RNA–Protein interactions for RNA: ENST00000556310.1

SLIRP-205, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2

Gene SLIRP, Length 626 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-205ENST00000556310 C17orf78Q8N4C9 275 aa10.15□□□□□ -0.78
SLIRP-205ENST00000556310 MUCL1Q96DR8 90 aa10.15□□□□□ -0.78
SLIRP-205ENST00000556310 MOGAT1Q96PD6 335 aa10.15□□□□□ -0.78
SLIRP-205ENST00000556310 ALPK1Q96QP1 1244 aa10.15□□□□□ -0.78
SLIRP-205ENST00000556310 ASPNQ9BXN1 380 aa10.15□□□□□ -0.78
SLIRP-205ENST00000556310 SLC19A3Q9BZV2 496 aa10.15□□□□□ -0.78
SLIRP-205ENST00000556310 CXXC4Q9H2H0 198 aa10.15□□□□□ -0.78
SLIRP-205ENST00000556310 ESRP2Q9H6T0 727 aaKnown RBP10.15□□□□□ -0.78
SLIRP-205ENST00000556310 UBTD1Q9HAC8 227 aa10.15□□□□□ -0.78
SLIRP-205ENST00000556310 MRPL39Q9NYK5 338 aaKnown RBP10.15□□□□□ -0.78
SLIRP-205ENST00000556310 SLC7A7Q9UM01 511 aa10.15□□□□□ -0.78
SLIRP-205ENST00000556310 ARL2BPQ9Y2Y0 163 aa10.15□□□□□ -0.78
SLIRP-205ENST00000556310 PLCE1Q9P212 2302 aa10.15□□□□□ -0.79
SLIRP-205ENST00000556310 TRAF3IP2O43734 574 aaPredicted RBP10.14□□□□□ -0.79
SLIRP-205ENST00000556310 DCTN3O75935 186 aa10.14□□□□□ -0.79
SLIRP-205ENST00000556310 OR5F1O95221 314 aa10.14□□□□□ -0.79
SLIRP-205ENST00000556310 SNRPBP14678 240 aaKnown RBP10.14□□□□□ -0.79
SLIRP-205ENST00000556310 NQO1P15559 274 aaKnown RBP10.14□□□□□ -0.79
SLIRP-205ENST00000556310 CD53P19397 219 aa10.14□□□□□ -0.79
SLIRP-205ENST00000556310 CBLP22681 906 aa10.14□□□□□ -0.79
SLIRP-205ENST00000556310 SELENOPP49908 381 aa10.14□□□□□ -0.79
SLIRP-205ENST00000556310 FOXG1P55316 489 aaPredicted RBP10.14□□□□□ -0.79
SLIRP-205ENST00000556310 TAS2R41P59536 307 aa10.14□□□□□ -0.79
SLIRP-205ENST00000556310 PSME3P61289 254 aa10.14□□□□□ -0.79
SLIRP-205ENST00000556310 LTBQ06643 244 aa10.14□□□□□ -0.79
SLIRP-205ENST00000556310 GABRA6Q16445 453 aa10.14□□□□□ -0.79
SLIRP-205ENST00000556310 ACKR1Q16570 336 aa10.14□□□□□ -0.79
SLIRP-205ENST00000556310 NCMAPQ5T1S8 102 aa10.14□□□□□ -0.79
SLIRP-205ENST00000556310 C1QTNF12Q5T7M4 302 aa10.14□□□□□ -0.79
SLIRP-205ENST00000556310 ALKBH2Q6NS38 261 aa10.14□□□□□ -0.79
SLIRP-205ENST00000556310 NIPAL3Q6P499 406 aa10.14□□□□□ -0.79
SLIRP-205ENST00000556310 TTC33Q6PID6 262 aaPredicted RBP10.14□□□□□ -0.79
SLIRP-205ENST00000556310 DEF8Q6ZN54 512 aa10.14□□□□□ -0.79
SLIRP-205ENST00000556310 KDM8Q8N371 416 aa10.14□□□□□ -0.79
SLIRP-205ENST00000556310 C10orf53Q8N6V4 93 aa10.14□□□□□ -0.79
SLIRP-205ENST00000556310 LZICQ8WZA0 190 aa10.14□□□□□ -0.79
SLIRP-205ENST00000556310 MUS81Q96NY9 551 aa10.14□□□□□ -0.79
SLIRP-205ENST00000556310 ALKBH3Q96Q83 286 aaPredicted RBP10.14□□□□□ -0.79
SLIRP-205ENST00000556310 LINC00470Q9BZP3 86 aa10.14□□□□□ -0.79
SLIRP-205ENST00000556310 SPAG4Q9NPE6 437 aa10.14□□□□□ -0.79
SLIRP-205ENST00000556310 RNF115Q9Y4L5 304 aa10.14□□□□□ -0.79
SLIRP-205ENST00000556310 FLNAP21333 2647 aaKnown RBP10.14□□□□□ -0.79
SLIRP-205ENST00000556310 ZNF587BE7ETH6 402 aa10.13□□□□□ -0.79
SLIRP-205ENST00000556310 LRRN3E7EW58 273 aa10.13□□□□□ -0.79
SLIRP-205ENST00000556310 CXCR6O00574 342 aa10.13□□□□□ -0.79
SLIRP-205ENST00000556310 GSTA4O15217 222 aa10.13□□□□□ -0.79
SLIRP-205ENST00000556310 SLC43A1O75387 559 aa10.13□□□□□ -0.79
SLIRP-205ENST00000556310 KRT33AO76009 404 aa10.13□□□□□ -0.79
SLIRP-205ENST00000556310 ZNF432O94892 652 aa10.13□□□□□ -0.79
SLIRP-205ENST00000556310 HPRP00739 348 aa10.13□□□□□ -0.79
SLIRP-205ENST00000556310 CD3EP07766 207 aa10.13□□□□□ -0.79
SLIRP-205ENST00000556310 THRBP10828 461 aa10.13□□□□□ -0.79
SLIRP-205ENST00000556310 HOXC12P31275 282 aa10.13□□□□□ -0.79
SLIRP-205ENST00000556310 RBM34P42696 430 aaKnown RBP10.13□□□□□ -0.79
SLIRP-205ENST00000556310 OR1E2P47887 323 aa10.13□□□□□ -0.79
SLIRP-205ENST00000556310 CLDN17P56750 224 aa10.13□□□□□ -0.79
SLIRP-205ENST00000556310 SELENOWP63302 87 aa10.13□□□□□ -0.79
SLIRP-205ENST00000556310 IL1RL1Q01638 556 aa10.13□□□□□ -0.79
SLIRP-205ENST00000556310 BSPH1Q075Z2 132 aa10.13□□□□□ -0.79
SLIRP-205ENST00000556310 PUDPQ08623 228 aa10.13□□□□□ -0.79
SLIRP-205ENST00000556310 PMS2P3Q13401 168 aa10.13□□□□□ -0.79
SLIRP-205ENST00000556310 C1DQ13901 141 aaKnown RBP10.13□□□□□ -0.79
SLIRP-205ENST00000556310 ZNF74Q16587 644 aa10.13□□□□□ -0.79
SLIRP-205ENST00000556310 DEFB113Q30KQ7 82 aa10.13□□□□□ -0.79
SLIRP-205ENST00000556310 C9orf135Q5VTT2 229 aa10.13□□□□□ -0.79
SLIRP-205ENST00000556310 UEVLDQ8IX04 471 aa10.13□□□□□ -0.79
SLIRP-205ENST00000556310 OR5J2Q8NH18 312 aa10.13□□□□□ -0.79
SLIRP-205ENST00000556310 TPD52L3Q96J77 140 aa10.13□□□□□ -0.79
SLIRP-205ENST00000556310 LRRC37BQ96QE4 947 aa10.13□□□□□ -0.79
SLIRP-205ENST00000556310 KCTD14Q9BQ13 255 aaPredicted RBP10.13□□□□□ -0.79
SLIRP-205ENST00000556310 PRSS27Q9BQR3 290 aa10.13□□□□□ -0.79
SLIRP-205ENST00000556310 FKRPQ9H9S5 495 aa10.13□□□□□ -0.79
SLIRP-205ENST00000556310 BEX4Q9NWD9 120 aaPredicted RBP10.13□□□□□ -0.79
SLIRP-205ENST00000556310 NPAP1Q9NZP6 1156 aa10.13□□□□□ -0.79
SLIRP-205ENST00000556310 AMDHD2Q9Y303 409 aa10.13□□□□□ -0.79
SLIRP-205ENST00000556310 NOX1Q9Y5S8 564 aa10.13□□□□□ -0.79
SLIRP-205ENST00000556310 SLC25A15Q9Y619 301 aa10.13□□□□□ -0.79
SLIRP-205ENST00000556310 ARID1AO14497 2285 aa10.13□□□□□ -0.79
SLIRP-205ENST00000556310 MS4A18H0YCH9 400 aa10.12□□□□□ -0.79
SLIRP-205ENST00000556310 KPNA4O00629 521 aaPredicted RBP10.12□□□□□ -0.79
SLIRP-205ENST00000556310 PLPP3O14495 311 aa10.12□□□□□ -0.79
SLIRP-205ENST00000556310 HS3ST1O14792 307 aa10.12□□□□□ -0.79
SLIRP-205ENST00000556310 SHOX2O60902 331 aaPredicted RBP10.12□□□□□ -0.79
SLIRP-205ENST00000556310 UPK3AO75631 287 aa10.12□□□□□ -0.79
SLIRP-205ENST00000556310 PLAUP00749 431 aa10.12□□□□□ -0.79
SLIRP-205ENST00000556310 IGF2P01344 180 aa10.12□□□□□ -0.79
SLIRP-205ENST00000556310 SH3BGRP55822 239 aaPredicted RBP10.12□□□□□ -0.79
SLIRP-205ENST00000556310 POU3F1Q03052 451 aaPredicted RBP10.12□□□□□ -0.79
SLIRP-205ENST00000556310 LGALS3BPQ08380 585 aa10.12□□□□□ -0.79
SLIRP-205ENST00000556310 PIN1Q13526 163 aaPredicted RBP10.12□□□□□ -0.79
SLIRP-205ENST00000556310 MS4A18Q3C1V0 323 aa10.12□□□□□ -0.79
SLIRP-205ENST00000556310 ADAM5Q6NVV9 412 aa10.12□□□□□ -0.79
SLIRP-205ENST00000556310 KLHL24Q6TFL4 600 aa10.12□□□□□ -0.79
SLIRP-205ENST00000556310 CBLL1Q75N03 491 aa10.12□□□□□ -0.79
SLIRP-205ENST00000556310 VTCN1Q7Z7D3 282 aa10.12□□□□□ -0.79
SLIRP-205ENST00000556310 TMEM123Q8N131 208 aa10.12□□□□□ -0.79
SLIRP-205ENST00000556310 ANKS4BQ8N8V4 417 aa10.12□□□□□ -0.79
SLIRP-205ENST00000556310 OR52N5Q8NH56 324 aa10.12□□□□□ -0.79
SLIRP-205ENST00000556310 GEMIN6Q8WXD5 167 aaKnown RBP10.12□□□□□ -0.79
SLIRP-205ENST00000556310 PIGTQ969N2 578 aa10.12□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms