RNA–Protein interactions for RNA: ENST00000560005.6

PSEN1-225, Transcript of presenilin 1, humanhuman

TSL 3

Gene PSEN1, Length 699 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-225ENST00000560005 SLC30A6Q6NXT4 461 aa18.3■□□□□ 0.52
PSEN1-225ENST00000560005 CD300LDQ6UXZ3 194 aa18.3■□□□□ 0.52
PSEN1-225ENST00000560005 ZNF730Q6ZMV8 503 aa18.3■□□□□ 0.52
PSEN1-225ENST00000560005 P4HA3Q7Z4N8 544 aa18.3■□□□□ 0.52
PSEN1-225ENST00000560005 FAM71CQ8NEG0 241 aa18.3■□□□□ 0.52
PSEN1-225ENST00000560005 PIGXQ8TBF5 258 aa18.3■□□□□ 0.52
PSEN1-225ENST00000560005 DNAJA4Q8WW22 397 aaPredicted RBP18.3■□□□□ 0.52
PSEN1-225ENST00000560005 CNBD2Q96M20 576 aa18.3■□□□□ 0.52
PSEN1-225ENST00000560005 NODALQ96S42 347 aa18.3■□□□□ 0.52
PSEN1-225ENST00000560005 CXorf56Q9H5V9 222 aa18.3■□□□□ 0.52
PSEN1-225ENST00000560005 HSPE1-MOB4S4R3N1 261 aa18.3■□□□□ 0.52
PSEN1-225ENST00000560005 LOC100130705A0A1B0GUX0 176 aa18.29■□□□□ 0.52
PSEN1-225ENST00000560005 RNF223E7ERA6 249 aa18.29■□□□□ 0.52
PSEN1-225ENST00000560005 NDUFB5O43674 189 aa18.29■□□□□ 0.52
PSEN1-225ENST00000560005 RPSAP08865 295 aaKnown RBP18.29■□□□□ 0.52
PSEN1-225ENST00000560005 LINGO3P0C6S8 592 aa18.29■□□□□ 0.52
PSEN1-225ENST00000560005 UBTFL6P0CB48 400 aaPredicted RBP18.29■□□□□ 0.52
PSEN1-225ENST00000560005 GKN3PP0CG01 181 aa18.29■□□□□ 0.52
PSEN1-225ENST00000560005 ACAA2P42765 397 aaKnown RBP18.29■□□□□ 0.52
PSEN1-225ENST00000560005 NPRL3Q12980 569 aa18.29■□□□□ 0.52
PSEN1-225ENST00000560005 LAPTM4AQ15012 233 aa18.29■□□□□ 0.52
PSEN1-225ENST00000560005 ULK3Q6PHR2 472 aa18.29■□□□□ 0.52
PSEN1-225ENST00000560005 C22orf34Q6ZV56 151 aa18.29■□□□□ 0.52
PSEN1-225ENST00000560005 USP51Q70EK9 711 aa18.29■□□□□ 0.52
PSEN1-225ENST00000560005 BTLAQ7Z6A9 289 aa18.29■□□□□ 0.52
PSEN1-225ENST00000560005 WDSUB1Q8N9V3 476 aa18.29■□□□□ 0.52
PSEN1-225ENST00000560005 AQP11Q8NBQ7 271 aa18.29■□□□□ 0.52
PSEN1-225ENST00000560005 OR4K5Q8NGD3 323 aa18.29■□□□□ 0.52
PSEN1-225ENST00000560005 GNPDA2Q8TDQ7 276 aa18.29■□□□□ 0.52
PSEN1-225ENST00000560005 HGDQ93099 445 aa18.29■□□□□ 0.52
PSEN1-225ENST00000560005 APOL4Q9BPW4 351 aa18.29■□□□□ 0.52
PSEN1-225ENST00000560005 GABARAPL3Q9BY60 117 aa18.29■□□□□ 0.52
PSEN1-225ENST00000560005 YTHDF1Q9BYJ9 559 aaKnown RBP18.29■□□□□ 0.52
PSEN1-225ENST00000560005 SDHAF3Q9NRP4 125 aa18.29■□□□□ 0.52
PSEN1-225ENST00000560005 MAN2C1Q9NTJ4 1040 aa18.29■□□□□ 0.52
PSEN1-225ENST00000560005 TAS2R10Q9NYW0 307 aa18.29■□□□□ 0.52
PSEN1-225ENST00000560005 KLRF1Q9NZS2 232 aa18.29■□□□□ 0.52
PSEN1-225ENST00000560005 C16orf97H3BN30 126 aa18.28■□□□□ 0.52
PSEN1-225ENST00000560005 HCRTR2O43614 444 aa18.28■□□□□ 0.52
PSEN1-225ENST00000560005 FADS1O60427 444 aa18.28■□□□□ 0.52
PSEN1-225ENST00000560005 CBR3O75828 277 aa18.28■□□□□ 0.52
PSEN1-225ENST00000560005 CRHP06850 196 aa18.28■□□□□ 0.52
PSEN1-225ENST00000560005 RBM34P42696 430 aaKnown RBP18.28■□□□□ 0.52
PSEN1-225ENST00000560005 CHN2P52757 468 aa18.28■□□□□ 0.52
PSEN1-225ENST00000560005 TPD52P55327 224 aaPredicted RBP18.28■□□□□ 0.52
PSEN1-225ENST00000560005 CLDN18P56856 261 aa18.28■□□□□ 0.52
PSEN1-225ENST00000560005 ANKRD34AQ69YU3 496 aa18.28■□□□□ 0.52
PSEN1-225ENST00000560005 C1orf94Q6P1W5 598 aa18.28■□□□□ 0.52
PSEN1-225ENST00000560005 TMEM81Q6P7N7 255 aa18.28■□□□□ 0.52
PSEN1-225ENST00000560005 CDK20Q8IZL9 346 aa18.28■□□□□ 0.52
PSEN1-225ENST00000560005 C8orf59Q8N0T1 100 aaPredicted RBP18.28■□□□□ 0.52
PSEN1-225ENST00000560005 GRIP2Q9C0E4 1043 aa18.28■□□□□ 0.52
PSEN1-225ENST00000560005 RIBC2Q9H4K1 309 aa18.28■□□□□ 0.52
PSEN1-225ENST00000560005 ELOVL5Q9NYP7 299 aa18.28■□□□□ 0.52
PSEN1-225ENST00000560005 TMEM5Q9Y2B1 443 aa18.28■□□□□ 0.52
PSEN1-225ENST00000560005 CHP2O43745 196 aa18.27■□□□□ 0.52
PSEN1-225ENST00000560005 GASTP01350 101 aa18.27■□□□□ 0.52
PSEN1-225ENST00000560005 ZNF708P17019 499 aa18.27■□□□□ 0.52
PSEN1-225ENST00000560005 EVI2BP34910 448 aa18.27■□□□□ 0.52
PSEN1-225ENST00000560005 SIRPAP78324 504 aa18.27■□□□□ 0.52
PSEN1-225ENST00000560005 HOXC5Q00444 222 aa18.27■□□□□ 0.52
PSEN1-225ENST00000560005 WBP2NLQ6ICG8 309 aa18.27■□□□□ 0.52
PSEN1-225ENST00000560005 OR2A2Q6IF42 318 aa18.27■□□□□ 0.52
PSEN1-225ENST00000560005 MBOAT2Q6ZWT7 520 aa18.27■□□□□ 0.52
PSEN1-225ENST00000560005 GALNT5Q7Z7M9 940 aa18.27■□□□□ 0.52
PSEN1-225ENST00000560005 OR9Q2Q8NGE9 314 aa18.27■□□□□ 0.52
PSEN1-225ENST00000560005 SFXN2Q96NB2 322 aa18.27■□□□□ 0.52
PSEN1-225ENST00000560005 MBOAT4Q96T53 435 aa18.27■□□□□ 0.52
PSEN1-225ENST00000560005 SLC7A7Q9UM01 511 aa18.27■□□□□ 0.52
PSEN1-225ENST00000560005 A0A087WUU8 490 aa18.26■□□□□ 0.51
PSEN1-225ENST00000560005 A0A0B4J2E0 115 aa18.26■□□□□ 0.51
PSEN1-225ENST00000560005 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP18.26■□□□□ 0.51
PSEN1-225ENST00000560005 A0A1B0GX12 115 aa18.26■□□□□ 0.51
PSEN1-225ENST00000560005 SLC22A20A6NK97 555 aa18.26■□□□□ 0.51
PSEN1-225ENST00000560005 TNFAIP8O95379 198 aa18.26■□□□□ 0.51
PSEN1-225ENST00000560005 TP53P04637 393 aaPredicted RBP18.26■□□□□ 0.51
PSEN1-225ENST00000560005 PNMTP11086 282 aa18.26■□□□□ 0.51
PSEN1-225ENST00000560005 PRG2P13727 222 aa18.26■□□□□ 0.51
PSEN1-225ENST00000560005 TCEA1P23193 301 aaKnown RBP18.26■□□□□ 0.51
PSEN1-225ENST00000560005 HTR2AP28223 471 aa18.26■□□□□ 0.51
PSEN1-225ENST00000560005 RYKP34925 604 aa18.26■□□□□ 0.51
PSEN1-225ENST00000560005 KIR2DL2P43627 348 aaPredicted RBP18.26■□□□□ 0.51
PSEN1-225ENST00000560005 C17orf67Q0P5P2 114 aa18.26■□□□□ 0.51
PSEN1-225ENST00000560005 SNTA1Q13424 505 aa18.26■□□□□ 0.51
PSEN1-225ENST00000560005 SEC23BQ15437 767 aa18.26■□□□□ 0.51
PSEN1-225ENST00000560005 CLEC12BQ2HXU8 276 aa18.26■□□□□ 0.51
PSEN1-225ENST00000560005 PGBD2Q6P3X8 592 aa18.26■□□□□ 0.51
PSEN1-225ENST00000560005 ZNF704Q6ZNC4 412 aaPredicted RBP18.26■□□□□ 0.51
PSEN1-225ENST00000560005 THAP5Q7Z6K1 395 aa18.26■□□□□ 0.51
PSEN1-225ENST00000560005 TSPYL5Q86VY4 417 aaPredicted RBP18.26■□□□□ 0.51
PSEN1-225ENST00000560005 C12orf10Q9HB07 376 aa18.26■□□□□ 0.51
PSEN1-225ENST00000560005 CTPS2Q9NRF8 586 aa18.26■□□□□ 0.51
PSEN1-225ENST00000560005 MITFO75030 526 aaPredicted RBP18.25■□□□□ 0.51
PSEN1-225ENST00000560005 ANGPTL1O95841 491 aa18.25■□□□□ 0.51
PSEN1-225ENST00000560005 OSMP13725 252 aa18.25■□□□□ 0.51
PSEN1-225ENST00000560005 PGCP20142 388 aa18.25■□□□□ 0.51
PSEN1-225ENST00000560005 SUMO3P55854 103 aaPredicted RBP18.25■□□□□ 0.51
PSEN1-225ENST00000560005 SKP2Q13309 424 aa18.25■□□□□ 0.51
PSEN1-225ENST00000560005 UGT2A3Q6UWM9 527 aa18.25■□□□□ 0.51
PSEN1-225ENST00000560005 CHMP1BQ7LBR1 199 aa18.25■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms