RNA–Protein interactions for RNA: ENST00000566560.5

KARS-207, Transcript of lysyl-tRNA synthetase, humanhuman

TSL 1 (best)

Gene KARS, Length 1,231 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KARS-207ENST00000566560 RPL18Q07020 188 aaKnown RBP10.21□□□□□ -0.77
KARS-207ENST00000566560 FOXF2Q12947 444 aa10.21□□□□□ -0.77
KARS-207ENST00000566560 PDK3Q15120 406 aa10.21□□□□□ -0.77
KARS-207ENST00000566560 POU4F3Q15319 338 aa10.21□□□□□ -0.77
KARS-207ENST00000566560 TMEM201Q5SNT2 666 aa10.21□□□□□ -0.77
KARS-207ENST00000566560 EEF1A1P5Q5VTE0 462 aa10.21□□□□□ -0.77
KARS-207ENST00000566560 TMEM225Q6GV28 225 aa10.21□□□□□ -0.77
KARS-207ENST00000566560 ZNF770Q6IQ21 691 aaPredicted RBP10.21□□□□□ -0.77
KARS-207ENST00000566560 HMBOX1Q6NT76 420 aa10.21□□□□□ -0.77
KARS-207ENST00000566560 SHQ1Q6PI26 577 aaKnown RBP10.21□□□□□ -0.77
KARS-207ENST00000566560 TMPRSS11FQ6ZWK6 438 aa10.21□□□□□ -0.77
KARS-207ENST00000566560 ZER1Q7Z7L7 766 aa10.21□□□□□ -0.77
KARS-207ENST00000566560 TMEM179BQ7Z7N9 219 aa10.21□□□□□ -0.77
KARS-207ENST00000566560 OAFQ86UD1 273 aa10.21□□□□□ -0.77
KARS-207ENST00000566560 OR9K2Q8NGE7 335 aa10.21□□□□□ -0.77
KARS-207ENST00000566560 FANK1Q8TC84 345 aa10.21□□□□□ -0.77
KARS-207ENST00000566560 GIPC3Q8TF64 312 aa10.21□□□□□ -0.77
KARS-207ENST00000566560 LIPHQ8WWY8 451 aa10.21□□□□□ -0.77
KARS-207ENST00000566560 SDCCAG3Q96C92 435 aa10.21□□□□□ -0.77
KARS-207ENST00000566560 CENPNQ96H22 339 aaPredicted RBP10.21□□□□□ -0.77
KARS-207ENST00000566560 PKP2Q99959 881 aa10.21□□□□□ -0.77
KARS-207ENST00000566560 TACO1Q9BSH4 297 aaKnown RBP10.21□□□□□ -0.77
KARS-207ENST00000566560 SF3B5Q9BWJ5 86 aaKnown RBP10.21□□□□□ -0.77
KARS-207ENST00000566560 SFXN3Q9BWM7 321 aa10.21□□□□□ -0.77
KARS-207ENST00000566560 NDEL1Q9GZM8 345 aa10.21□□□□□ -0.77
KARS-207ENST00000566560 SEMA6AQ9H2E6 1030 aa10.21□□□□□ -0.77
KARS-207ENST00000566560 BCO1Q9HAY6 547 aa10.21□□□□□ -0.77
KARS-207ENST00000566560 NTN4Q9HB63 628 aa10.21□□□□□ -0.77
KARS-207ENST00000566560 GP6Q9HCN6 339 aa10.21□□□□□ -0.77
KARS-207ENST00000566560 PDP1Q9P0J1 537 aaPredicted RBP10.21□□□□□ -0.77
KARS-207ENST00000566560 KIF17Q9P2E2 1029 aa10.21□□□□□ -0.77
KARS-207ENST00000566560 B3GAT1Q9P2W7 334 aa10.21□□□□□ -0.77
KARS-207ENST00000566560 Q9UFV3 132 aa10.21□□□□□ -0.77
KARS-207ENST00000566560 RNF6Q9Y252 685 aa10.21□□□□□ -0.77
KARS-207ENST00000566560 IGKV3D-15A0A087WSY6 115 aa10.2□□□□□ -0.78
KARS-207ENST00000566560 UNC119BA6NIH7 251 aa10.2□□□□□ -0.78
KARS-207ENST00000566560 SAC3D1A6NKF1 404 aa10.2□□□□□ -0.78
KARS-207ENST00000566560 ZNF724A8MTY0 619 aa10.2□□□□□ -0.78
KARS-207ENST00000566560 C11orf98E9PRG8 122 aa10.2□□□□□ -0.78
KARS-207ENST00000566560 BLOC1S5-TXNDC5H3BN57 136 aa10.2□□□□□ -0.78
KARS-207ENST00000566560 GPR171O14626 319 aa10.2□□□□□ -0.78
KARS-207ENST00000566560 KLF4O43474 513 aa10.2□□□□□ -0.78
KARS-207ENST00000566560 RNF13O43567 381 aa10.2□□□□□ -0.78
KARS-207ENST00000566560 HPRP00739 348 aa10.2□□□□□ -0.78
KARS-207ENST00000566560 ADAP00813 363 aa10.2□□□□□ -0.78
KARS-207ENST00000566560 CRHP06850 196 aa10.2□□□□□ -0.78
KARS-207ENST00000566560 POU2F1P14859 743 aa10.2□□□□□ -0.78
KARS-207ENST00000566560 ZNF43P17038 809 aa10.2□□□□□ -0.78
KARS-207ENST00000566560 AHCYP23526 432 aa10.2□□□□□ -0.78
KARS-207ENST00000566560 CTSSP25774 331 aa10.2□□□□□ -0.78
KARS-207ENST00000566560 UQCRC1P31930 480 aa10.2□□□□□ -0.78
KARS-207ENST00000566560 SMSP52788 366 aa10.2□□□□□ -0.78
KARS-207ENST00000566560 RPS4XP62701 263 aaKnown RBP10.2□□□□□ -0.78
KARS-207ENST00000566560 SPTBN1Q01082 2364 aaKnown RBP10.2□□□□□ -0.78
KARS-207ENST00000566560 C1DQ13901 141 aaKnown RBP10.2□□□□□ -0.78
KARS-207ENST00000566560 SLC17A1Q14916 467 aa10.2□□□□□ -0.78
KARS-207ENST00000566560 RCN1Q15293 331 aa10.2□□□□□ -0.78
KARS-207ENST00000566560 GUSBP1Q15486 140 aa10.2□□□□□ -0.78
KARS-207ENST00000566560 C1orf94Q6P1W5 598 aa10.2□□□□□ -0.78
KARS-207ENST00000566560 FAM214BQ7L5A3 538 aa10.2□□□□□ -0.78
KARS-207ENST00000566560 CCDC71Q8IV32 467 aaPredicted RBP10.2□□□□□ -0.78
KARS-207ENST00000566560 UEVLDQ8IX04 471 aa10.2□□□□□ -0.78
KARS-207ENST00000566560 TUSC5Q8IXB3 177 aa10.2□□□□□ -0.78
KARS-207ENST00000566560 HS3ST5Q8IZT8 346 aa10.2□□□□□ -0.78
KARS-207ENST00000566560 PQLC1Q8N2U9 271 aa10.2□□□□□ -0.78
KARS-207ENST00000566560 KDM8Q8N371 416 aa10.2□□□□□ -0.78
KARS-207ENST00000566560 ICA1LQ8NDH6 482 aa10.2□□□□□ -0.78
KARS-207ENST00000566560 OR51A7Q8NH64 312 aa10.2□□□□□ -0.78
KARS-207ENST00000566560 OR5K1Q8NHB7 308 aa10.2□□□□□ -0.78
KARS-207ENST00000566560 GNPDA2Q8TDQ7 276 aa10.2□□□□□ -0.78
KARS-207ENST00000566560 GTPBP3Q969Y2 492 aaKnown RBP10.2□□□□□ -0.78
KARS-207ENST00000566560 OXGR1Q96P68 337 aa10.2□□□□□ -0.78
KARS-207ENST00000566560 GPA33Q99795 319 aa10.2□□□□□ -0.78
KARS-207ENST00000566560 COQ3Q9NZJ6 369 aa10.2□□□□□ -0.78
KARS-207ENST00000566560 ING1Q9UK53 422 aaPredicted RBP10.2□□□□□ -0.78
KARS-207ENST00000566560 MGAT4BQ9UQ53 548 aa10.2□□□□□ -0.78
KARS-207ENST00000566560 HIF3AQ9Y2N7 669 aa10.2□□□□□ -0.78
KARS-207ENST00000566560 FLVCR1Q9Y5Y0 555 aa10.2□□□□□ -0.78
KARS-207ENST00000566560 UBR5O95071 2799 aaPredicted RBP10.2□□□□□ -0.78
KARS-207ENST00000566560 USP9XQ93008 2570 aaPredicted RBP10.2□□□□□ -0.78
KARS-207ENST00000566560 DOPEY1Q5JWR5 2465 aa10.19□□□□□ -0.78
KARS-207ENST00000566560 DVL2O14641 736 aa10.19□□□□□ -0.78
KARS-207ENST00000566560 TRAF3IP2O43734 574 aaPredicted RBP10.19□□□□□ -0.78
KARS-207ENST00000566560 AKAP8O43823 692 aaKnown RBP10.19□□□□□ -0.78
KARS-207ENST00000566560 ZG16O60844 167 aa10.19□□□□□ -0.78
KARS-207ENST00000566560 TNFSF13O75888 250 aa10.19□□□□□ -0.78
KARS-207ENST00000566560 AGFG2O95081 481 aa10.19□□□□□ -0.78
KARS-207ENST00000566560 BAG2O95816 211 aa10.19□□□□□ -0.78
KARS-207ENST00000566560 YES1P07947 543 aa10.19□□□□□ -0.78
KARS-207ENST00000566560 BMP5P22003 454 aa10.19□□□□□ -0.78
KARS-207ENST00000566560 CHRNB4P30926 498 aa10.19□□□□□ -0.78
KARS-207ENST00000566560 OPRM1P35372 400 aa10.19□□□□□ -0.78
KARS-207ENST00000566560 AQP2P41181 271 aa10.19□□□□□ -0.78
KARS-207ENST00000566560 GSSP48637 474 aa10.19□□□□□ -0.78
KARS-207ENST00000566560 PRPS1P60891 318 aa10.19□□□□□ -0.78
KARS-207ENST00000566560 ELF3P78545 371 aaPredicted RBP10.19□□□□□ -0.78
KARS-207ENST00000566560 TSPAN31Q12999 210 aa10.19□□□□□ -0.78
KARS-207ENST00000566560 TAF11Q15544 211 aa10.19□□□□□ -0.78
KARS-207ENST00000566560 ANKDD1AQ495B1 522 aa10.19□□□□□ -0.78
KARS-207ENST00000566560 ZBED5Q49AG3 693 aa10.19□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 65.2 ms