RNA–Protein interactions for RNA: ENST00000558763.1

SMAD3-207, Transcript of SMAD family member 3, humanhuman

TSL 2

Gene SMAD3, Length 1,957 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-207ENST00000558763 ASB6Q9NWX5 421 aa11.69□□□□□ -0.54
SMAD3-207ENST00000558763 KLRF1Q9NZS2 232 aa11.69□□□□□ -0.54
SMAD3-207ENST00000558763 STUB1Q9UNE7 303 aa11.69□□□□□ -0.54
SMAD3-207ENST00000558763 CAB39Q9Y376 341 aaPredicted RBP11.69□□□□□ -0.54
SMAD3-207ENST00000558763 NKX2-8O15522 239 aa11.68□□□□□ -0.54
SMAD3-207ENST00000558763 EFNA2O43921 213 aa11.68□□□□□ -0.54
SMAD3-207ENST00000558763 MT-ATP6P00846 226 aa11.68□□□□□ -0.54
SMAD3-207ENST00000558763 CTXN1P60606 82 aa11.68□□□□□ -0.54
SMAD3-207ENST00000558763 RPS7P62081 194 aaKnown RBP11.68□□□□□ -0.54
SMAD3-207ENST00000558763 Q0VFX4 171 aa11.68□□□□□ -0.54
SMAD3-207ENST00000558763 FOXF1Q12946 379 aa11.68□□□□□ -0.54
SMAD3-207ENST00000558763 GALEQ14376 348 aa11.68□□□□□ -0.54
SMAD3-207ENST00000558763 SGCBQ16585 318 aa11.68□□□□□ -0.54
SMAD3-207ENST00000558763 SLC25A53Q5H9E4 307 aa11.68□□□□□ -0.54
SMAD3-207ENST00000558763 TMEM81Q6P7N7 255 aa11.68□□□□□ -0.54
SMAD3-207ENST00000558763 GDPGP1Q6ZNW5 385 aa11.68□□□□□ -0.54
SMAD3-207ENST00000558763 SSX6Q7RTT6 188 aa11.68□□□□□ -0.54
SMAD3-207ENST00000558763 MFSD4AQ8N468 514 aa11.68□□□□□ -0.54
SMAD3-207ENST00000558763 ZFP41Q8N8Y5 198 aa11.68□□□□□ -0.54
SMAD3-207ENST00000558763 KBTBD8Q8NFY9 601 aa11.68□□□□□ -0.54
SMAD3-207ENST00000558763 OR51L1Q8NGJ5 315 aa11.68□□□□□ -0.54
SMAD3-207ENST00000558763 OR6Q1Q8NGQ2 317 aa11.68□□□□□ -0.54
SMAD3-207ENST00000558763 POC1BQ8TC44 478 aa11.68□□□□□ -0.54
SMAD3-207ENST00000558763 ZMYND19Q96E35 227 aaPredicted RBP11.68□□□□□ -0.54
SMAD3-207ENST00000558763 DCLRE1CQ96SD1 692 aaKnown RBP11.68□□□□□ -0.54
SMAD3-207ENST00000558763 CCDC86Q9H6F5 360 aaKnown RBP11.68□□□□□ -0.54
SMAD3-207ENST00000558763 CCDC59Q9P031 241 aaKnown RBP11.68□□□□□ -0.54
SMAD3-207ENST00000558763 SLC6A5Q9Y345 797 aa11.68□□□□□ -0.54
SMAD3-207ENST00000558763 CHD8Q9HCK8 2581 aa11.68□□□□□ -0.54
SMAD3-207ENST00000558763 PNMA8CA0A1B0GUJ8 204 aa11.68□□□□□ -0.54
SMAD3-207ENST00000558763 FZD7O75084 574 aa11.68□□□□□ -0.54
SMAD3-207ENST00000558763 IL11P20809 199 aa11.68□□□□□ -0.54
SMAD3-207ENST00000558763 PSMA1P25786 263 aaKnown RBP11.68□□□□□ -0.54
SMAD3-207ENST00000558763 IDUAP35475 653 aa11.68□□□□□ -0.54
SMAD3-207ENST00000558763 ATP6V1E1P36543 226 aa11.68□□□□□ -0.54
SMAD3-207ENST00000558763 HTR3AP46098 478 aa11.68□□□□□ -0.54
SMAD3-207ENST00000558763 DIO1P49895 249 aa11.68□□□□□ -0.54
SMAD3-207ENST00000558763 PLPPR5Q32ZL2 321 aa11.68□□□□□ -0.54
SMAD3-207ENST00000558763 LYPD4Q6UWN0 246 aa11.68□□□□□ -0.54
SMAD3-207ENST00000558763 GHDCQ8N2G8 530 aa11.68□□□□□ -0.54
SMAD3-207ENST00000558763 ARIH2OSQ8N7S6 290 aa11.68□□□□□ -0.54
SMAD3-207ENST00000558763 FADS6Q8N9I5 356 aa11.68□□□□□ -0.54
SMAD3-207ENST00000558763 WDSUB1Q8N9V3 476 aa11.68□□□□□ -0.54
SMAD3-207ENST00000558763 OR2M3Q8NG83 312 aa11.68□□□□□ -0.54
SMAD3-207ENST00000558763 OR10H4Q8NGA5 316 aa11.68□□□□□ -0.54
SMAD3-207ENST00000558763 SNIP1Q8TAD8 396 aaKnown RBP11.68□□□□□ -0.54
SMAD3-207ENST00000558763 TMEM234Q8WY98 164 aa11.68□□□□□ -0.54
SMAD3-207ENST00000558763 SMPDL3BQ92485 455 aa11.68□□□□□ -0.54
SMAD3-207ENST00000558763 TBX5Q99593 518 aa11.68□□□□□ -0.54
SMAD3-207ENST00000558763 PROK2Q9HC23 129 aa11.68□□□□□ -0.54
SMAD3-207ENST00000558763 CPNE5Q9HCH3 593 aa11.68□□□□□ -0.54
SMAD3-207ENST00000558763 INPP5EQ9NRR6 644 aa11.68□□□□□ -0.54
SMAD3-207ENST00000558763 FBXL2Q9UKC9 423 aa11.68□□□□□ -0.54
SMAD3-207ENST00000558763 VDAC3Q9Y277 283 aa11.68□□□□□ -0.54
SMAD3-207ENST00000558763 SIRT4Q9Y6E7 314 aaPredicted RBP11.68□□□□□ -0.54
SMAD3-207ENST00000558763 A0A1W2PQL4 384 aaPredicted RBP11.67□□□□□ -0.54
SMAD3-207ENST00000558763 SHISA8B8ZZ34 492 aa11.67□□□□□ -0.54
SMAD3-207ENST00000558763 ZNF670-ZNF695F2Z2N8 137 aa11.67□□□□□ -0.54
SMAD3-207ENST00000558763 DCTN6O00399 190 aa11.67□□□□□ -0.54
SMAD3-207ENST00000558763 HPP00738 406 aa11.67□□□□□ -0.54
SMAD3-207ENST00000558763 GRPRP30550 384 aa11.67□□□□□ -0.54
SMAD3-207ENST00000558763 GABRA5P31644 462 aa11.67□□□□□ -0.54
SMAD3-207ENST00000558763 SERPINB10P48595 397 aa11.67□□□□□ -0.54
SMAD3-207ENST00000558763 SLC25A1P53007 311 aa11.67□□□□□ -0.54
SMAD3-207ENST00000558763 SLC16A1P53985 500 aa11.67□□□□□ -0.54
SMAD3-207ENST00000558763 ZNF829Q3KNS6 432 aaPredicted RBP11.67□□□□□ -0.54
SMAD3-207ENST00000558763 LEG1Q6P5S2 330 aa11.67□□□□□ -0.54
SMAD3-207ENST00000558763 MAMDC2Q7Z304 686 aaPredicted RBP11.67□□□□□ -0.54
SMAD3-207ENST00000558763 OR5J2Q8NH18 312 aa11.67□□□□□ -0.54
SMAD3-207ENST00000558763 ARL5BQ96KC2 179 aa11.67□□□□□ -0.54
SMAD3-207ENST00000558763 DCBLD2Q96PD2 775 aa11.67□□□□□ -0.54
SMAD3-207ENST00000558763 TSSK2Q96PF2 358 aa11.67□□□□□ -0.54
SMAD3-207ENST00000558763 TM9SF2Q99805 663 aa11.67□□□□□ -0.54
SMAD3-207ENST00000558763 METTL7AQ9H8H3 244 aa11.67□□□□□ -0.54
SMAD3-207ENST00000558763 TXNL4BQ9NX01 149 aaKnown RBP11.67□□□□□ -0.54
SMAD3-207ENST00000558763 PPP4R1LQ9P1A2 415 aa11.67□□□□□ -0.54
SMAD3-207ENST00000558763 MED19A0JLT2 244 aaPredicted RBP11.67□□□□□ -0.54
SMAD3-207ENST00000558763 AKAP8O43823 692 aaKnown RBP11.67□□□□□ -0.54
SMAD3-207ENST00000558763 SLC25A12O75746 678 aa11.67□□□□□ -0.54
SMAD3-207ENST00000558763 MSX1P28360 303 aa11.67□□□□□ -0.54
SMAD3-207ENST00000558763 APOBEC1P41238 236 aaKnown RBP11.67□□□□□ -0.54
SMAD3-207ENST00000558763 MLF1P58340 268 aa11.67□□□□□ -0.54
SMAD3-207ENST00000558763 BDH1Q02338 343 aa11.67□□□□□ -0.54
SMAD3-207ENST00000558763 POU4F2Q12837 409 aa11.67□□□□□ -0.54
SMAD3-207ENST00000558763 KRR1Q13601 381 aaKnown RBP11.67□□□□□ -0.54
SMAD3-207ENST00000558763 ZNF800Q2TB10 664 aaPredicted RBP eCLIP11.67□□□□□ -0.54
SMAD3-207ENST00000558763 EMC4Q5J8M3 183 aa11.67□□□□□ -0.54
SMAD3-207ENST00000558763 SLC35D3Q5M8T2 416 aa11.67□□□□□ -0.54
SMAD3-207ENST00000558763 SLC6A19Q695T7 634 aa11.67□□□□□ -0.54
SMAD3-207ENST00000558763 C5orf46Q6UWT4 87 aa11.67□□□□□ -0.54
SMAD3-207ENST00000558763 BTLAQ7Z6A9 289 aa11.67□□□□□ -0.54
SMAD3-207ENST00000558763 ADCK1Q86TW2 530 aa11.67□□□□□ -0.54
SMAD3-207ENST00000558763 KLBQ86Z14 1044 aa11.67□□□□□ -0.54
SMAD3-207ENST00000558763 OR6S1Q8NH40 331 aa11.67□□□□□ -0.54
SMAD3-207ENST00000558763 UFD1Q92890 307 aa11.67□□□□□ -0.54
SMAD3-207ENST00000558763 TMEM203Q969S6 136 aa11.67□□□□□ -0.54
SMAD3-207ENST00000558763 PLGRKTQ9HBL7 147 aa11.67□□□□□ -0.54
SMAD3-207ENST00000558763 ZNF346Q9UL40 294 aaKnown RBP11.67□□□□□ -0.54
SMAD3-207ENST00000558763 A3GALT2U3KPV4 340 aa11.67□□□□□ -0.54
SMAD3-207ENST00000558763 ACACAQ13085 2346 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 62.6 ms