa11.91□□□□□ -0.5
VRK3-205ENST00000593919 ATP6V1C2Q8NEY4 427 aa11.91□□□□□ -0.5
VRK3-205ENST00000593919 GATAD2BQ8WXI9 593 aa11.91□□□□□ -0.5
VRK3-205ENST00000593919 ZBTB8AQ96BR9 441 aa11.91□□□□□ -0.5
VRK3-205ENST00000593919 SLC25A36Q96CQ1 311 aa11.91□□□□□ -0.5
VRK3-205ENST00000593919 HES7Q9BYE0 225 aa11.91□□□□□ -0.5
VRK3-205ENST00000593919 MROQ9BYG7 248 aa11.91□□□□□ -0.5
VRK3-205ENST00000593919 RERGLQ9H628 205 aa11.91□□□□□ -0.5
VRK3-205ENST00000593919 POLE4Q9NR33 117 aa11.91□□□□□ -0.5
VRK3-205ENST00000593919 ABCB10Q9NRK6 738 aa11.91□□□□□ -0.5
VRK3-205ENST00000593919 ZNF229Q9UJW7 825 aa11.91□□□□□ -0.5
VRK3-205ENST00000593919 SSR3Q9UNL2 185 aa11.91□□□□□ -0.5
VRK3-205ENST00000593919 RPH3AQ9Y2J0 694 aaPredicted RBP11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms