RNA–Protein interactions for RNA: ENST00000576484.1

CDC27-219, Transcript of cell division cycle 27, humanhuman

TSL 5

Gene CDC27, Length 548 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC27-219ENST00000576484 ECHDC2Q86YB7 292 aa3.01□□□□□ -1.93
CDC27-219ENST00000576484 PIANPQ8IYJ0 282 aa3.01□□□□□ -1.93
CDC27-219ENST00000576484 OR4F15Q8NGB8 312 aa3.01□□□□□ -1.93
CDC27-219ENST00000576484 FAM110BQ8TC76 370 aa3.01□□□□□ -1.93
CDC27-219ENST00000576484 FGF14Q92915 247 aa3.01□□□□□ -1.93
CDC27-219ENST00000576484 PELOQ9BRX2 385 aaKnown RBP3.01□□□□□ -1.93
CDC27-219ENST00000576484 CLMPQ9H6B4 373 aa3.01□□□□□ -1.93
CDC27-219ENST00000576484 LY9Q9HBG7 655 aa3.01□□□□□ -1.93
CDC27-219ENST00000576484 CDH9Q9ULB4 789 aa3.01□□□□□ -1.93
CDC27-219ENST00000576484 PSG11Q9UQ72 335 aa3.01□□□□□ -1.93
CDC27-219ENST00000576484 C15orf38-AP3S2A0A0A6YYH1 394 aa3□□□□□ -1.93
CDC27-219ENST00000576484 OR5B21A6NL26 309 aa3□□□□□ -1.93
CDC27-219ENST00000576484 PNMA6AP0CW24 399 aaPredicted RBP3□□□□□ -1.93
CDC27-219ENST00000576484 DBTP11182 482 aaKnown RBP3□□□□□ -1.93
CDC27-219ENST00000576484 RPS2P15880 293 aaKnown RBP3□□□□□ -1.93
CDC27-219ENST00000576484 GLRA2P23416 452 aa3□□□□□ -1.93
CDC27-219ENST00000576484 HOXA9P31269 272 aa3□□□□□ -1.93
CDC27-219ENST00000576484 MAGEA8P43361 318 aa3□□□□□ -1.93
CDC27-219ENST00000576484 NMUP48645 174 aa3□□□□□ -1.93
CDC27-219ENST00000576484 SUCLG1P53597 346 aaKnown RBP3□□□□□ -1.93
CDC27-219ENST00000576484 UBE2HP62256 183 aa3□□□□□ -1.93
CDC27-219ENST00000576484 GGTLC2Q14390 218 aa3□□□□□ -1.93
CDC27-219ENST00000576484 RFX4Q33E94 735 aa3□□□□□ -1.93
CDC27-219ENST00000576484 UQCC3Q6UW78 93 aa3□□□□□ -1.93
CDC27-219ENST00000576484 ENPP6Q6UWR7 440 aa3□□□□□ -1.93
CDC27-219ENST00000576484 LINC01551Q86U37 167 aa3□□□□□ -1.93
CDC27-219ENST00000576484 FNDC5Q8NAU1 212 aa3□□□□□ -1.93
CDC27-219ENST00000576484 DUSP18Q8NEJ0 188 aa3□□□□□ -1.93
CDC27-219ENST00000576484 OR10G9Q8NGN4 311 aa3□□□□□ -1.93
CDC27-219ENST00000576484 SCFD1Q8WVM8 642 aa3□□□□□ -1.93
CDC27-219ENST00000576484 GIMAP1Q8WWP7 306 aa3□□□□□ -1.93
CDC27-219ENST00000576484 STARD4Q96DR4 205 aa3□□□□□ -1.93
CDC27-219ENST00000576484 RPRD1AQ96P16 312 aaPredicted RBP3□□□□□ -1.93
CDC27-219ENST00000576484 COPS8Q99627 209 aa3□□□□□ -1.93
CDC27-219ENST00000576484 GBA3Q9H227 469 aa3□□□□□ -1.93
CDC27-219ENST00000576484 CDC42EP4Q9H3Q1 356 aaKnown RBP3□□□□□ -1.93
CDC27-219ENST00000576484 RANBP3Q9H6Z4 567 aaPredicted RBP3□□□□□ -1.93
CDC27-219ENST00000576484 ZFP14Q9HCL3 533 aa3□□□□□ -1.93
CDC27-219ENST00000576484 HEBP2Q9Y5Z4 205 aa3□□□□□ -1.93
CDC27-219ENST00000576484 IGLV4-69A0A075B6H9 119 aa2.99□□□□□ -1.93
CDC27-219ENST00000576484 IGLV3-22A0A075B6J6 115 aa2.99□□□□□ -1.93
CDC27-219ENST00000576484 ZNF208O43345 1280 aa2.99□□□□□ -1.93
CDC27-219ENST00000576484 SS18L1O75177 396 aaPredicted RBP2.99□□□□□ -1.93
CDC27-219ENST00000576484 SUPT3HO75486 399 aa2.99□□□□□ -1.93
CDC27-219ENST00000576484 ALDOBP05062 364 aa2.99□□□□□ -1.93
CDC27-219ENST00000576484 CAPN1P07384 714 aa2.99□□□□□ -1.93
CDC27-219ENST00000576484 PLEKP08567 350 aaPredicted RBP2.99□□□□□ -1.93
CDC27-219ENST00000576484 MAGP20916 626 aa2.99□□□□□ -1.93
CDC27-219ENST00000576484 SLC26A3P40879 764 aa2.99□□□□□ -1.93
CDC27-219ENST00000576484 HERVK_113P61574 105 aa2.99□□□□□ -1.93
CDC27-219ENST00000576484 PTGES3Q15185 160 aaKnown RBP2.99□□□□□ -1.93
CDC27-219ENST00000576484 OR52W1Q6IF63 320 aa2.99□□□□□ -1.93
CDC27-219ENST00000576484 LCN12Q6JVE5 192 aa2.99□□□□□ -1.93
CDC27-219ENST00000576484 THOC6Q86W42 341 aaKnown RBP2.99□□□□□ -1.93
CDC27-219ENST00000576484 TRIM69Q86WT6 500 aa2.99□□□□□ -1.93
CDC27-219ENST00000576484 C10orf35Q96D05 121 aa2.99□□□□□ -1.93
CDC27-219ENST00000576484 ZNF641Q96N77 438 aaPredicted RBP2.99□□□□□ -1.93
CDC27-219ENST00000576484 VCXQ9H320 206 aa2.99□□□□□ -1.93
CDC27-219ENST00000576484 GLRX2Q9NS18 164 aa2.99□□□□□ -1.93
CDC27-219ENST00000576484 ZNF226Q9NYT6 803 aa2.99□□□□□ -1.93
CDC27-219ENST00000576484 CALYQ9NYX4 217 aa2.99□□□□□ -1.93
CDC27-219ENST00000576484 XCL2Q9UBD3 114 aa2.99□□□□□ -1.93
CDC27-219ENST00000576484 COL4A4P53420 1690 aaPredicted RBP2.98□□□□□ -1.93
CDC27-219ENST00000576484 SLC31A2O15432 143 aa2.98□□□□□ -1.93
CDC27-219ENST00000576484 TOM1O60784 492 aa2.98□□□□□ -1.93
CDC27-219ENST00000576484 CLDN9O95484 217 aa2.98□□□□□ -1.93
CDC27-219ENST00000576484 CXCL5P42830 114 aa2.98□□□□□ -1.93
CDC27-219ENST00000576484 HNMTP50135 292 aa2.98□□□□□ -1.93
CDC27-219ENST00000576484 FGF8P55075 233 aaPredicted RBP2.98□□□□□ -1.93
CDC27-219ENST00000576484 LINC00315P59091 139 aa2.98□□□□□ -1.93
CDC27-219ENST00000576484 IL24Q13007 206 aa2.98□□□□□ -1.93
CDC27-219ENST00000576484 GPM6BQ13491 265 aa2.98□□□□□ -1.93
CDC27-219ENST00000576484 SGCAQ16586 387 aa2.98□□□□□ -1.93
CDC27-219ENST00000576484 RSPO1Q2MKA7 263 aaPredicted RBP2.98□□□□□ -1.93
CDC27-219ENST00000576484 TMEM255AQ5JRV8 349 aa2.98□□□□□ -1.93
CDC27-219ENST00000576484 PMF1Q6P1K2 205 aa2.98□□□□□ -1.93
CDC27-219ENST00000576484 KRTAP5-2Q701N4 177 aa2.98□□□□□ -1.93
CDC27-219ENST00000576484 NUDCD3Q8IVD9 361 aa2.98□□□□□ -1.93
CDC27-219ENST00000576484 SMARCD2Q92925 531 aa2.98□□□□□ -1.93
CDC27-219ENST00000576484 TBRG4Q969Z0 631 aaKnown RBP eCLIP2.98□□□□□ -1.93
CDC27-219ENST00000576484 LRRC58Q96CX6 371 aa2.98□□□□□ -1.93
CDC27-219ENST00000576484 ASB9Q96DX5 294 aa2.98□□□□□ -1.93
CDC27-219ENST00000576484 SLC41A3Q96GZ6 507 aa2.98□□□□□ -1.93
CDC27-219ENST00000576484 CEP170P1Q96L14 293 aa2.98□□□□□ -1.93
CDC27-219ENST00000576484 PSKH2Q96QS6 385 aa2.98□□□□□ -1.93
CDC27-219ENST00000576484 TRIM62Q9BVG3 475 aa2.98□□□□□ -1.93
CDC27-219ENST00000576484 LCE3DQ9BYE3 92 aa2.98□□□□□ -1.93
CDC27-219ENST00000576484 DNTTIP1Q9H147 329 aa2.98□□□□□ -1.93
CDC27-219ENST00000576484 MCCC2Q9HCC0 563 aa2.98□□□□□ -1.93
CDC27-219ENST00000576484 SPATA7Q9P0W8 599 aa2.98□□□□□ -1.93
CDC27-219ENST00000576484 TBX21Q9UL17 535 aa2.98□□□□□ -1.93
CDC27-219ENST00000576484 CLEC4AQ9UMR7 237 aa2.98□□□□□ -1.93
CDC27-219ENST00000576484 ASTN1O14525 1302 aa2.97□□□□□ -1.93
CDC27-219ENST00000576484 FANCIQ9NVI1 1328 aa2.97□□□□□ -1.93
CDC27-219ENST00000576484 IGKV2D-24A0A075B6R9 120 aa2.97□□□□□ -1.93
CDC27-219ENST00000576484 DLGAP1O14490 977 aa2.97□□□□□ -1.93
CDC27-219ENST00000576484 IGLV2-23P01705 113 aa2.97□□□□□ -1.93
CDC27-219ENST00000576484 HPGDP15428 266 aa2.97□□□□□ -1.93
CDC27-219ENST00000576484 GBX2P52951 348 aaPredicted RBP2.97□□□□□ -1.93
CDC27-219ENST00000576484 ARFIP1P53367 373 aa2.97□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms