RNA–Protein interactions for RNA: ENST00000574322.5

CTDNEP1-210, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTDNEP1, Length 1,708 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-210ENST00000574322 OR10H4Q8NGA5 316 aa25.67■■□□□ 1.7
CTDNEP1-210ENST00000574322 ZPLD1Q8TCW7 415 aa25.67■■□□□ 1.7
CTDNEP1-210ENST00000574322 PAQR8Q8TEZ7 354 aa25.67■■□□□ 1.7
CTDNEP1-210ENST00000574322 SNX18Q96RF0 628 aa25.67■■□□□ 1.7
CTDNEP1-210ENST00000574322 NXF2Q9GZY0 626 aaKnown RBP25.67■■□□□ 1.7
CTDNEP1-210ENST00000574322 PLGRKTQ9HBL7 147 aa25.67■■□□□ 1.7
CTDNEP1-210ENST00000574322 SSR3Q9UNL2 185 aa25.67■■□□□ 1.7
CTDNEP1-210ENST00000574322 MOKQ9UQ07 419 aa25.67■■□□□ 1.7
CTDNEP1-210ENST00000574322 PCDHGB7Q9Y5F8 929 aa25.67■■□□□ 1.7
CTDNEP1-210ENST00000574322 CORINQ9Y5Q5 1042 aa25.67■■□□□ 1.7
CTDNEP1-210ENST00000574322 PTPRBP23467 1997 aa25.67■■□□□ 1.7
CTDNEP1-210ENST00000574322 GLCEO94923 617 aa25.66■■□□□ 1.7
CTDNEP1-210ENST00000574322 GABRA5P31644 462 aa25.66■■□□□ 1.7
CTDNEP1-210ENST00000574322 GABREP78334 506 aa25.66■■□□□ 1.7
CTDNEP1-210ENST00000574322 DNASE1L3Q13609 305 aa25.66■■□□□ 1.7
CTDNEP1-210ENST00000574322 ZNF829Q3KNS6 432 aaPredicted RBP25.66■■□□□ 1.7
CTDNEP1-210ENST00000574322 SLC25A36Q96CQ1 311 aa25.66■■□□□ 1.7
CTDNEP1-210ENST00000574322 CNN2Q99439 309 aaKnown RBP25.66■■□□□ 1.7
CTDNEP1-210ENST00000574322 SCNM1Q9BWG6 230 aa25.66■■□□□ 1.7
CTDNEP1-210ENST00000574322 INIPQ9NRY2 104 aa25.66■■□□□ 1.7
CTDNEP1-210ENST00000574322 BABAM2Q9NXR7 383 aa25.66■■□□□ 1.7
CTDNEP1-210ENST00000574322 VDAC3Q9Y277 283 aa25.66■■□□□ 1.7
CTDNEP1-210ENST00000574322 PLPP3O14495 311 aa25.66■■□□□ 1.7
CTDNEP1-210ENST00000574322 IGHMP01871 453 aa25.66■■□□□ 1.7
CTDNEP1-210ENST00000574322 OR2T7P0C7T2 308 aa25.66■■□□□ 1.7
CTDNEP1-210ENST00000574322 SPINK2P20155 84 aa25.66■■□□□ 1.7
CTDNEP1-210ENST00000574322 BMXP51813 675 aa25.66■■□□□ 1.7
CTDNEP1-210ENST00000574322 ZNF85Q03923 595 aa25.66■■□□□ 1.7
CTDNEP1-210ENST00000574322 DBPQ10586 325 aaPredicted RBP25.66■■□□□ 1.7
CTDNEP1-210ENST00000574322 KRR1Q13601 381 aaKnown RBP25.66■■□□□ 1.7
CTDNEP1-210ENST00000574322 MESTQ5EB52 335 aa25.66■■□□□ 1.7
CTDNEP1-210ENST00000574322 LINC01590Q5TEZ4 76 aa25.66■■□□□ 1.7
CTDNEP1-210ENST00000574322 GPALPP1Q8IXQ4 340 aa25.66■■□□□ 1.7
CTDNEP1-210ENST00000574322 SCAIQ8N9R8 606 aa25.66■■□□□ 1.7
CTDNEP1-210ENST00000574322 NLGN4YQ8NFZ3 816 aaPredicted RBP25.66■■□□□ 1.7
CTDNEP1-210ENST00000574322 OR2T27Q8NH04 317 aa25.66■■□□□ 1.7
CTDNEP1-210ENST00000574322 POC1BQ8TC44 478 aa25.66■■□□□ 1.7
CTDNEP1-210ENST00000574322 DDIT4LQ96D03 193 aa25.66■■□□□ 1.7
CTDNEP1-210ENST00000574322 ZMYND19Q96E35 227 aaPredicted RBP25.66■■□□□ 1.7
CTDNEP1-210ENST00000574322 MMP27Q9H306 513 aa25.66■■□□□ 1.7
CTDNEP1-210ENST00000574322 ZNF346Q9UL40 294 aaKnown RBP25.66■■□□□ 1.7
CTDNEP1-210ENST00000574322 METTL15A6NJ78 407 aa25.65■■□□□ 1.7
CTDNEP1-210ENST00000574322 ZNF670-ZNF695F2Z2N8 137 aa25.65■■□□□ 1.7
CTDNEP1-210ENST00000574322 ADH6P28332 368 aa25.65■■□□□ 1.7
CTDNEP1-210ENST00000574322 Q0VFX4 171 aa25.65■■□□□ 1.7
CTDNEP1-210ENST00000574322 ZP4Q12836 540 aa25.65■■□□□ 1.7
CTDNEP1-210ENST00000574322 ZNRF4Q8WWF5 429 aa25.65■■□□□ 1.7
CTDNEP1-210ENST00000574322 C1GALT1C1Q96EU7 318 aa25.65■■□□□ 1.7
CTDNEP1-210ENST00000574322 COQ7Q99807 217 aa25.65■■□□□ 1.7
CTDNEP1-210ENST00000574322 ISG20L2Q9H9L3 353 aaKnown RBP25.65■■□□□ 1.7
CTDNEP1-210ENST00000574322 WASF3Q9UPY6 502 aa25.65■■□□□ 1.7
CTDNEP1-210ENST00000574322 ANKRD33BA6NCL7 494 aa25.64■■□□□ 1.7
CTDNEP1-210ENST00000574322 TNFSF15O95150 251 aa25.64■■□□□ 1.7
CTDNEP1-210ENST00000574322 SERPINA7P05543 415 aa25.64■■□□□ 1.7
CTDNEP1-210ENST00000574322 MRPL3P09001 348 aaKnown RBP25.64■■□□□ 1.7
CTDNEP1-210ENST00000574322 ARIH2OSQ8N7S6 290 aa25.64■■□□□ 1.7
CTDNEP1-210ENST00000574322 OR6Q1Q8NGQ2 317 aa25.64■■□□□ 1.7
CTDNEP1-210ENST00000574322 TRMT61AQ96FX7 289 aaKnown RBP25.64■■□□□ 1.7
CTDNEP1-210ENST00000574322 PTGES2Q9H7Z7 377 aa25.64■■□□□ 1.7
CTDNEP1-210ENST00000574322 P4HTMQ9NXG6 502 aa25.64■■□□□ 1.7
CTDNEP1-210ENST00000574322 A0A1W2PQL4 384 aaPredicted RBP25.63■■□□□ 1.69
CTDNEP1-210ENST00000574322 EFNA2O43921 213 aa25.63■■□□□ 1.69
CTDNEP1-210ENST00000574322 TFP02787 698 aa25.63■■□□□ 1.69
CTDNEP1-210ENST00000574322 MT-ND5P03915 603 aa25.63■■□□□ 1.69
CTDNEP1-210ENST00000574322 GAAP10253 952 aa25.63■■□□□ 1.69
CTDNEP1-210ENST00000574322 FGF9P31371 208 aaPredicted RBP25.63■■□□□ 1.69
CTDNEP1-210ENST00000574322 CAMK2BQ13554 666 aa25.63■■□□□ 1.69
CTDNEP1-210ENST00000574322 ZNF404Q494X3 552 aa25.63■■□□□ 1.69
CTDNEP1-210ENST00000574322 SLC6A19Q695T7 634 aa25.63■■□□□ 1.69
CTDNEP1-210ENST00000574322 PLCZ1Q86YW0 608 aa25.63■■□□□ 1.69
CTDNEP1-210ENST00000574322 SGCZQ96LD1 299 aa25.63■■□□□ 1.69
CTDNEP1-210ENST00000574322 TXNIPQ9H3M7 391 aa25.63■■□□□ 1.69
CTDNEP1-210ENST00000574322 EXOSC4Q9NPD3 245 aaKnown RBP25.63■■□□□ 1.69
CTDNEP1-210ENST00000574322 FBXL2Q9UKC9 423 aa25.63■■□□□ 1.69
CTDNEP1-210ENST00000574322 A0A087WZY1 265 aa25.63■■□□□ 1.69
CTDNEP1-210ENST00000574322 GALP22466 123 aa25.63■■□□□ 1.69
CTDNEP1-210ENST00000574322 FKBP2P26885 142 aaKnown RBP25.63■■□□□ 1.69
CTDNEP1-210ENST00000574322 EIF1P41567 113 aaKnown RBP25.63■■□□□ 1.69
CTDNEP1-210ENST00000574322 INPP5JQ15735 1006 aaPredicted RBP25.63■■□□□ 1.69
CTDNEP1-210ENST00000574322 SLC22A10Q63ZE4 541 aa25.63■■□□□ 1.69
CTDNEP1-210ENST00000574322 KLBQ86Z14 1044 aa25.63■■□□□ 1.69
CTDNEP1-210ENST00000574322 TMEM156Q8N614 296 aa25.63■■□□□ 1.69
CTDNEP1-210ENST00000574322 ZNF417Q8TAU3 575 aa25.63■■□□□ 1.69
CTDNEP1-210ENST00000574322 ARL5BQ96KC2 179 aa25.63■■□□□ 1.69
CTDNEP1-210ENST00000574322 ZNF587Q96SQ5 575 aaPredicted RBP25.63■■□□□ 1.69
CTDNEP1-210ENST00000574322 TBX5Q99593 518 aa25.63■■□□□ 1.69
CTDNEP1-210ENST00000574322 CDADC1Q9BWV3 514 aa25.63■■□□□ 1.69
CTDNEP1-210ENST00000574322 PROK2Q9HC23 129 aa25.63■■□□□ 1.69
CTDNEP1-210ENST00000574322 SERINC1Q9NRX5 453 aa25.63■■□□□ 1.69
CTDNEP1-210ENST00000574322 TXNL4BQ9NX01 149 aaKnown RBP25.63■■□□□ 1.69
CTDNEP1-210ENST00000574322 TRDV1A0A1B0GX56 115 aa25.62■■□□□ 1.69
CTDNEP1-210ENST00000574322 FAM47E-STBD1D6RA91 191 aa25.62■■□□□ 1.69
CTDNEP1-210ENST00000574322 ADRB1P08588 477 aa25.62■■□□□ 1.69
CTDNEP1-210ENST00000574322 CD53P19397 219 aa25.62■■□□□ 1.69
CTDNEP1-210ENST00000574322 RBMS1P29558 406 aaKnown RBP25.62■■□□□ 1.69
CTDNEP1-210ENST00000574322 RPL27P61353 136 aaKnown RBP25.62■■□□□ 1.69
CTDNEP1-210ENST00000574322 RPS25P62851 125 aaKnown RBP25.62■■□□□ 1.69
CTDNEP1-210ENST00000574322 ATP6V1C2Q8NEY4 427 aa25.62■■□□□ 1.69
CTDNEP1-210ENST00000574322 OR4K17Q8NGC6 315 aa25.62■■□□□ 1.69
CTDNEP1-210ENST00000574322 OR51L1Q8NGJ5 315 aa25.62■■□□□ 1.69
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms