RNA–Protein interactions for RNA: ENST00000556432.1

ACTN1-219, Transcript of actinin alpha 1, humanhuman

TSL 1 (best)

Gene ACTN1, Length 558 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-219ENST00000556432 GSG1Q2KHT4 349 aa11.92□□□□□ -0.5
ACTN1-219ENST00000556432 C6orf136Q5SQH8 315 aa11.92□□□□□ -0.5
ACTN1-219ENST00000556432 TMEM154Q6P9G4 183 aa11.92□□□□□ -0.5
ACTN1-219ENST00000556432 ANKRD46Q86W74 232 aa11.92□□□□□ -0.5
ACTN1-219ENST00000556432 HOMEZQ8IX15 550 aa11.92□□□□□ -0.5
ACTN1-219ENST00000556432 ANKK1Q8NFD2 765 aa11.92□□□□□ -0.5
ACTN1-219ENST00000556432 MZB1Q8WU39 189 aa11.92□□□□□ -0.5
ACTN1-219ENST00000556432 ZNF837Q96EG3 531 aaPredicted RBP11.92□□□□□ -0.5
ACTN1-219ENST00000556432 ZNF385DQ9H6B1 395 aa11.92□□□□□ -0.5
ACTN1-219ENST00000556432 MID2Q9UJV3 735 aa11.92□□□□□ -0.5
ACTN1-219ENST00000556432 RCE1Q9Y256 329 aa11.92□□□□□ -0.5
ACTN1-219ENST00000556432 AGAP5A6NIR3 686 aa11.91□□□□□ -0.5
ACTN1-219ENST00000556432 POM121CA8CG34 1229 aa11.91□□□□□ -0.5
ACTN1-219ENST00000556432 ZNF99A8MXY4 864 aaPredicted RBP11.91□□□□□ -0.5
ACTN1-219ENST00000556432 RPL36A-HNRNPH2H7BZ11 118 aa11.91□□□□□ -0.5
ACTN1-219ENST00000556432 RNASET2O00584 256 aaKnown RBP11.91□□□□□ -0.5
ACTN1-219ENST00000556432 COPEO14579 308 aa11.91□□□□□ -0.5
ACTN1-219ENST00000556432 RIPK2O43353 540 aa11.91□□□□□ -0.5
ACTN1-219ENST00000556432 TPD52L2O43399 206 aaKnown RBP11.91□□□□□ -0.5
ACTN1-219ENST00000556432 TRIM13O60858 407 aa11.91□□□□□ -0.5
ACTN1-219ENST00000556432 RAB36O95755 333 aa11.91□□□□□ -0.5
ACTN1-219ENST00000556432 GKN3PP0CG01 181 aa11.91□□□□□ -0.5
ACTN1-219ENST00000556432 G6PDP11413 515 aa11.91□□□□□ -0.5
ACTN1-219ENST00000556432 NCF2P19878 526 aaPredicted RBP11.91□□□□□ -0.5
ACTN1-219ENST00000556432 UQCRC2P22695 453 aa11.91□□□□□ -0.5
ACTN1-219ENST00000556432 GATA3P23771 443 aa11.91□□□□□ -0.5
ACTN1-219ENST00000556432 CRHR1P34998 444 aa11.91□□□□□ -0.5
ACTN1-219ENST00000556432 MAGEB1P43366 347 aa11.91□□□□□ -0.5
ACTN1-219ENST00000556432 PTDSS1P48651 473 aaKnown RBP11.91□□□□□ -0.5
ACTN1-219ENST00000556432 CCL8P80075 99 aa11.91□□□□□ -0.5
ACTN1-219ENST00000556432 BAMBIQ13145 260 aa11.91□□□□□ -0.5
ACTN1-219ENST00000556432 GSTA3Q16772 222 aa11.91□□□□□ -0.5
ACTN1-219ENST00000556432 UGT3A2Q3SY77 523 aa11.91□□□□□ -0.5
ACTN1-219ENST00000556432 XKR7Q5GH72 579 aa11.91□□□□□ -0.5
ACTN1-219ENST00000556432 AP1ARQ63HQ0 302 aa11.91□□□□□ -0.5
ACTN1-219ENST00000556432 ATG16L1Q676U5 607 aa11.91□□□□□ -0.5
ACTN1-219ENST00000556432 TRMT10CQ7L0Y3 403 aaKnown RBP11.91□□□□□ -0.5
ACTN1-219ENST00000556432 ZNF440Q8IYI8 595 aa11.91□□□□□ -0.5
ACTN1-219ENST00000556432 ANKFN1Q8N957 763 aa11.91□□□□□ -0.5
ACTN1-219ENST00000556432 SNX33Q8WV41 574 aa11.91□□□□□ -0.5
ACTN1-219ENST00000556432 TUBGCP3Q96CW5 907 aa11.91□□□□□ -0.5
ACTN1-219ENST00000556432 C3orf30Q96M34 536 aa11.91□□□□□ -0.5
ACTN1-219ENST00000556432 ZMAT3Q9HA38 289 aaKnown RBP11.91□□□□□ -0.5
ACTN1-219ENST00000556432 MARCOQ9UEW3 520 aaPredicted RBP11.91□□□□□ -0.5
ACTN1-219ENST00000556432 M0R3G1 203 aa11.9□□□□□ -0.5
ACTN1-219ENST00000556432 AKAP8O43823 692 aaKnown RBP11.9□□□□□ -0.5
ACTN1-219ENST00000556432 IGHV2-5P01817 119 aa11.9□□□□□ -0.5
ACTN1-219ENST00000556432 FGF4P08620 206 aa11.9□□□□□ -0.5
ACTN1-219ENST00000556432 TFPTP0C1Z6 253 aa11.9□□□□□ -0.5
ACTN1-219ENST00000556432 PNMTP11086 282 aa11.9□□□□□ -0.5
ACTN1-219ENST00000556432 SELENOVP59797 346 aa11.9□□□□□ -0.5
ACTN1-219ENST00000556432 LCN2P80188 198 aa11.9□□□□□ -0.5
ACTN1-219ENST00000556432 PCLAFQ15004 111 aa11.9□□□□□ -0.5
ACTN1-219ENST00000556432 SYPL1Q16563 259 aa11.9□□□□□ -0.5
ACTN1-219ENST00000556432 ARMCX4Q5H9R4 360 aa11.9□□□□□ -0.5
ACTN1-219ENST00000556432 CARD17Q5XLA6 110 aa11.9□□□□□ -0.5
ACTN1-219ENST00000556432 SAXO2Q658L1 398 aa11.9□□□□□ -0.5
ACTN1-219ENST00000556432 WBP2NLQ6ICG8 309 aa11.9□□□□□ -0.5
ACTN1-219ENST00000556432 ZNF813Q6ZN06 617 aa11.9□□□□□ -0.5
ACTN1-219ENST00000556432 RETREG3Q86VR2 466 aa11.9□□□□□ -0.5
ACTN1-219ENST00000556432 CNPY4Q8N129 248 aa11.9□□□□□ -0.5
ACTN1-219ENST00000556432 PIK3C3Q8NEB9 887 aa11.9□□□□□ -0.5
ACTN1-219ENST00000556432 DVL3Q92997 716 aaPredicted RBP11.9□□□□□ -0.5
ACTN1-219ENST00000556432 TIMD4Q96H15 378 aa11.9□□□□□ -0.5
ACTN1-219ENST00000556432 TRNT1Q96Q11 434 aaKnown RBP11.9□□□□□ -0.5
ACTN1-219ENST00000556432 GAL3ST1Q99999 423 aa11.9□□□□□ -0.5
ACTN1-219ENST00000556432 SLC35A5Q9BS91 424 aa11.9□□□□□ -0.5
ACTN1-219ENST00000556432 RLIMQ9NVW2 624 aa11.9□□□□□ -0.5
ACTN1-219ENST00000556432 TAAR3PQ9P1P4 343 aa11.9□□□□□ -0.5
ACTN1-219ENST00000556432 OPN4Q9UHM6 478 aa11.9□□□□□ -0.5
ACTN1-219ENST00000556432 GPR160Q9UJ42 338 aa11.9□□□□□ -0.5
ACTN1-219ENST00000556432 IGHV1-69-2A0A0G2JMI3 117 aa11.89□□□□□ -0.51
ACTN1-219ENST00000556432 PRAMEF27A3QJZ7 478 aa11.89□□□□□ -0.51
ACTN1-219ENST00000556432 ISPDA4D126 451 aa11.89□□□□□ -0.51
ACTN1-219ENST00000556432 SMIM23A6NLE4 172 aa11.89□□□□□ -0.51
ACTN1-219ENST00000556432 CLDN25C9JDP6 229 aa11.89□□□□□ -0.51
ACTN1-219ENST00000556432 HMGN4O00479 90 aa11.89□□□□□ -0.51
ACTN1-219ENST00000556432 DEAF1O75398 565 aaPredicted RBP11.89□□□□□ -0.51
ACTN1-219ENST00000556432 NR2F1P10589 423 aa11.89□□□□□ -0.51
ACTN1-219ENST00000556432 ZNF35P13682 527 aa11.89□□□□□ -0.51
ACTN1-219ENST00000556432 RPS5P46782 204 aaKnown RBP11.89□□□□□ -0.51
ACTN1-219ENST00000556432 GIPRP48546 466 aa11.89□□□□□ -0.51
ACTN1-219ENST00000556432 CLDN8P56748 225 aa11.89□□□□□ -0.51
ACTN1-219ENST00000556432 TEKQ02763 1124 aa11.89□□□□□ -0.51
ACTN1-219ENST00000556432 MAD2L1Q13257 205 aaPredicted RBP11.89□□□□□ -0.51
ACTN1-219ENST00000556432 CHI3L2Q15782 390 aa11.89□□□□□ -0.51
ACTN1-219ENST00000556432 DOK3Q7L591 496 aa11.89□□□□□ -0.51
ACTN1-219ENST00000556432 PEX5LQ8IYB4 626 aa11.89□□□□□ -0.51
ACTN1-219ENST00000556432 TAF15Q92804 592 aaKnown RBP eCLIP11.89□□□□□ -0.51
ACTN1-219ENST00000556432 SLC25A28Q96A46 364 aa11.89□□□□□ -0.51
ACTN1-219ENST00000556432 NEURL3Q96EH8 262 aa11.89□□□□□ -0.51
ACTN1-219ENST00000556432 OXGR1Q96P68 337 aa11.89□□□□□ -0.51
ACTN1-219ENST00000556432 OR2M2Q96R28 347 aa11.89□□□□□ -0.51
ACTN1-219ENST00000556432 SLC38A1Q9H2H9 487 aa11.89□□□□□ -0.51
ACTN1-219ENST00000556432 MTHFD2LQ9H903 347 aaPredicted RBP11.89□□□□□ -0.51
ACTN1-219ENST00000556432 HINT3Q9NQE9 182 aaKnown RBP11.89□□□□□ -0.51
ACTN1-219ENST00000556432 DECR2Q9NUI1 292 aa11.89□□□□□ -0.51
ACTN1-219ENST00000556432 UBAP1Q9NZ09 502 aa11.89□□□□□ -0.51
ACTN1-219ENST00000556432 NOP53Q9NZM5 478 aaKnown RBP11.89□□□□□ -0.51
ACTN1-219ENST00000556432 POFUT2Q9Y2G5 429 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms