RNA–Protein interactions for RNA: ENST00000555535.1

SRP54-207, Transcript of signal recognition particle 54, humanhuman

TSL 4

Gene SRP54, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-207ENST00000555535 SCN4AP35499 1836 aa0.92□□□□□ -2.26
SRP54-207ENST00000555535 FRMPD4Q14CM0 1322 aa0.91□□□□□ -2.26
SRP54-207ENST00000555535 NCAPD2Q15021 1401 aa0.91□□□□□ -2.26
SRP54-207ENST00000555535 IGHV5-51A0A0C4DH38 117 aa0.91□□□□□ -2.26
SRP54-207ENST00000555535 RGSL1A5PLK6 1076 aa0.91□□□□□ -2.26
SRP54-207ENST00000555535 PRPSAP2O60256 369 aa0.91□□□□□ -2.26
SRP54-207ENST00000555535 UGT1A9O60656 530 aa0.91□□□□□ -2.26
SRP54-207ENST00000555535 ATP5LO75964 103 aa0.91□□□□□ -2.26
SRP54-207ENST00000555535 OXSR1O95747 527 aaPredicted RBP0.91□□□□□ -2.26
SRP54-207ENST00000555535 AK1P00568 194 aa0.91□□□□□ -2.26
SRP54-207ENST00000555535 IFNB1P01574 187 aa0.91□□□□□ -2.26
SRP54-207ENST00000555535 KLK3P07288 261 aaPredicted RBP0.91□□□□□ -2.26
SRP54-207ENST00000555535 EPB41P11171 864 aaKnown RBP0.91□□□□□ -2.26
SRP54-207ENST00000555535 CCDC130P13994 396 aa0.91□□□□□ -2.26
SRP54-207ENST00000555535 OMGP23515 440 aa0.91□□□□□ -2.26
SRP54-207ENST00000555535 PAX7P23759 505 aa0.91□□□□□ -2.26
SRP54-207ENST00000555535 PSMA2P25787 234 aa0.91□□□□□ -2.26
SRP54-207ENST00000555535 GCAP28676 217 aa0.91□□□□□ -2.26
SRP54-207ENST00000555535 CALCRP30988 508 aa0.91□□□□□ -2.26
SRP54-207ENST00000555535 AP3M2P53677 418 aa0.91□□□□□ -2.26
SRP54-207ENST00000555535 POLR2FP61218 127 aaKnown RBP0.91□□□□□ -2.26
SRP54-207ENST00000555535 IRF4Q15306 451 aa0.91□□□□□ -2.26
SRP54-207ENST00000555535 SAMD4BQ5PRF9 694 aaKnown RBP0.91□□□□□ -2.26
SRP54-207ENST00000555535 VAX1Q5SQQ9 334 aa0.91□□□□□ -2.26
SRP54-207ENST00000555535 C10orf120Q5SQS8 335 aa0.91□□□□□ -2.26
SRP54-207ENST00000555535 CNSTQ6PJW8 725 aa0.91□□□□□ -2.26
SRP54-207ENST00000555535 NCCRP1Q6ZVX7 275 aaPredicted RBP0.91□□□□□ -2.26
SRP54-207ENST00000555535 ZDHHC21Q8IVQ6 265 aa0.91□□□□□ -2.26
SRP54-207ENST00000555535 CENPLQ8N0S6 344 aaPredicted RBP0.91□□□□□ -2.26
SRP54-207ENST00000555535 ZNF619Q8N2I2 560 aa0.91□□□□□ -2.26
SRP54-207ENST00000555535 HDDC3Q8N4P3 179 aa0.91□□□□□ -2.26
SRP54-207ENST00000555535 ACOT4Q8N9L9 421 aa0.91□□□□□ -2.26
SRP54-207ENST00000555535 CATSPER1Q8NEC5 780 aa0.91□□□□□ -2.26
SRP54-207ENST00000555535 OR4D9Q8NGE8 314 aa0.91□□□□□ -2.26
SRP54-207ENST00000555535 ACTRT1Q8TDG2 376 aa0.91□□□□□ -2.26
SRP54-207ENST00000555535 MAIP1Q8WWC4 291 aa0.91□□□□□ -2.26
SRP54-207ENST00000555535 NEURL3Q96EH8 262 aa0.91□□□□□ -2.26
SRP54-207ENST00000555535 C14orf79Q96F83 325 aa0.91□□□□□ -2.26
SRP54-207ENST00000555535 PDXPQ96GD0 296 aa0.91□□□□□ -2.26
SRP54-207ENST00000555535 KCNK16Q96T55 309 aa0.91□□□□□ -2.26
SRP54-207ENST00000555535 RIT2Q99578 217 aa0.91□□□□□ -2.26
SRP54-207ENST00000555535 MRPL45Q9BRJ2 306 aaKnown RBP0.91□□□□□ -2.26
SRP54-207ENST00000555535 HSD3B7Q9H2F3 369 aa0.91□□□□□ -2.26
SRP54-207ENST00000555535 SRMSQ9H3Y6 488 aa0.91□□□□□ -2.26
SRP54-207ENST00000555535 RBKSQ9H477 322 aa0.91□□□□□ -2.26
SRP54-207ENST00000555535 RPP21Q9H633 154 aaKnown RBP0.91□□□□□ -2.26
SRP54-207ENST00000555535 WDR76Q9H967 626 aa0.91□□□□□ -2.26
SRP54-207ENST00000555535 ELOVL3Q9HB03 270 aa0.91□□□□□ -2.26
SRP54-207ENST00000555535 POPDC2Q9HBU9 364 aa0.91□□□□□ -2.26
SRP54-207ENST00000555535 RAB18Q9NP72 206 aa0.91□□□□□ -2.26
SRP54-207ENST00000555535 THUMPD1Q9NXG2 353 aaKnown RBP0.91□□□□□ -2.26
SRP54-207ENST00000555535 QPCTLQ9NXS2 382 aa0.91□□□□□ -2.26
SRP54-207ENST00000555535 SIGLEC8Q9NYZ4 499 aa0.91□□□□□ -2.26
SRP54-207ENST00000555535 IL36GQ9NZH8 169 aa0.91□□□□□ -2.26
SRP54-207ENST00000555535 SEC14L3Q9UDX4 400 aa0.91□□□□□ -2.26
SRP54-207ENST00000555535 MMP17Q9ULZ9 603 aa0.91□□□□□ -2.26
SRP54-207ENST00000555535 MRPS33Q9Y291 106 aaKnown RBP0.91□□□□□ -2.26
SRP54-207ENST00000555535 MEMO1Q9Y316 297 aa0.91□□□□□ -2.26
SRP54-207ENST00000555535 MFHAS1Q9Y4C4 1052 aa0.91□□□□□ -2.26
SRP54-207ENST00000555535 ANKRD12Q6UB98 2062 aa0.91□□□□□ -2.26
SRP54-207ENST00000555535 SDK2Q58EX2 2172 aa0.91□□□□□ -2.26
SRP54-207ENST00000555535 TNS2Q63HR2 1409 aa0.9□□□□□ -2.26
SRP54-207ENST00000555535 A0A087WZY1 265 aa0.9□□□□□ -2.27
SRP54-207ENST00000555535 IGKV2-24A0A0C4DH68 120 aa0.9□□□□□ -2.27
SRP54-207ENST00000555535 LRP5LA4QPB2 252 aa0.9□□□□□ -2.27
SRP54-207ENST00000555535 A8MUI8 341 aa0.9□□□□□ -2.27
SRP54-207ENST00000555535 TRDCB7Z8K6 153 aa0.9□□□□□ -2.27
SRP54-207ENST00000555535 CLDN5O00501 218 aa0.9□□□□□ -2.27
SRP54-207ENST00000555535 ZSCAN12O43309 604 aa0.9□□□□□ -2.27
SRP54-207ENST00000555535 PFKFB2O60825 505 aa0.9□□□□□ -2.27
SRP54-207ENST00000555535 BAG2O95816 211 aa0.9□□□□□ -2.27
SRP54-207ENST00000555535 ALDOBP05062 364 aa0.9□□□□□ -2.27
SRP54-207ENST00000555535 KRT13P13646 458 aa0.9□□□□□ -2.27
SRP54-207ENST00000555535 ZNF30P17039 623 aa0.9□□□□□ -2.27
SRP54-207ENST00000555535 PGCP20142 388 aa0.9□□□□□ -2.27
SRP54-207ENST00000555535 SLC2A5P22732 501 aa0.9□□□□□ -2.27
SRP54-207ENST00000555535 YWHABP31946 246 aaKnown RBP0.9□□□□□ -2.27
SRP54-207ENST00000555535 STARD6P59095 220 aa0.9□□□□□ -2.27
SRP54-207ENST00000555535 ZNF816Q0VGE8 651 aaPredicted RBP0.9□□□□□ -2.27
SRP54-207ENST00000555535 SNRNP35Q16560 246 aaKnown RBP0.9□□□□□ -2.27
SRP54-207ENST00000555535 SGCAQ16586 387 aa0.9□□□□□ -2.27
SRP54-207ENST00000555535 SLC25A52Q3SY17 297 aa0.9□□□□□ -2.27
SRP54-207ENST00000555535 ZBED5Q49AG3 693 aa0.9□□□□□ -2.27
SRP54-207ENST00000555535 OR2G6Q5TZ20 316 aa0.9□□□□□ -2.27
SRP54-207ENST00000555535 LRRC8BQ6P9F7 803 aa0.9□□□□□ -2.27
SRP54-207ENST00000555535 CNIH2Q6PI25 160 aa0.9□□□□□ -2.27
SRP54-207ENST00000555535 HSDL2Q6YN16 418 aa0.9□□□□□ -2.27
SRP54-207ENST00000555535 NTM-AS1Q6ZSK4 140 aa0.9□□□□□ -2.27
SRP54-207ENST00000555535 PGAP1Q75T13 922 aa0.9□□□□□ -2.27
SRP54-207ENST00000555535 ECHDC2Q86YB7 292 aa0.9□□□□□ -2.27
SRP54-207ENST00000555535 RIMKLAQ8IXN7 391 aa0.9□□□□□ -2.27
SRP54-207ENST00000555535 SLC35F2Q8IXU6 374 aa0.9□□□□□ -2.27
SRP54-207ENST00000555535 TMEM123Q8N131 208 aa0.9□□□□□ -2.27
SRP54-207ENST00000555535 MRPL43Q8N983 215 aaKnown RBP0.9□□□□□ -2.27
SRP54-207ENST00000555535 CNNM3Q8NE01 707 aa0.9□□□□□ -2.27
SRP54-207ENST00000555535 CCDC110Q8TBZ0 833 aa0.9□□□□□ -2.27
SRP54-207ENST00000555535 CD300LFQ8TDQ1 290 aa0.9□□□□□ -2.27
SRP54-207ENST00000555535 PAGE5Q96GU1 130 aa0.9□□□□□ -2.27
SRP54-207ENST00000555535 TTC25Q96NG3 672 aa0.9□□□□□ -2.27
SRP54-207ENST00000555535 THUMPD2Q9BTF0 503 aaKnown RBP0.9□□□□□ -2.27
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms