RNA–Protein interactions for RNA: ENST00000558190.5

ATXN3-248, Transcript of ataxin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATXN3, Length 26,812 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-248ENST00000558190 TPRG1Q6ZUI0 275 aa3.43□□□□□ -1.86
ATXN3-248ENST00000558190 CLEC14AQ86T13 490 aa3.43□□□□□ -1.86
ATXN3-248ENST00000558190 RNF180Q86T96 592 aa3.43□□□□□ -1.86
ATXN3-248ENST00000558190 KLHDC1Q8N7A1 406 aa3.43□□□□□ -1.86
ATXN3-248ENST00000558190 ZFP62Q8NB50 900 aaPredicted RBP3.43□□□□□ -1.86
ATXN3-248ENST00000558190 LHX4Q969G2 390 aa3.43□□□□□ -1.86
ATXN3-248ENST00000558190 ADIPOR1Q96A54 375 aa3.43□□□□□ -1.86
ATXN3-248ENST00000558190 WASHC3Q9Y3C0 194 aa3.43□□□□□ -1.86
ATXN3-248ENST00000558190 HECW1Q76N89 1606 aa3.43□□□□□ -1.86
ATXN3-248ENST00000558190 IGLON5A6NGN9 336 aa3.43□□□□□ -1.86
ATXN3-248ENST00000558190 METTL15P1P0C7V9 234 aa3.43□□□□□ -1.86
ATXN3-248ENST00000558190 NPPBP16860 134 aa3.43□□□□□ -1.86
ATXN3-248ENST00000558190 SLC35A2P78381 396 aa3.43□□□□□ -1.86
ATXN3-248ENST00000558190 IAH1Q2TAA2 248 aaPredicted RBP3.43□□□□□ -1.86
ATXN3-248ENST00000558190 TOR2AQ5JU69 321 aa3.43□□□□□ -1.86
ATXN3-248ENST00000558190 MAMDC2Q7Z304 686 aaPredicted RBP3.43□□□□□ -1.86
ATXN3-248ENST00000558190 KCNG3Q8TAE7 436 aa3.43□□□□□ -1.86
ATXN3-248ENST00000558190 CYB5D2Q8WUJ1 264 aa3.43□□□□□ -1.86
ATXN3-248ENST00000558190 BLNKQ8WV28 456 aa3.43□□□□□ -1.86
ATXN3-248ENST00000558190 DGAT2Q96PD7 388 aa3.43□□□□□ -1.86
ATXN3-248ENST00000558190 ACPTQ9BZG2 426 aa3.43□□□□□ -1.86
ATXN3-248ENST00000558190 HOXA2O43364 376 aa3.42□□□□□ -1.86
ATXN3-248ENST00000558190 CHRNA7P36544 502 aa3.42□□□□□ -1.86
ATXN3-248ENST00000558190 HLA-DRB5Q30154 266 aa3.42□□□□□ -1.86
ATXN3-248ENST00000558190 PIANPQ8IYJ0 282 aa3.42□□□□□ -1.86
ATXN3-248ENST00000558190 ZNF514Q96K75 400 aaPredicted RBP3.42□□□□□ -1.86
ATXN3-248ENST00000558190 BOCQ9BWV1 1114 aa3.42□□□□□ -1.86
ATXN3-248ENST00000558190 FITM1A5D6W6 292 aa3.42□□□□□ -1.86
ATXN3-248ENST00000558190 EPXP11678 715 aa3.42□□□□□ -1.86
ATXN3-248ENST00000558190 SCGB2A2Q13296 93 aa3.42□□□□□ -1.86
ATXN3-248ENST00000558190 GUK1Q16774 197 aa3.42□□□□□ -1.86
ATXN3-248ENST00000558190 DACT2Q5SW24 774 aa3.42□□□□□ -1.86
ATXN3-248ENST00000558190 TMEM244Q5VVB8 128 aa3.42□□□□□ -1.86
ATXN3-248ENST00000558190 SCD5Q86SK9 330 aa3.42□□□□□ -1.86
ATXN3-248ENST00000558190 APOBEC3FQ8IUX4 373 aaKnown RBP3.42□□□□□ -1.86
ATXN3-248ENST00000558190 BPIFA2Q96DR5 249 aa3.42□□□□□ -1.86
ATXN3-248ENST00000558190 SPTA1P02549 2419 aa3.42□□□□□ -1.86
ATXN3-248ENST00000558190 ZNF140P52738 457 aaPredicted RBP3.42□□□□□ -1.86
ATXN3-248ENST00000558190 REC114Q7Z4M0 266 aa3.42□□□□□ -1.86
ATXN3-248ENST00000558190 PTRH1Q86Y79 214 aaKnown RBP3.42□□□□□ -1.86
ATXN3-248ENST00000558190 LANCL2Q9NS86 450 aa3.42□□□□□ -1.86
ATXN3-248ENST00000558190 SMIM35A0A1B0GVV1 85 aa3.42□□□□□ -1.86
ATXN3-248ENST00000558190 H0Y8G0 127 aa3.42□□□□□ -1.86
ATXN3-248ENST00000558190 SIM1P81133 766 aaPredicted RBP3.42□□□□□ -1.86
ATXN3-248ENST00000558190 TBL1XR1Q9BZK7 514 aa3.42□□□□□ -1.86
ATXN3-248ENST00000558190 HRASLS2Q9NWW9 162 aa3.42□□□□□ -1.86
ATXN3-248ENST00000558190 TMEM200CA6NKL6 621 aa3.42□□□□□ -1.86
ATXN3-248ENST00000558190 GPRIN2O60269 458 aa3.42□□□□□ -1.86
ATXN3-248ENST00000558190 ZNF728P0DKX0 622 aa3.42□□□□□ -1.86
ATXN3-248ENST00000558190 HTR2CP28335 458 aa3.42□□□□□ -1.86
ATXN3-248ENST00000558190 TAS2R20P59543 309 aa3.42□□□□□ -1.86
ATXN3-248ENST00000558190 LTBQ06643 244 aa3.42□□□□□ -1.86
ATXN3-248ENST00000558190 SEMA3BQ13214 749 aa3.42□□□□□ -1.86
ATXN3-248ENST00000558190 MINDY4Q4G0A6 757 aa3.42□□□□□ -1.86
ATXN3-248ENST00000558190 TFAP2EQ6VUC0 442 aa3.42□□□□□ -1.86
ATXN3-248ENST00000558190 CMTM1Q8IZ96 169 aa3.42□□□□□ -1.86
ATXN3-248ENST00000558190 PRELID3BQ9Y3B1 194 aa3.42□□□□□ -1.86
ATXN3-248ENST00000558190 CCDC187A0A096LP49 1063 aa3.42□□□□□ -1.86
ATXN3-248ENST00000558190 A0A1W2PPQ1 181 aa3.42□□□□□ -1.86
ATXN3-248ENST00000558190 SCNN1AP37088 669 aa3.42□□□□□ -1.86
ATXN3-248ENST00000558190 UBE2NLQ5JXB2 153 aa3.42□□□□□ -1.86
ATXN3-248ENST00000558190 ADAMTS13Q76LX8 1427 aa3.42□□□□□ -1.86
ATXN3-248ENST00000558190 CCL15-CCL14A0A0B4J2E2 113 aa3.42□□□□□ -1.86
ATXN3-248ENST00000558190 MGMTP16455 207 aa3.42□□□□□ -1.86
ATXN3-248ENST00000558190 CCL15Q16663 113 aa3.42□□□□□ -1.86
ATXN3-248ENST00000558190 ITPRIPL2Q3MIP1 535 aa3.42□□□□□ -1.86
ATXN3-248ENST00000558190 MZB1Q8WU39 189 aa3.42□□□□□ -1.86
ATXN3-248ENST00000558190 ARV1Q9H2C2 271 aa3.42□□□□□ -1.86
ATXN3-248ENST00000558190 ADARB2Q9NS39 739 aaKnown RBP3.42□□□□□ -1.86
ATXN3-248ENST00000558190 SLC35A3Q9Y2D2 325 aa3.42□□□□□ -1.86
ATXN3-248ENST00000558190 CSAG2Q9Y5P2 127 aa3.42□□□□□ -1.86
ATXN3-248ENST00000558190 FLVCR1Q9Y5Y0 555 aa3.42□□□□□ -1.86
ATXN3-248ENST00000558190 PLRG1O43660 514 aaKnown RBP3.42□□□□□ -1.86
ATXN3-248ENST00000558190 SLC2A10O95528 541 aa3.42□□□□□ -1.86
ATXN3-248ENST00000558190 ZNF763Q0D2J5 394 aa3.42□□□□□ -1.86
ATXN3-248ENST00000558190 INPP5JQ15735 1006 aaPredicted RBP3.42□□□□□ -1.86
ATXN3-248ENST00000558190 BCL2A1Q16548 175 aa3.42□□□□□ -1.86
ATXN3-248ENST00000558190 Q6ZN92 141 aa3.42□□□□□ -1.86
ATXN3-248ENST00000558190 CTU1Q7Z7A3 348 aaKnown RBP3.42□□□□□ -1.86
ATXN3-248ENST00000558190 PCYT2Q99447 389 aa3.42□□□□□ -1.86
ATXN3-248ENST00000558190 ELF5Q9UKW6 265 aaPredicted RBP3.42□□□□□ -1.86
ATXN3-248ENST00000558190 DEGS1O15121 323 aa3.42□□□□□ -1.86
ATXN3-248ENST00000558190 ST8SIA5O15466 376 aa3.42□□□□□ -1.86
ATXN3-248ENST00000558190 HLA-HP01893 362 aa3.42□□□□□ -1.86
ATXN3-248ENST00000558190 HLA-DOBP13765 273 aa3.42□□□□□ -1.86
ATXN3-248ENST00000558190 GNG10P50151 68 aa3.42□□□□□ -1.86
ATXN3-248ENST00000558190 SNRPNP63162 240 aaKnown RBP3.42□□□□□ -1.86
ATXN3-248ENST00000558190 CLN3Q13286 438 aa3.42□□□□□ -1.86
ATXN3-248ENST00000558190 IRF3Q14653 427 aa3.42□□□□□ -1.86
ATXN3-248ENST00000558190 TRAPPC6BQ86SZ2 158 aa3.42□□□□□ -1.86
ATXN3-248ENST00000558190 C12orf40Q86WS4 652 aa3.42□□□□□ -1.86
ATXN3-248ENST00000558190 RNF175Q8N4F7 328 aa3.42□□□□□ -1.86
ATXN3-248ENST00000558190 DEFB119Q8N690 84 aa3.42□□□□□ -1.86
ATXN3-248ENST00000558190 BANF2Q9H503 90 aa3.42□□□□□ -1.86
ATXN3-248ENST00000558190 IL20Q9NYY1 176 aa3.42□□□□□ -1.86
ATXN3-248ENST00000558190 COPS7AQ9UBW8 275 aa3.42□□□□□ -1.86
ATXN3-248ENST00000558190 OVOS2A0A0G2JMS6 1433 aa3.42□□□□□ -1.86
ATXN3-248ENST00000558190 PQLC2LA1A4F0 135 aa3.42□□□□□ -1.86
ATXN3-248ENST00000558190 CST4P01036 141 aa3.42□□□□□ -1.86
ATXN3-248ENST00000558190 SFTA3P0C7M3 94 aa3.42□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms