RNA–Protein interactions for RNA: ENST00000555221.3

CKS1BP1-201, Transcript of CDC28 protein kinase regulatory subunit 1B pseudogene 1, humanhuman

BASIC

Gene CKS1BP1, Length 240 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP1-201ENST00000555221 RBMXP38159 391 aaKnown RBP3.76□□□□□ -1.81
CKS1BP1-201ENST00000555221 CAV2P51636 162 aa3.76□□□□□ -1.81
CKS1BP1-201ENST00000555221 ACTR3P61158 418 aa3.76□□□□□ -1.81
CKS1BP1-201ENST00000555221 ZNF763Q0D2J5 394 aa3.76□□□□□ -1.81
CKS1BP1-201ENST00000555221 LRRC74AQ0VAA2 488 aa3.76□□□□□ -1.81
CKS1BP1-201ENST00000555221 SCRN3Q0VDG4 424 aa3.76□□□□□ -1.81
CKS1BP1-201ENST00000555221 ATP6AP1Q15904 470 aa3.76□□□□□ -1.81
CKS1BP1-201ENST00000555221 SSX2Q16385 188 aa3.76□□□□□ -1.81
CKS1BP1-201ENST00000555221 RABL6Q3YEC7 729 aaPredicted RBP3.76□□□□□ -1.81
CKS1BP1-201ENST00000555221 BOLA3Q53S33 107 aa3.76□□□□□ -1.81
CKS1BP1-201ENST00000555221 CASC10Q5T4H9 136 aa3.76□□□□□ -1.81
CKS1BP1-201ENST00000555221 RNF165Q6ZSG1 346 aa3.76□□□□□ -1.81
CKS1BP1-201ENST00000555221 SH2D6Q7Z4S9 175 aa3.76□□□□□ -1.81
CKS1BP1-201ENST00000555221 PLA2G4DQ86XP0 818 aa3.76□□□□□ -1.81
CKS1BP1-201ENST00000555221 NUS1Q96E22 293 aa3.76□□□□□ -1.81
CKS1BP1-201ENST00000555221 TPD52L3Q96J77 140 aa3.76□□□□□ -1.81
CKS1BP1-201ENST00000555221 TCHPQ9BT92 498 aa3.76□□□□□ -1.81
CKS1BP1-201ENST00000555221 PPA2Q9H2U2 334 aa3.76□□□□□ -1.81
CKS1BP1-201ENST00000555221 ASB8Q9H765 288 aa3.76□□□□□ -1.81
CKS1BP1-201ENST00000555221 KCNIP3Q9Y2W7 256 aa3.76□□□□□ -1.81
CKS1BP1-201ENST00000555221 NEUROG3Q9Y4Z2 214 aa3.76□□□□□ -1.81
CKS1BP1-201ENST00000555221 PEX16Q9Y5Y5 336 aa3.76□□□□□ -1.81
CKS1BP1-201ENST00000555221 TIAM1Q13009 1591 aa3.76□□□□□ -1.81
CKS1BP1-201ENST00000555221 ROCK1Q13464 1354 aa3.76□□□□□ -1.81
CKS1BP1-201ENST00000555221 RAI1Q7Z5J4 1906 aaPredicted RBP3.76□□□□□ -1.81
CKS1BP1-201ENST00000555221 SUPT6HQ7KZ85 1726 aaKnown RBP3.75□□□□□ -1.81
CKS1BP1-201ENST00000555221 THSD7BQ9C0I4 1608 aa3.75□□□□□ -1.81
CKS1BP1-201ENST00000555221 ARHGEF35A5YM69 484 aa3.75□□□□□ -1.81
CKS1BP1-201ENST00000555221 A8MUA0 341 aa3.75□□□□□ -1.81
CKS1BP1-201ENST00000555221 E9PBE3 544 aa3.75□□□□□ -1.81
CKS1BP1-201ENST00000555221 UBXN8O00124 270 aa3.75□□□□□ -1.81
CKS1BP1-201ENST00000555221 SERPINA3P01011 423 aa3.75□□□□□ -1.81
CKS1BP1-201ENST00000555221 ZNF853P0CG23 659 aa3.75□□□□□ -1.81
CKS1BP1-201ENST00000555221 SLC2A3P11169 496 aa3.75□□□□□ -1.81
CKS1BP1-201ENST00000555221 RPS2P15880 293 aaKnown RBP3.75□□□□□ -1.81
CKS1BP1-201ENST00000555221 HTR1EP28566 365 aa3.75□□□□□ -1.81
CKS1BP1-201ENST00000555221 TAGLN2P37802 199 aaKnown RBP3.75□□□□□ -1.81
CKS1BP1-201ENST00000555221 NUP107P57740 925 aa3.75□□□□□ -1.81
CKS1BP1-201ENST00000555221 GNB2P62879 340 aa3.75□□□□□ -1.81
CKS1BP1-201ENST00000555221 DGUOKQ16854 277 aa3.75□□□□□ -1.81
CKS1BP1-201ENST00000555221 TAS2R42Q7RTR8 314 aa3.75□□□□□ -1.81
CKS1BP1-201ENST00000555221 EGFL6Q8IUX8 553 aa3.75□□□□□ -1.81
CKS1BP1-201ENST00000555221 ACOT4Q8N9L9 421 aa3.75□□□□□ -1.81
CKS1BP1-201ENST00000555221 OR6C4Q8NGE1 309 aa3.75□□□□□ -1.81
CKS1BP1-201ENST00000555221 PYROXD1Q8WU10 500 aa3.75□□□□□ -1.81
CKS1BP1-201ENST00000555221 TBRG4Q969Z0 631 aaKnown RBP eCLIP3.75□□□□□ -1.81
CKS1BP1-201ENST00000555221 ITCHQ96J02 903 aa3.75□□□□□ -1.81
CKS1BP1-201ENST00000555221 SLC35E1Q96K37 410 aa3.75□□□□□ -1.81
CKS1BP1-201ENST00000555221 CNN2Q99439 309 aaKnown RBP3.75□□□□□ -1.81
CKS1BP1-201ENST00000555221 NRIP2Q9BQI9 281 aa3.75□□□□□ -1.81
CKS1BP1-201ENST00000555221 GBA3Q9H227 469 aa3.75□□□□□ -1.81
CKS1BP1-201ENST00000555221 ANKRD19PQ9H560 264 aa3.75□□□□□ -1.81
CKS1BP1-201ENST00000555221 RANBP3Q9H6Z4 567 aaPredicted RBP3.75□□□□□ -1.81
CKS1BP1-201ENST00000555221 NANOGQ9H9S0 305 aa3.75□□□□□ -1.81
CKS1BP1-201ENST00000555221 IL26Q9NPH9 171 aa3.75□□□□□ -1.81
CKS1BP1-201ENST00000555221 GIN1Q9NXP7 522 aa3.75□□□□□ -1.81
CKS1BP1-201ENST00000555221 RRP15Q9Y3B9 282 aaKnown RBP3.75□□□□□ -1.81
CKS1BP1-201ENST00000555221 FGD6Q6ZV73 1430 aa3.75□□□□□ -1.81
CKS1BP1-201ENST00000555221 TRAPPC8Q9Y2L5 1435 aa3.75□□□□□ -1.81
CKS1BP1-201ENST00000555221 PCF11O94913 1555 aaKnown RBP3.75□□□□□ -1.81
CKS1BP1-201ENST00000555221 ZMYM4Q5VZL5 1548 aa3.75□□□□□ -1.81
CKS1BP1-201ENST00000555221 ZFYVE16Q7Z3T8 1539 aa3.75□□□□□ -1.81
CKS1BP1-201ENST00000555221 FRMPD3Q5JV73 1810 aa3.74□□□□□ -1.81
CKS1BP1-201ENST00000555221 A2MP01023 1474 aa3.74□□□□□ -1.81
CKS1BP1-201ENST00000555221 MBD5Q9P267 1494 aa3.74□□□□□ -1.81
CKS1BP1-201ENST00000555221 PPIAL4EA0A075B759 164 aa3.74□□□□□ -1.81
CKS1BP1-201ENST00000555221 FOXE1O00358 373 aaPredicted RBP3.74□□□□□ -1.81
CKS1BP1-201ENST00000555221 NDUFB10O96000 172 aa3.74□□□□□ -1.81
CKS1BP1-201ENST00000555221 PPIAL4FP0DN26 164 aa3.74□□□□□ -1.81
CKS1BP1-201ENST00000555221 ATP1B2P14415 290 aaPredicted RBP3.74□□□□□ -1.81
CKS1BP1-201ENST00000555221 ETS2P15036 469 aa3.74□□□□□ -1.81
CKS1BP1-201ENST00000555221 ELK1P19419 428 aa3.74□□□□□ -1.81
CKS1BP1-201ENST00000555221 HSD17B2P37059 387 aa3.74□□□□□ -1.81
CKS1BP1-201ENST00000555221 GSSP48637 474 aa3.74□□□□□ -1.81
CKS1BP1-201ENST00000555221 PRPS1P60891 318 aa3.74□□□□□ -1.81
CKS1BP1-201ENST00000555221 ERVK-25P63136 954 aa3.74□□□□□ -1.81
CKS1BP1-201ENST00000555221 PRAMEF5Q5TYX0 476 aa3.74□□□□□ -1.81
CKS1BP1-201ENST00000555221 PRAMEF6Q5VXH4 476 aa3.74□□□□□ -1.81
CKS1BP1-201ENST00000555221 UQCC3Q6UW78 93 aa3.74□□□□□ -1.81
CKS1BP1-201ENST00000555221 IL34Q6ZMJ4 242 aa3.74□□□□□ -1.81
CKS1BP1-201ENST00000555221 PNKDQ8N490 385 aa3.74□□□□□ -1.81
CKS1BP1-201ENST00000555221 OR9K2Q8NGE7 335 aa3.74□□□□□ -1.81
CKS1BP1-201ENST00000555221 OR9G1Q8NH87 305 aa3.74□□□□□ -1.81
CKS1BP1-201ENST00000555221 KCNA7Q96RP8 456 aa3.74□□□□□ -1.81
CKS1BP1-201ENST00000555221 CHRDL1Q9BU40 450 aa3.74□□□□□ -1.81
CKS1BP1-201ENST00000555221 ROGDIQ9GZN7 287 aa3.74□□□□□ -1.81
CKS1BP1-201ENST00000555221 NT5MQ9NPB1 228 aa3.74□□□□□ -1.81
CKS1BP1-201ENST00000555221 MYO5CQ9NQX4 1742 aa3.74□□□□□ -1.81
CKS1BP1-201ENST00000555221 IKZF2Q9UKS7 526 aa3.74□□□□□ -1.81
CKS1BP1-201ENST00000555221 CELA1Q9UNI1 258 aa3.74□□□□□ -1.81
CKS1BP1-201ENST00000555221 AGLP35573 1532 aa3.74□□□□□ -1.81
CKS1BP1-201ENST00000555221 KIF15Q9NS87 1388 aa3.74□□□□□ -1.81
CKS1BP1-201ENST00000555221 NPATQ14207 1427 aa3.73□□□□□ -1.81
CKS1BP1-201ENST00000555221 NCOA1Q15788 1441 aa3.73□□□□□ -1.81
CKS1BP1-201ENST00000555221 A0A1W2PPE3 182 aa3.73□□□□□ -1.81
CKS1BP1-201ENST00000555221 USP27XA6NNY8 438 aa3.73□□□□□ -1.81
CKS1BP1-201ENST00000555221 TRIM49D1C9J1S8 452 aa3.73□□□□□ -1.81
CKS1BP1-201ENST00000555221 ICAM2P13598 275 aa3.73□□□□□ -1.81
CKS1BP1-201ENST00000555221 ABOP16442 354 aa3.73□□□□□ -1.81
CKS1BP1-201ENST00000555221 PBLDP30039 288 aaPredicted RBP3.73□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms