RNA–Protein interactions for RNA: ENST00000584655.5

RFFL-212, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 2 BASIC

Gene RFFL, Length 4,039 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-212ENST00000584655 FAM131CQ96AQ9 280 aa9.34□□□□□ -0.92
RFFL-212ENST00000584655 YIPF6Q96EC8 236 aa9.34□□□□□ -0.92
RFFL-212ENST00000584655 ALG12Q9BV10 488 aa9.34□□□□□ -0.92
RFFL-212ENST00000584655 GSTK1Q9Y2Q3 226 aa9.34□□□□□ -0.92
RFFL-212ENST00000584655 GABARAPO95166 117 aa9.33□□□□□ -0.92
RFFL-212ENST00000584655 SLC6A9P48067 706 aa9.33□□□□□ -0.92
RFFL-212ENST00000584655 GABARAPL2P60520 117 aa9.33□□□□□ -0.92
RFFL-212ENST00000584655 ADAM8P78325 824 aa9.33□□□□□ -0.92
RFFL-212ENST00000584655 ACKR1Q16570 336 aa9.33□□□□□ -0.92
RFFL-212ENST00000584655 MEPCEQ7L2J0 689 aaKnown RBP9.33□□□□□ -0.92
RFFL-212ENST00000584655 ZNF687Q8N1G0 1237 aa9.33□□□□□ -0.92
RFFL-212ENST00000584655 D2HGDHQ8N465 521 aa9.33□□□□□ -0.92
RFFL-212ENST00000584655 ZNF248Q8NDW4 579 aa9.33□□□□□ -0.92
RFFL-212ENST00000584655 OR51A4Q8NGJ6 313 aa9.33□□□□□ -0.92
RFFL-212ENST00000584655 OR5D18Q8NGL1 313 aa9.33□□□□□ -0.92
RFFL-212ENST00000584655 CTHRC1Q96CG8 243 aa9.33□□□□□ -0.92
RFFL-212ENST00000584655 AMELYQ99218 206 aa9.33□□□□□ -0.92
RFFL-212ENST00000584655 LOXL2Q9Y4K0 774 aa9.33□□□□□ -0.92
RFFL-212ENST00000584655 TRAV6A0A075B6T7 132 aa9.33□□□□□ -0.92
RFFL-212ENST00000584655 PSMD4P55036 377 aaKnown RBP9.33□□□□□ -0.92
RFFL-212ENST00000584655 CDK5Q00535 292 aa9.33□□□□□ -0.92
RFFL-212ENST00000584655 SIGLEC14Q08ET2 396 aa9.33□□□□□ -0.92
RFFL-212ENST00000584655 KRR1Q13601 381 aaKnown RBP9.33□□□□□ -0.92
RFFL-212ENST00000584655 SLC25A35Q3KQZ1 300 aa9.33□□□□□ -0.92
RFFL-212ENST00000584655 STEAP3Q658P3 488 aa9.33□□□□□ -0.92
RFFL-212ENST00000584655 USP43Q70EL4 1123 aa9.33□□□□□ -0.92
RFFL-212ENST00000584655 UBALD2Q8IYN6 164 aa9.33□□□□□ -0.92
RFFL-212ENST00000584655 ESX1Q8N693 406 aa9.33□□□□□ -0.92
RFFL-212ENST00000584655 EDEM2Q9BV94 578 aa9.33□□□□□ -0.92
RFFL-212ENST00000584655 VSX1Q9NZR4 365 aaPredicted RBP9.33□□□□□ -0.92
RFFL-212ENST00000584655 AKAP7Q9P0M2 348 aaPredicted RBP9.33□□□□□ -0.92
RFFL-212ENST00000584655 TEKT2Q9UIF3 430 aa9.33□□□□□ -0.92
RFFL-212ENST00000584655 SH3BGRL2Q9UJC5 107 aa9.33□□□□□ -0.92
RFFL-212ENST00000584655 COA3Q9Y2R0 106 aaPredicted RBP9.33□□□□□ -0.92
RFFL-212ENST00000584655 HTR3EA5X5Y0 456 aa9.33□□□□□ -0.92
RFFL-212ENST00000584655 GABRPO00591 440 aa9.33□□□□□ -0.92
RFFL-212ENST00000584655 TPD52L2O43399 206 aaKnown RBP9.33□□□□□ -0.92
RFFL-212ENST00000584655 TFP02787 698 aa9.33□□□□□ -0.92
RFFL-212ENST00000584655 CD3GP09693 182 aa9.33□□□□□ -0.92
RFFL-212ENST00000584655 MAGEA8P43361 318 aa9.33□□□□□ -0.92
RFFL-212ENST00000584655 PPICP45877 212 aa9.33□□□□□ -0.92
RFFL-212ENST00000584655 SRP9P49458 86 aaKnown RBP9.33□□□□□ -0.92
RFFL-212ENST00000584655 GPR143P51810 404 aa9.33□□□□□ -0.92
RFFL-212ENST00000584655 ZNF41P51814 821 aaPredicted RBP9.33□□□□□ -0.92
RFFL-212ENST00000584655 NIPAL3Q6P499 406 aa9.33□□□□□ -0.92
RFFL-212ENST00000584655 BORAQ6PGQ7 559 aa9.33□□□□□ -0.92
RFFL-212ENST00000584655 C3P1Q6ZMU1 363 aa9.33□□□□□ -0.92
RFFL-212ENST00000584655 ANKRD37Q7Z713 158 aa9.33□□□□□ -0.92
RFFL-212ENST00000584655 AKAP14Q86UN6 197 aa9.33□□□□□ -0.92
RFFL-212ENST00000584655 BEST4Q8NFU0 473 aa9.33□□□□□ -0.92
RFFL-212ENST00000584655 OR1N1Q8NGS0 311 aa9.33□□□□□ -0.92
RFFL-212ENST00000584655 DYNC2LI1Q8TCX1 351 aa9.33□□□□□ -0.92
RFFL-212ENST00000584655 ASB15Q8WXK1 588 aa9.33□□□□□ -0.92
RFFL-212ENST00000584655 RFT1Q96AA3 541 aa9.33□□□□□ -0.92
RFFL-212ENST00000584655 NXPE2Q96DL1 559 aa9.33□□□□□ -0.92
RFFL-212ENST00000584655 DERL3Q96Q80 235 aa9.33□□□□□ -0.92
RFFL-212ENST00000584655 DUSP23Q9BVJ7 150 aa9.33□□□□□ -0.92
RFFL-212ENST00000584655 IL20Q9NYY1 176 aa9.33□□□□□ -0.92
RFFL-212ENST00000584655 IL17BQ9UHF5 180 aa9.33□□□□□ -0.92
RFFL-212ENST00000584655 RASD1Q9Y272 281 aa9.33□□□□□ -0.92
RFFL-212ENST00000584655 KLHDC2Q9Y2U9 406 aa9.33□□□□□ -0.92
RFFL-212ENST00000584655 SYT5O00445 386 aa9.32□□□□□ -0.92
RFFL-212ENST00000584655 MPZL2O60487 215 aa9.32□□□□□ -0.92
RFFL-212ENST00000584655 RBMXP38159 391 aaKnown RBP9.32□□□□□ -0.92
RFFL-212ENST00000584655 SF3B4Q15427 424 aaKnown RBP eCLIP9.32□□□□□ -0.92
RFFL-212ENST00000584655 C12orf73Q69YU5 71 aa9.32□□□□□ -0.92
RFFL-212ENST00000584655 MAML2Q8IZL2 1156 aaPredicted RBP9.32□□□□□ -0.92
RFFL-212ENST00000584655 CADM3Q8N126 398 aa9.32□□□□□ -0.92
RFFL-212ENST00000584655 DTWD2Q8NBA8 298 aa9.32□□□□□ -0.92
RFFL-212ENST00000584655 OR4D9Q8NGE8 314 aa9.32□□□□□ -0.92
RFFL-212ENST00000584655 ZNF420Q8TAQ5 688 aaPredicted RBP9.32□□□□□ -0.92
RFFL-212ENST00000584655 SLC46A1Q96NT5 459 aa9.32□□□□□ -0.92
RFFL-212ENST00000584655 KIAA1549LQ6ZVL6 1849 aa9.32□□□□□ -0.92
RFFL-212ENST00000584655 A0A087WV62 115 aa9.32□□□□□ -0.92
RFFL-212ENST00000584655 MEX3AA1L020 520 aaKnown RBP9.32□□□□□ -0.92
RFFL-212ENST00000584655 D6RAR5 112 aa9.32□□□□□ -0.92
RFFL-212ENST00000584655 NPIPA5E9PKD4 350 aa9.32□□□□□ -0.92
RFFL-212ENST00000584655 CCL3P10147 92 aa9.32□□□□□ -0.92
RFFL-212ENST00000584655 DRD5P21918 477 aa9.32□□□□□ -0.92
RFFL-212ENST00000584655 SGCBQ16585 318 aa9.32□□□□□ -0.92
RFFL-212ENST00000584655 ACSM3Q53FZ2 586 aa9.32□□□□□ -0.92
RFFL-212ENST00000584655 YOD1Q5VVQ6 348 aaPredicted RBP9.32□□□□□ -0.92
RFFL-212ENST00000584655 CPEB2Q7Z5Q1 589 aaKnown RBP9.32□□□□□ -0.92
RFFL-212ENST00000584655 NANOGP1Q8N7R0 232 aa9.32□□□□□ -0.92
RFFL-212ENST00000584655 POGLUT1Q8NBL1 392 aa9.32□□□□□ -0.92
RFFL-212ENST00000584655 POP5Q969H6 163 aaKnown RBP9.32□□□□□ -0.92
RFFL-212ENST00000584655 STACQ99469 402 aa9.32□□□□□ -0.92
RFFL-212ENST00000584655 RBM24Q9BX46 236 aaKnown RBP9.32□□□□□ -0.92
RFFL-212ENST00000584655 SLIRPQ9GZT3 109 aaKnown RBP9.32□□□□□ -0.92
RFFL-212ENST00000584655 TESQ9UGI8 421 aaKnown RBP9.32□□□□□ -0.92
RFFL-212ENST00000584655 NPIPA1Q9UND3 350 aa9.32□□□□□ -0.92
RFFL-212ENST00000584655 A0A0G2JMM0 328 aa9.32□□□□□ -0.92
RFFL-212ENST00000584655 A0A1W2PPB8 328 aa9.32□□□□□ -0.92
RFFL-212ENST00000584655 A0A1W2PRS3 328 aa9.32□□□□□ -0.92
RFFL-212ENST00000584655 KIR3DP1A8MWS1 328 aa9.32□□□□□ -0.92
RFFL-212ENST00000584655 SBK2P0C263 348 aa9.32□□□□□ -0.92
RFFL-212ENST00000584655 PSKH1P11801 424 aa9.32□□□□□ -0.92
RFFL-212ENST00000584655 SNU13P55769 128 aaKnown RBP9.32□□□□□ -0.92
RFFL-212ENST00000584655 BIDP55957 195 aa9.32□□□□□ -0.92
RFFL-212ENST00000584655 RHAGQ02094 409 aa9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 129.3 ms