RNA–Protein interactions for RNA: ENST00000558117.1

RTF1-204, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 4

Gene RTF1, Length 552 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-204ENST00000558117 C14orf105Q9NVL8 296 aa4.79□□□□□ -1.64
RTF1-204ENST00000558117 STAP1Q9ULZ2 295 aa4.79□□□□□ -1.64
RTF1-204ENST00000558117 FREM3P0C091 2139 aa4.79□□□□□ -1.64
RTF1-204ENST00000558117 A0A0G2JMM0 328 aa4.78□□□□□ -1.64
RTF1-204ENST00000558117 A0A0J9YY10 115 aa4.78□□□□□ -1.64
RTF1-204ENST00000558117 A0A0J9YYE9 177 aa4.78□□□□□ -1.64
RTF1-204ENST00000558117 A0A1B0GU03 582 aa4.78□□□□□ -1.64
RTF1-204ENST00000558117 A0A1W2PPB8 328 aa4.78□□□□□ -1.64
RTF1-204ENST00000558117 A0A1W2PRS3 328 aa4.78□□□□□ -1.64
RTF1-204ENST00000558117 KIR3DP1A8MWS1 328 aa4.78□□□□□ -1.64
RTF1-204ENST00000558117 F8WDY8 70 aa4.78□□□□□ -1.64
RTF1-204ENST00000558117 HCN1O60741 890 aa4.78□□□□□ -1.64
RTF1-204ENST00000558117 FCGR3BO75015 233 aa4.78□□□□□ -1.64
RTF1-204ENST00000558117 CRCPO75575 148 aa4.78□□□□□ -1.64
RTF1-204ENST00000558117 CDC123O75794 336 aaPredicted RBP4.78□□□□□ -1.64
RTF1-204ENST00000558117 GLCEO94923 617 aa4.78□□□□□ -1.64
RTF1-204ENST00000558117 OR6B1O95007 311 aa4.78□□□□□ -1.64
RTF1-204ENST00000558117 AK1P00568 194 aa4.78□□□□□ -1.64
RTF1-204ENST00000558117 CD8AP01732 235 aa4.78□□□□□ -1.64
RTF1-204ENST00000558117 IGHV2-70P01814 119 aa4.78□□□□□ -1.64
RTF1-204ENST00000558117 TRBC1P01850 177 aa4.78□□□□□ -1.64
RTF1-204ENST00000558117 SERPING1P05155 500 aa4.78□□□□□ -1.64
RTF1-204ENST00000558117 PSMB4P28070 264 aa4.78□□□□□ -1.64
RTF1-204ENST00000558117 SOX6P35712 828 aa4.78□□□□□ -1.64
RTF1-204ENST00000558117 MNDAP41218 407 aa4.78□□□□□ -1.64
RTF1-204ENST00000558117 UBA52P62987 128 aaKnown RBP4.78□□□□□ -1.64
RTF1-204ENST00000558117 IRX1P78414 480 aaPredicted RBP4.78□□□□□ -1.64
RTF1-204ENST00000558117 PLGLB1Q02325 96 aa4.78□□□□□ -1.64
RTF1-204ENST00000558117 GBE1Q04446 702 aa4.78□□□□□ -1.64
RTF1-204ENST00000558117 SCGB2A2Q13296 93 aa4.78□□□□□ -1.64
RTF1-204ENST00000558117 PDE7AQ13946 482 aa4.78□□□□□ -1.64
RTF1-204ENST00000558117 EXT1Q16394 746 aa4.78□□□□□ -1.64
RTF1-204ENST00000558117 FASTKD1Q53R41 847 aaKnown RBP4.78□□□□□ -1.64
RTF1-204ENST00000558117 SLC25A53Q5H9E4 307 aa4.78□□□□□ -1.64
RTF1-204ENST00000558117 BEX5Q5H9J7 111 aa4.78□□□□□ -1.64
RTF1-204ENST00000558117 ADAMTSL4-AS1Q5T5F5 129 aa4.78□□□□□ -1.64
RTF1-204ENST00000558117 ARMC12Q5T9G4 340 aa4.78□□□□□ -1.64
RTF1-204ENST00000558117 KRTAP5-11Q6L8G4 156 aa4.78□□□□□ -1.64
RTF1-204ENST00000558117 MFSD12Q6NUT3 480 aa4.78□□□□□ -1.64
RTF1-204ENST00000558117 AFTPHQ6ULP2 937 aa4.78□□□□□ -1.64
RTF1-204ENST00000558117 ZNF497Q6ZNH5 498 aa4.78□□□□□ -1.64
RTF1-204ENST00000558117 ZNF550Q7Z398 422 aa4.78□□□□□ -1.64
RTF1-204ENST00000558117 TRAPPC5Q8IUR0 188 aa4.78□□□□□ -1.64
RTF1-204ENST00000558117 ZNF525Q8N782 197 aa4.78□□□□□ -1.64
RTF1-204ENST00000558117 SNX31Q8N9S9 440 aa4.78□□□□□ -1.64
RTF1-204ENST00000558117 OR2M7Q8NG81 312 aa4.78□□□□□ -1.64
RTF1-204ENST00000558117 MRGPRDQ8TDS7 321 aa4.78□□□□□ -1.64
RTF1-204ENST00000558117 FAF2Q96CS3 445 aa4.78□□□□□ -1.64
RTF1-204ENST00000558117 TUBGCP3Q96CW5 907 aa4.78□□□□□ -1.64
RTF1-204ENST00000558117 OTUB1Q96FW1 271 aaPredicted RBP4.78□□□□□ -1.64
RTF1-204ENST00000558117 GMPPAQ96IJ6 420 aaPredicted RBP4.78□□□□□ -1.64
RTF1-204ENST00000558117 NSMCE2Q96MF7 247 aa4.78□□□□□ -1.64
RTF1-204ENST00000558117 CCT8L2Q96SF2 557 aa4.78□□□□□ -1.64
RTF1-204ENST00000558117 SEPHS2Q99611 448 aa4.78□□□□□ -1.64
RTF1-204ENST00000558117 CPNE1Q99829 537 aa4.78□□□□□ -1.64
RTF1-204ENST00000558117 OPRPNQ99935 248 aaPredicted RBP4.78□□□□□ -1.64
RTF1-204ENST00000558117 URM1Q9BTM9 101 aaKnown RBP4.78□□□□□ -1.64
RTF1-204ENST00000558117 BLZF1Q9H2G9 400 aa4.78□□□□□ -1.64
RTF1-204ENST00000558117 RIBC2Q9H4K1 309 aa4.78□□□□□ -1.64
RTF1-204ENST00000558117 XKR8Q9H6D3 395 aa4.78□□□□□ -1.64
RTF1-204ENST00000558117 CENPMQ9NSP4 180 aa4.78□□□□□ -1.64
RTF1-204ENST00000558117 DNPEPQ9ULA0 475 aa4.78□□□□□ -1.64
RTF1-204ENST00000558117 COQ4Q9Y3A0 265 aa4.78□□□□□ -1.64
RTF1-204ENST00000558117 TMED3Q9Y3Q3 217 aa4.78□□□□□ -1.64
RTF1-204ENST00000558117 COLEC10Q9Y6Z7 277 aa4.78□□□□□ -1.64
RTF1-204ENST00000558117 PLXNB1O43157 2135 aa4.78□□□□□ -1.64
RTF1-204ENST00000558117 A0A087WW49 117 aa4.77□□□□□ -1.65
RTF1-204ENST00000558117 TRGV5A0A0B4J1U4 118 aa4.77□□□□□ -1.65
RTF1-204ENST00000558117 SLC5A10A0PJK1 596 aa4.77□□□□□ -1.65
RTF1-204ENST00000558117 MEIOCA2RUB1 952 aa4.77□□□□□ -1.65
RTF1-204ENST00000558117 FRG2CA6NGY1 282 aa4.77□□□□□ -1.65
RTF1-204ENST00000558117 ARHGEF33A8MVX0 844 aa4.77□□□□□ -1.65
RTF1-204ENST00000558117 TBX6O95947 436 aaPredicted RBP4.77□□□□□ -1.65
RTF1-204ENST00000558117 GZMAP12544 262 aa4.77□□□□□ -1.65
RTF1-204ENST00000558117 SKILP12757 684 aa4.77□□□□□ -1.65
RTF1-204ENST00000558117 KRT5P13647 590 aa4.77□□□□□ -1.65
RTF1-204ENST00000558117 TPSB2P20231 275 aa4.77□□□□□ -1.65
RTF1-204ENST00000558117 PTPN6P29350 595 aa4.77□□□□□ -1.65
RTF1-204ENST00000558117 CASQ1P31415 396 aa4.77□□□□□ -1.65
RTF1-204ENST00000558117 DEKP35659 375 aaKnown RBP4.77□□□□□ -1.65
RTF1-204ENST00000558117 IFT88Q13099 833 aa4.77□□□□□ -1.65
RTF1-204ENST00000558117 RFTN1Q14699 578 aaPredicted RBP4.77□□□□□ -1.65
RTF1-204ENST00000558117 SLC10A1Q14973 349 aa4.77□□□□□ -1.65
RTF1-204ENST00000558117 TPSAB1Q15661 275 aa4.77□□□□□ -1.65
RTF1-204ENST00000558117 NRF1Q16656 503 aa4.77□□□□□ -1.65
RTF1-204ENST00000558117 ODF4Q2M2E3 257 aa4.77□□□□□ -1.65
RTF1-204ENST00000558117 UGT3A2Q3SY77 523 aa4.77□□□□□ -1.65
RTF1-204ENST00000558117 TCTE1Q5JU00 501 aa4.77□□□□□ -1.65
RTF1-204ENST00000558117 DDX59Q5T1V6 619 aaKnown RBP eCLIP4.77□□□□□ -1.65
RTF1-204ENST00000558117 CASC10Q5T4H9 136 aa4.77□□□□□ -1.65
RTF1-204ENST00000558117 SASS6Q6UVJ0 657 aa4.77□□□□□ -1.65
RTF1-204ENST00000558117 PIGWQ7Z7B1 504 aa4.77□□□□□ -1.65
RTF1-204ENST00000558117 ADAMTSL2Q86TH1 951 aa4.77□□□□□ -1.65
RTF1-204ENST00000558117 SLC26A11Q86WA9 606 aa4.77□□□□□ -1.65
RTF1-204ENST00000558117 AMIGO1Q86WK6 493 aa4.77□□□□□ -1.65
RTF1-204ENST00000558117 NUDT13Q86X67 352 aa4.77□□□□□ -1.65
RTF1-204ENST00000558117 KIF2BQ8N4N8 673 aa4.77□□□□□ -1.65
RTF1-204ENST00000558117 TTC29Q8NA56 475 aaPredicted RBP4.77□□□□□ -1.65
RTF1-204ENST00000558117 THAP8Q8NA92 274 aa4.77□□□□□ -1.65
RTF1-204ENST00000558117 OR52M1Q8NGK5 317 aa4.77□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms