RNA–Protein interactions for RNA: ENST00000563400.1

VPS35P1-201, Transcript of VPS35, retromer complex component pseudogene 1, humanhuman

BASIC

Gene VPS35P1, Length 1,518 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS35P1-201ENST00000563400 NOL4O94818 638 aa4.54□□□□□ -1.68
VPS35P1-201ENST00000563400 NHLRC4P0CG21 123 aaPredicted RBP4.54□□□□□ -1.68
VPS35P1-201ENST00000563400 NPIPA8P0DM63 369 aa4.54□□□□□ -1.68
VPS35P1-201ENST00000563400 MYL2P10916 166 aa4.54□□□□□ -1.68
VPS35P1-201ENST00000563400 AOC1P19801 751 aa4.54□□□□□ -1.68
VPS35P1-201ENST00000563400 TEAD1P28347 426 aa4.54□□□□□ -1.68
VPS35P1-201ENST00000563400 ADORA2BP29275 332 aa4.54□□□□□ -1.68
VPS35P1-201ENST00000563400 SDC4P31431 198 aa4.54□□□□□ -1.68
VPS35P1-201ENST00000563400 RFX3P48380 749 aa4.54□□□□□ -1.68
VPS35P1-201ENST00000563400 UBE2MP61081 183 aaKnown RBP4.54□□□□□ -1.68
VPS35P1-201ENST00000563400 FOXE3Q13461 319 aa4.54□□□□□ -1.68
VPS35P1-201ENST00000563400 CASP8Q14790 479 aa4.54□□□□□ -1.68
VPS35P1-201ENST00000563400 TSC22D1Q15714 1073 aa4.54□□□□□ -1.68
VPS35P1-201ENST00000563400 TNXAQ16473 311 aa4.54□□□□□ -1.68
VPS35P1-201ENST00000563400 KLHL22Q53GT1 634 aa4.54□□□□□ -1.68
VPS35P1-201ENST00000563400 ACSM5Q6NUN0 579 aa4.54□□□□□ -1.68
VPS35P1-201ENST00000563400 ULK3Q6PHR2 472 aa4.54□□□□□ -1.68
VPS35P1-201ENST00000563400 Q6ZRG5 221 aa4.54□□□□□ -1.68
VPS35P1-201ENST00000563400 Q6ZSR3 168 aa4.54□□□□□ -1.68
VPS35P1-201ENST00000563400 FAM57BQ71RH2 274 aa4.54□□□□□ -1.68
VPS35P1-201ENST00000563400 ASCL5Q7RTU5 278 aa4.54□□□□□ -1.68
VPS35P1-201ENST00000563400 KMT5CQ86Y97 462 aa4.54□□□□□ -1.68
VPS35P1-201ENST00000563400 LINC01561Q8N1V8 128 aa4.54□□□□□ -1.68
VPS35P1-201ENST00000563400 SLC44A3Q8N4M1 653 aa4.54□□□□□ -1.68
VPS35P1-201ENST00000563400 SNX31Q8N9S9 440 aa4.54□□□□□ -1.68
VPS35P1-201ENST00000563400 OR4F17Q8NGA8 305 aa4.54□□□□□ -1.68
VPS35P1-201ENST00000563400 OR4F5Q8NH21 305 aa4.54□□□□□ -1.68
VPS35P1-201ENST00000563400 FAM131CQ96AQ9 280 aa4.54□□□□□ -1.68
VPS35P1-201ENST00000563400 MYEOVQ96EZ4 313 aa4.54□□□□□ -1.68
VPS35P1-201ENST00000563400 DUS3LQ96G46 650 aaKnown RBP4.54□□□□□ -1.68
VPS35P1-201ENST00000563400 C8orf49Q96NF6 230 aa4.54□□□□□ -1.68
VPS35P1-201ENST00000563400 PGLYRP2Q96PD5 576 aa4.54□□□□□ -1.68
VPS35P1-201ENST00000563400 CSPG4P5Q96PW8 444 aa4.54□□□□□ -1.68
VPS35P1-201ENST00000563400 OR4F4Q96R69 305 aa4.54□□□□□ -1.68
VPS35P1-201ENST00000563400 MRPL45Q9BRJ2 306 aaKnown RBP4.54□□□□□ -1.68
VPS35P1-201ENST00000563400 APOOQ9BUR5 198 aa4.54□□□□□ -1.68
VPS35P1-201ENST00000563400 GBA3Q9H227 469 aa4.54□□□□□ -1.68
VPS35P1-201ENST00000563400 THSD1Q9NS62 852 aa4.54□□□□□ -1.68
VPS35P1-201ENST00000563400 UVRAGQ9P2Y5 699 aa4.54□□□□□ -1.68
VPS35P1-201ENST00000563400 NPIPA1Q9UND3 350 aa4.54□□□□□ -1.68
VPS35P1-201ENST00000563400 LRRC42Q9Y546 428 aa4.54□□□□□ -1.68
VPS35P1-201ENST00000563400 LTBP2Q14767 1821 aa4.54□□□□□ -1.68
VPS35P1-201ENST00000563400 TRBV5-3A0A0A0MS03 114 aa4.53□□□□□ -1.68
VPS35P1-201ENST00000563400 NPIPA5A0A0B4J1W7 369 aa4.53□□□□□ -1.68
VPS35P1-201ENST00000563400 TRBV5-5A0A0J9YX44 114 aa4.53□□□□□ -1.68
VPS35P1-201ENST00000563400 MYBPHLA2RUH7 354 aa4.53□□□□□ -1.68
VPS35P1-201ENST00000563400 MGAT4DA6NG13 374 aa4.53□□□□□ -1.68
VPS35P1-201ENST00000563400 C15orf62A8K5M9 175 aa4.53□□□□□ -1.68
VPS35P1-201ENST00000563400 A8MVM7 634 aa4.53□□□□□ -1.68
VPS35P1-201ENST00000563400 NPIPA5E9PKD4 350 aa4.53□□□□□ -1.68
VPS35P1-201ENST00000563400 I3L4J1 428 aa4.53□□□□□ -1.68
VPS35P1-201ENST00000563400 CCL16O15467 120 aa4.53□□□□□ -1.68
VPS35P1-201ENST00000563400 CFLARO15519 480 aa4.53□□□□□ -1.68
VPS35P1-201ENST00000563400 TAPBPO15533 448 aa4.53□□□□□ -1.68
VPS35P1-201ENST00000563400 MBTPS2O43462 519 aa4.53□□□□□ -1.68
VPS35P1-201ENST00000563400 OR10H3O60404 316 aa4.53□□□□□ -1.68
VPS35P1-201ENST00000563400 SC5DO75845 299 aa4.53□□□□□ -1.68
VPS35P1-201ENST00000563400 TOXO94900 526 aa4.53□□□□□ -1.68
VPS35P1-201ENST00000563400 IFNW1P05000 195 aa4.53□□□□□ -1.68
VPS35P1-201ENST00000563400 EDN1P05305 212 aa4.53□□□□□ -1.68
VPS35P1-201ENST00000563400 TFAP2AP05549 437 aa4.53□□□□□ -1.68
VPS35P1-201ENST00000563400 SP1P08047 785 aa4.53□□□□□ -1.68
VPS35P1-201ENST00000563400 MBL2P11226 248 aaPredicted RBP4.53□□□□□ -1.68
VPS35P1-201ENST00000563400 IDSP22304 550 aa4.53□□□□□ -1.68
VPS35P1-201ENST00000563400 LMO2P25791 158 aa4.53□□□□□ -1.68
VPS35P1-201ENST00000563400 PDHA2P29803 388 aa4.53□□□□□ -1.68
VPS35P1-201ENST00000563400 RPL3P39023 403 aaKnown RBP4.53□□□□□ -1.68
VPS35P1-201ENST00000563400 SLC26A3P40879 764 aa4.53□□□□□ -1.68
VPS35P1-201ENST00000563400 AQP2P41181 271 aa4.53□□□□□ -1.68
VPS35P1-201ENST00000563400 SLC1A1P43005 524 aa4.53□□□□□ -1.68
VPS35P1-201ENST00000563400 UCNP55089 124 aa4.53□□□□□ -1.68
VPS35P1-201ENST00000563400 PKNOX1P55347 436 aa4.53□□□□□ -1.68
VPS35P1-201ENST00000563400 RAB10P61026 200 aa4.53□□□□□ -1.68
VPS35P1-201ENST00000563400 RPS18P62269 152 aaKnown RBP4.53□□□□□ -1.68
VPS35P1-201ENST00000563400 TRAM2Q15035 370 aa4.53□□□□□ -1.68
VPS35P1-201ENST00000563400 FAM189A2Q15884 450 aa4.53□□□□□ -1.68
VPS35P1-201ENST00000563400 C3AR1Q16581 482 aa4.53□□□□□ -1.68
VPS35P1-201ENST00000563400 GOLGA7BQ2TAP0 167 aa4.53□□□□□ -1.68
VPS35P1-201ENST00000563400 SNAI3Q3KNW1 292 aa4.53□□□□□ -1.68
VPS35P1-201ENST00000563400 SLC25A52Q3SY17 297 aa4.53□□□□□ -1.68
VPS35P1-201ENST00000563400 C5orf47Q569G3 176 aa4.53□□□□□ -1.68
VPS35P1-201ENST00000563400 MTX3Q5HYI7 312 aa4.53□□□□□ -1.68
VPS35P1-201ENST00000563400 BRMS1LQ5PSV4 323 aa4.53□□□□□ -1.68
VPS35P1-201ENST00000563400 FNDC7Q5VTL7 733 aa4.53□□□□□ -1.68
VPS35P1-201ENST00000563400 C22orf42Q6IC83 251 aa4.53□□□□□ -1.68
VPS35P1-201ENST00000563400 REEP3Q6NUK4 255 aa4.53□□□□□ -1.68
VPS35P1-201ENST00000563400 C3P1Q6ZMU1 363 aa4.53□□□□□ -1.68
VPS35P1-201ENST00000563400 Q6ZNX1 250 aa4.53□□□□□ -1.68
VPS35P1-201ENST00000563400 RFPL4BQ6ZWI9 263 aa4.53□□□□□ -1.68
VPS35P1-201ENST00000563400 PIGZQ86VD9 579 aa4.53□□□□□ -1.68
VPS35P1-201ENST00000563400 C17orf64Q86WR6 236 aa4.53□□□□□ -1.68
VPS35P1-201ENST00000563400 MARCH9Q86YJ5 346 aa4.53□□□□□ -1.68
VPS35P1-201ENST00000563400 ZNF100Q8IYN0 542 aa4.53□□□□□ -1.68
VPS35P1-201ENST00000563400 TRAM1L1Q8N609 369 aa4.53□□□□□ -1.68
VPS35P1-201ENST00000563400 ARFGAP1Q8N6T3 406 aa4.53□□□□□ -1.68
VPS35P1-201ENST00000563400 TMEM163Q8TC26 289 aa4.53□□□□□ -1.68
VPS35P1-201ENST00000563400 ART4Q93070 314 aa4.53□□□□□ -1.68
VPS35P1-201ENST00000563400 MRPL24Q96A35 216 aaKnown RBP4.53□□□□□ -1.68
VPS35P1-201ENST00000563400 ECHDC3Q96DC8 303 aa4.53□□□□□ -1.68
VPS35P1-201ENST00000563400 BBC3Q96PG8 261 aaPredicted RBP4.53□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms