RNA–Protein interactions for RNA: ENST00000593223.1

SMAD4-216, Transcript of SMAD family member 4, humanhuman

TSL 3

Gene SMAD4, Length 568 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-216ENST00000593223 DDX60Q8IY21 1712 aaKnown RBP4.07□□□□□ -1.76
SMAD4-216ENST00000593223 MAP3K15Q6ZN16 1313 aa4.06□□□□□ -1.76
SMAD4-216ENST00000593223 RLFQ13129 1914 aa4.06□□□□□ -1.76
SMAD4-216ENST00000593223 MTMR11A4FU01 709 aa4.06□□□□□ -1.76
SMAD4-216ENST00000593223 FBLL1A6NHQ2 334 aaKnown RBP4.06□□□□□ -1.76
SMAD4-216ENST00000593223 E5RGE8 158 aa4.06□□□□□ -1.76
SMAD4-216ENST00000593223 SDHDO14521 159 aa4.06□□□□□ -1.76
SMAD4-216ENST00000593223 SOCS3O14543 225 aa4.06□□□□□ -1.76
SMAD4-216ENST00000593223 AIM2O14862 343 aa4.06□□□□□ -1.76
SMAD4-216ENST00000593223 TFECO14948 347 aaPredicted RBP4.06□□□□□ -1.76
SMAD4-216ENST00000593223 SCO2O43819 266 aa4.06□□□□□ -1.76
SMAD4-216ENST00000593223 CEACAM4O75871 244 aa4.06□□□□□ -1.76
SMAD4-216ENST00000593223 ANP32DO95626 131 aa4.06□□□□□ -1.76
SMAD4-216ENST00000593223 ASS1P00966 412 aaKnown RBP4.06□□□□□ -1.76
SMAD4-216ENST00000593223 IL6P05231 212 aa4.06□□□□□ -1.76
SMAD4-216ENST00000593223 APRTP07741 180 aa4.06□□□□□ -1.76
SMAD4-216ENST00000593223 ANXA5P08758 320 aa4.06□□□□□ -1.76
SMAD4-216ENST00000593223 GOLGA8HP0CJ92 632 aa4.06□□□□□ -1.76
SMAD4-216ENST00000593223 GP9P14770 177 aa4.06□□□□□ -1.76
SMAD4-216ENST00000593223 FCARP24071 287 aa4.06□□□□□ -1.76
SMAD4-216ENST00000593223 RBMS1P29558 406 aaKnown RBP4.06□□□□□ -1.76
SMAD4-216ENST00000593223 DUTP33316 252 aaKnown RBP4.06□□□□□ -1.76
SMAD4-216ENST00000593223 HMGCLP35914 325 aa4.06□□□□□ -1.76
SMAD4-216ENST00000593223 CDKN2CP42773 168 aa4.06□□□□□ -1.76
SMAD4-216ENST00000593223 SLC1A4P43007 532 aa4.06□□□□□ -1.76
SMAD4-216ENST00000593223 ARRB1P49407 418 aaPredicted RBP4.06□□□□□ -1.76
SMAD4-216ENST00000593223 CDC34P49427 236 aaPredicted RBP4.06□□□□□ -1.76
SMAD4-216ENST00000593223 CASP4P49662 377 aa4.06□□□□□ -1.76
SMAD4-216ENST00000593223 TPMTP51580 245 aa4.06□□□□□ -1.76
SMAD4-216ENST00000593223 CDK16Q00536 496 aa4.06□□□□□ -1.76
SMAD4-216ENST00000593223 GLO1Q04760 184 aa4.06□□□□□ -1.76
SMAD4-216ENST00000593223 PJVKQ0ZLH3 352 aa4.06□□□□□ -1.76
SMAD4-216ENST00000593223 SRSF9Q13242 221 aaKnown RBP eCLIP4.06□□□□□ -1.76
SMAD4-216ENST00000593223 NFATC2Q13469 925 aa4.06□□□□□ -1.76
SMAD4-216ENST00000593223 GANABQ14697 944 aaKnown RBP4.06□□□□□ -1.76
SMAD4-216ENST00000593223 P2RY14Q15391 338 aa4.06□□□□□ -1.76
SMAD4-216ENST00000593223 KYAT1Q16773 422 aa4.06□□□□□ -1.76
SMAD4-216ENST00000593223 HIST2H2AA3Q6FI13 130 aa4.06□□□□□ -1.76
SMAD4-216ENST00000593223 LCLAT1Q6UWP7 414 aa4.06□□□□□ -1.76
SMAD4-216ENST00000593223 FAM151BQ6UXP7 276 aa4.06□□□□□ -1.76
SMAD4-216ENST00000593223 ANKRD33Q7Z3H0 272 aa4.06□□□□□ -1.76
SMAD4-216ENST00000593223 TEX26Q8N6G2 289 aa4.06□□□□□ -1.76
SMAD4-216ENST00000593223 OR51L1Q8NGJ5 315 aa4.06□□□□□ -1.76
SMAD4-216ENST00000593223 MARCH1Q8TCQ1 289 aa4.06□□□□□ -1.76
SMAD4-216ENST00000593223 PHYHIPQ92561 330 aa4.06□□□□□ -1.76
SMAD4-216ENST00000593223 NRGNQ92686 78 aa4.06□□□□□ -1.76
SMAD4-216ENST00000593223 ANKRD9Q96BM1 317 aaPredicted RBP4.06□□□□□ -1.76
SMAD4-216ENST00000593223 TM4SF19Q96DZ7 209 aa4.06□□□□□ -1.76
SMAD4-216ENST00000593223 ATXN7L3BQ96GX2 97 aa4.06□□□□□ -1.76
SMAD4-216ENST00000593223 PPP1R16AQ96I34 528 aa4.06□□□□□ -1.76
SMAD4-216ENST00000593223 FAM218AQ96MZ4 157 aa4.06□□□□□ -1.76
SMAD4-216ENST00000593223 MED10Q9BTT4 135 aa4.06□□□□□ -1.76
SMAD4-216ENST00000593223 ST6GALNAC5Q9BVH7 336 aa4.06□□□□□ -1.76
SMAD4-216ENST00000593223 RBM24Q9BX46 236 aaKnown RBP4.06□□□□□ -1.76
SMAD4-216ENST00000593223 GSDMCQ9BYG8 508 aa4.06□□□□□ -1.76
SMAD4-216ENST00000593223 SLC39A8Q9C0K1 460 aa4.06□□□□□ -1.76
SMAD4-216ENST00000593223 DPEP3Q9H4B8 488 aa4.06□□□□□ -1.76
SMAD4-216ENST00000593223 RAB9BQ9NP90 201 aa4.06□□□□□ -1.76
SMAD4-216ENST00000593223 DYRK4Q9NR20 520 aa4.06□□□□□ -1.76
SMAD4-216ENST00000593223 CLEC5AQ9NY25 188 aa4.06□□□□□ -1.76
SMAD4-216ENST00000593223 IFNKQ9P0W0 207 aa4.06□□□□□ -1.76
SMAD4-216ENST00000593223 FBXL4Q9UKA2 621 aa4.06□□□□□ -1.76
SMAD4-216ENST00000593223 PILRBQ9UKJ0 227 aa4.06□□□□□ -1.76
SMAD4-216ENST00000593223 POMT2Q9UKY4 750 aa4.06□□□□□ -1.76
SMAD4-216ENST00000593223 NSG2Q9Y328 171 aa4.06□□□□□ -1.76
SMAD4-216ENST00000593223 PLLPQ9Y342 182 aa4.06□□□□□ -1.76
SMAD4-216ENST00000593223 COL4A1P02462 1669 aa4.06□□□□□ -1.76
SMAD4-216ENST00000593223 TDRD15B5MCY1 1934 aaKnown RBP4.05□□□□□ -1.76
SMAD4-216ENST00000593223 LRRC37AA6NMS7 1700 aa4.05□□□□□ -1.76
SMAD4-216ENST00000593223 TRAV18A0A075B6X5 111 aa4.05□□□□□ -1.76
SMAD4-216ENST00000593223 RNF222A6NCQ9 220 aa4.05□□□□□ -1.76
SMAD4-216ENST00000593223 SMIM23A6NLE4 172 aa4.05□□□□□ -1.76
SMAD4-216ENST00000593223 ARHGEF33A8MVX0 844 aa4.05□□□□□ -1.76
SMAD4-216ENST00000593223 PRSS46E5RG02 174 aa4.05□□□□□ -1.76
SMAD4-216ENST00000593223 SGK494L7N484 410 aa4.05□□□□□ -1.76
SMAD4-216ENST00000593223 TOR1AO14656 332 aa4.05□□□□□ -1.76
SMAD4-216ENST00000593223 SCAMP2O15127 329 aaKnown RBP4.05□□□□□ -1.76
SMAD4-216ENST00000593223 EIF3HO15372 352 aaKnown RBP eCLIP4.05□□□□□ -1.76
SMAD4-216ENST00000593223 NBR2O15453 112 aa4.05□□□□□ -1.76
SMAD4-216ENST00000593223 ZSCAN12O43309 604 aa4.05□□□□□ -1.76
SMAD4-216ENST00000593223 LRCH4O75427 683 aa4.05□□□□□ -1.76
SMAD4-216ENST00000593223 NDUFA7O95182 113 aa4.05□□□□□ -1.76
SMAD4-216ENST00000593223 CST1P01037 141 aa4.05□□□□□ -1.76
SMAD4-216ENST00000593223 CHRNGP07510 517 aa4.05□□□□□ -1.76
SMAD4-216ENST00000593223 CPN1P15169 458 aa4.05□□□□□ -1.76
SMAD4-216ENST00000593223 PCMT1P22061 227 aa4.05□□□□□ -1.76
SMAD4-216ENST00000593223 CASP14P31944 242 aa4.05□□□□□ -1.76
SMAD4-216ENST00000593223 PCK1P35558 622 aa4.05□□□□□ -1.76
SMAD4-216ENST00000593223 ACADSBP45954 432 aa4.05□□□□□ -1.76
SMAD4-216ENST00000593223 TUFMP49411 452 aaKnown RBP4.05□□□□□ -1.76
SMAD4-216ENST00000593223 TNFSF10P50591 281 aa4.05□□□□□ -1.76
SMAD4-216ENST00000593223 CLDN18P56856 261 aa4.05□□□□□ -1.76
SMAD4-216ENST00000593223 OR1D5P58170 312 aa4.05□□□□□ -1.76
SMAD4-216ENST00000593223 MAGOHP61326 146 aaKnown RBP4.05□□□□□ -1.76
SMAD4-216ENST00000593223 MRPS25P82663 173 aaKnown RBP4.05□□□□□ -1.76
SMAD4-216ENST00000593223 STX3Q13277 289 aa4.05□□□□□ -1.76
SMAD4-216ENST00000593223 CCL14Q16627 93 aa4.05□□□□□ -1.76
SMAD4-216ENST00000593223 SLC5A12Q1EHB4 618 aa4.05□□□□□ -1.76
SMAD4-216ENST00000593223 MICBQ29980 383 aa4.05□□□□□ -1.76
SMAD4-216ENST00000593223 GOLGA7BQ2TAP0 167 aa4.05□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms