RNA–Protein interactions for RNA: ENST00000578519.5

SKA2-204, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 3

Gene SKA2, Length 894 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-204ENST00000578519 GABRPO00591 440 aa10.07□□□□□ -0.8
SKA2-204ENST00000578519 PLPP3O14495 311 aa10.07□□□□□ -0.8
SKA2-204ENST00000578519 OGG1O15527 345 aa10.07□□□□□ -0.8
SKA2-204ENST00000578519 ARHGEF9O43307 516 aa10.07□□□□□ -0.8
SKA2-204ENST00000578519 ITGA10O75578 1167 aa10.07□□□□□ -0.8
SKA2-204ENST00000578519 GATBO75879 557 aaKnown RBP10.07□□□□□ -0.8
SKA2-204ENST00000578519 ARL6IP5O75915 188 aa10.07□□□□□ -0.8
SKA2-204ENST00000578519 ZNF432O94892 652 aa10.07□□□□□ -0.8
SKA2-204ENST00000578519 MT-CO3P00414 261 aa10.07□□□□□ -0.8
SKA2-204ENST00000578519 IGHMP01871 453 aa10.07□□□□□ -0.8
SKA2-204ENST00000578519 F13BP05160 661 aa10.07□□□□□ -0.8
SKA2-204ENST00000578519 UMODP07911 640 aa10.07□□□□□ -0.8
SKA2-204ENST00000578519 MRPL3P09001 348 aaKnown RBP10.07□□□□□ -0.8
SKA2-204ENST00000578519 COX6A1P12074 109 aa10.07□□□□□ -0.8
SKA2-204ENST00000578519 NR2C1P13056 603 aa10.07□□□□□ -0.8
SKA2-204ENST00000578519 CD59P13987 128 aa10.07□□□□□ -0.8
SKA2-204ENST00000578519 MST1P26927 711 aa10.07□□□□□ -0.8
SKA2-204ENST00000578519 GRPRP30550 384 aa10.07□□□□□ -0.8
SKA2-204ENST00000578519 ACVR1BP36896 505 aa10.07□□□□□ -0.8
SKA2-204ENST00000578519 ETV6P41212 452 aa10.07□□□□□ -0.8
SKA2-204ENST00000578519 CDKN2AP42771 156 aaKnown RBP10.07□□□□□ -0.8
SKA2-204ENST00000578519 TGM4P49221 684 aa10.07□□□□□ -0.8
SKA2-204ENST00000578519 RPS25P62851 125 aaKnown RBP10.07□□□□□ -0.8
SKA2-204ENST00000578519 PPP3R1P63098 170 aa10.07□□□□□ -0.8
SKA2-204ENST00000578519 TOMM34Q15785 309 aaPredicted RBP10.07□□□□□ -0.8
SKA2-204ENST00000578519 TRIM16LQ309B1 348 aa10.07□□□□□ -0.8
SKA2-204ENST00000578519 CDONQ4KMG0 1287 aa10.07□□□□□ -0.8
SKA2-204ENST00000578519 DDI2Q5TDH0 399 aa10.07□□□□□ -0.8
SKA2-204ENST00000578519 SLC22A10Q63ZE4 541 aa10.07□□□□□ -0.8
SKA2-204ENST00000578519 DESI1Q6ICB0 168 aa10.07□□□□□ -0.8
SKA2-204ENST00000578519 C3orf33Q6P1S2 294 aa10.07□□□□□ -0.8
SKA2-204ENST00000578519 LYPD8Q6UX82 237 aa10.07□□□□□ -0.8
SKA2-204ENST00000578519 RAB43Q86YS6 212 aa10.07□□□□□ -0.8
SKA2-204ENST00000578519 TEX19Q8NA77 164 aa10.07□□□□□ -0.8
SKA2-204ENST00000578519 ADPRHL1Q8NDY3 354 aa10.07□□□□□ -0.8
SKA2-204ENST00000578519 NEIL3Q8TAT5 605 aa10.07□□□□□ -0.8
SKA2-204ENST00000578519 RASD2Q96D21 266 aa10.07□□□□□ -0.8
SKA2-204ENST00000578519 COX4I2Q96KJ9 171 aa10.07□□□□□ -0.8
SKA2-204ENST00000578519 C5orf34Q96MH7 638 aa10.07□□□□□ -0.8
SKA2-204ENST00000578519 WDFY2Q96P53 400 aa10.07□□□□□ -0.8
SKA2-204ENST00000578519 DDOQ99489 341 aa10.07□□□□□ -0.8
SKA2-204ENST00000578519 SLC30A2Q9BRI3 323 aa10.07□□□□□ -0.8
SKA2-204ENST00000578519 ZNF649Q9BS31 505 aa10.07□□□□□ -0.8
SKA2-204ENST00000578519 CCDC32Q9BV29 185 aa10.07□□□□□ -0.8
SKA2-204ENST00000578519 EDEM2Q9BV94 578 aa10.07□□□□□ -0.8
SKA2-204ENST00000578519 MFRPQ9BY79 579 aa10.07□□□□□ -0.8
SKA2-204ENST00000578519 RTN4RQ9BZR6 473 aa10.07□□□□□ -0.8
SKA2-204ENST00000578519 SMURF1Q9HCE7 757 aa10.07□□□□□ -0.8
SKA2-204ENST00000578519 SRA1Q9HD15 236 aaKnown RBP10.07□□□□□ -0.8
SKA2-204ENST00000578519 RPRD1BQ9NQG5 326 aaKnown RBP10.07□□□□□ -0.8
SKA2-204ENST00000578519 TBCCD1Q9NVR7 557 aa10.07□□□□□ -0.8
SKA2-204ENST00000578519 HPF1Q9NWY4 346 aa10.07□□□□□ -0.8
SKA2-204ENST00000578519 ALKBH4Q9NXW9 302 aa10.07□□□□□ -0.8
SKA2-204ENST00000578519 ABI3Q9P2A4 366 aa10.07□□□□□ -0.8
SKA2-204ENST00000578519 TEKT2Q9UIF3 430 aa10.07□□□□□ -0.8
SKA2-204ENST00000578519 B3GALT5Q9Y2C3 310 aa10.07□□□□□ -0.8
SKA2-204ENST00000578519 HDGFL3Q9Y3E1 203 aa10.07□□□□□ -0.8
SKA2-204ENST00000578519 CMAHPQ9Y471 501 aa10.07□□□□□ -0.8
SKA2-204ENST00000578519 B3GALT1Q9Y5Z6 326 aa10.07□□□□□ -0.8
SKA2-204ENST00000578519 HS3ST3B1Q9Y662 390 aa10.07□□□□□ -0.8
SKA2-204ENST00000578519 ADAMTS20P59510 1910 aa10.07□□□□□ -0.8
SKA2-204ENST00000578519 CDH23Q9H251 3354 aa10.06□□□□□ -0.8
SKA2-204ENST00000578519 ANKRD33BA6NCL7 494 aa10.06□□□□□ -0.8
SKA2-204ENST00000578519 OR6C68A6NDL8 312 aa10.06□□□□□ -0.8
SKA2-204ENST00000578519 GJE1A6NN92 205 aa10.06□□□□□ -0.8
SKA2-204ENST00000578519 NPIPA5E9PKD4 350 aa10.06□□□□□ -0.8
SKA2-204ENST00000578519 C11orf98E9PRG8 122 aa10.06□□□□□ -0.8
SKA2-204ENST00000578519 J3QRK9 145 aa10.06□□□□□ -0.8
SKA2-204ENST00000578519 CDK2AP1O14519 115 aa10.06□□□□□ -0.8
SKA2-204ENST00000578519 SLC19A2O60779 497 aa10.06□□□□□ -0.8
SKA2-204ENST00000578519 TMCC2O75069 709 aa10.06□□□□□ -0.8
SKA2-204ENST00000578519 LRP3O75074 770 aa10.06□□□□□ -0.8
SKA2-204ENST00000578519 SERPINI2O75830 405 aa10.06□□□□□ -0.8
SKA2-204ENST00000578519 KLF7O75840 302 aaPredicted RBP10.06□□□□□ -0.8
SKA2-204ENST00000578519 SULT1C4O75897 302 aa10.06□□□□□ -0.8
SKA2-204ENST00000578519 APOA1P02647 267 aa10.06□□□□□ -0.8
SKA2-204ENST00000578519 KRT8P05787 483 aa10.06□□□□□ -0.8
SKA2-204ENST00000578519 GYPBP06028 91 aa10.06□□□□□ -0.8
SKA2-204ENST00000578519 CLUP10909 449 aa10.06□□□□□ -0.8
SKA2-204ENST00000578519 BMP4P12644 408 aa10.06□□□□□ -0.8
SKA2-204ENST00000578519 PTBP1P26599 531 aaKnown RBP eCLIP10.06□□□□□ -0.81e-9■■■■■ 38.2
SKA2-204ENST00000578519 PYCR1P32322 319 aa10.06□□□□□ -0.8
SKA2-204ENST00000578519 MLF1P58340 268 aa10.06□□□□□ -0.8
SKA2-204ENST00000578519 SIRPAP78324 504 aa10.06□□□□□ -0.8
SKA2-204ENST00000578519 FABP5Q01469 135 aa10.06□□□□□ -0.8
SKA2-204ENST00000578519 ZNF85Q03923 595 aa10.06□□□□□ -0.8
SKA2-204ENST00000578519 EGR3Q06889 387 aa10.06□□□□□ -0.8
SKA2-204ENST00000578519 PUDPQ08623 228 aa10.06□□□□□ -0.8
SKA2-204ENST00000578519 SELENBP1Q13228 472 aa10.06□□□□□ -0.8
SKA2-204ENST00000578519 ATP1A4Q13733 1029 aa10.06□□□□□ -0.8
SKA2-204ENST00000578519 GLYR1Q49A26 553 aaPredicted RBP10.06□□□□□ -0.8
SKA2-204ENST00000578519 CCDC157Q569K6 752 aa10.06□□□□□ -0.8
SKA2-204ENST00000578519 EEF1A1P5Q5VTE0 462 aa10.06□□□□□ -0.8
SKA2-204ENST00000578519 CDCP2Q5VXM1 449 aa10.06□□□□□ -0.8
SKA2-204ENST00000578519 TCEAL6Q6IPX3 200 aa10.06□□□□□ -0.8
SKA2-204ENST00000578519 JMJD6Q6NYC1 403 aaPredicted RBP10.06□□□□□ -0.8
SKA2-204ENST00000578519 ARL9Q6T311 187 aa10.06□□□□□ -0.8
SKA2-204ENST00000578519 METAP1DQ6UB28 335 aaPredicted RBP10.06□□□□□ -0.8
SKA2-204ENST00000578519 IL20RBQ6UXL0 311 aa10.06□□□□□ -0.8
SKA2-204ENST00000578519 PLCZ1Q86YW0 608 aa10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms