RNA–Protein interactions for RNA: ENST00000554384.1

CHD8-207, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 3

Gene CHD8, Length 735 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-207ENST00000554384 ZNF670Q9BS34 389 aa3.63□□□□□ -1.83
CHD8-207ENST00000554384 SLC35A5Q9BS91 424 aa3.63□□□□□ -1.83
CHD8-207ENST00000554384 LRRN3Q9H3W5 708 aa3.63□□□□□ -1.83
CHD8-207ENST00000554384 VCPKMTQ9H867 229 aa3.63□□□□□ -1.83
CHD8-207ENST00000554384 POLDIP2Q9Y2S7 368 aa3.63□□□□□ -1.83
CHD8-207ENST00000554384 SCN9AQ15858 1988 aa3.63□□□□□ -1.83
CHD8-207ENST00000554384 GPR179Q6PRD1 2367 aa3.62□□□□□ -1.83
CHD8-207ENST00000554384 REV3LO60673 3130 aa3.62□□□□□ -1.83
CHD8-207ENST00000554384 C15orf38-AP3S2A0A0A6YYH1 394 aa3.62□□□□□ -1.83
CHD8-207ENST00000554384 FAM231BA6NCW3 169 aa3.62□□□□□ -1.83
CHD8-207ENST00000554384 HDAC3O15379 428 aa3.62□□□□□ -1.83
CHD8-207ENST00000554384 RGS16O15492 202 aaPredicted RBP3.62□□□□□ -1.83
CHD8-207ENST00000554384 RIPK2O43353 540 aa3.62□□□□□ -1.83
CHD8-207ENST00000554384 OR10H3O60404 316 aa3.62□□□□□ -1.83
CHD8-207ENST00000554384 N4BP1O75113 896 aaKnown RBP3.62□□□□□ -1.83
CHD8-207ENST00000554384 IL1BP01584 269 aa3.62□□□□□ -1.83
CHD8-207ENST00000554384 IL9P15248 144 aa3.62□□□□□ -1.83
CHD8-207ENST00000554384 ZNF44P15621 663 aa3.62□□□□□ -1.83
CHD8-207ENST00000554384 SLC26A2P50443 739 aa3.62□□□□□ -1.83
CHD8-207ENST00000554384 DAP3P51398 398 aaKnown RBP3.62□□□□□ -1.83
CHD8-207ENST00000554384 PPIL2Q13356 520 aa3.62□□□□□ -1.83
CHD8-207ENST00000554384 HERPUD1Q15011 391 aa3.62□□□□□ -1.83
CHD8-207ENST00000554384 ZNF79Q15937 498 aa3.62□□□□□ -1.83
CHD8-207ENST00000554384 UQCC3Q6UW78 93 aa3.62□□□□□ -1.83
CHD8-207ENST00000554384 SVOPLQ8N434 492 aa3.62□□□□□ -1.83
CHD8-207ENST00000554384 TMEM252Q8N6L7 170 aa3.62□□□□□ -1.83
CHD8-207ENST00000554384 C14orf178Q8N769 122 aaPredicted RBP3.62□□□□□ -1.83
CHD8-207ENST00000554384 FAM110BQ8TC76 370 aa3.62□□□□□ -1.83
CHD8-207ENST00000554384 FGF11Q92914 225 aa3.62□□□□□ -1.83
CHD8-207ENST00000554384 NIPSNAP3BQ9BS92 247 aa3.62□□□□□ -1.83
CHD8-207ENST00000554384 KRTAP4-3Q9BYR4 195 aa3.62□□□□□ -1.83
CHD8-207ENST00000554384 OR51J1Q9H342 316 aa3.62□□□□□ -1.83
CHD8-207ENST00000554384 POLE4Q9NR33 117 aa3.62□□□□□ -1.83
CHD8-207ENST00000554384 SMOXQ9NWM0 555 aa3.62□□□□□ -1.83
CHD8-207ENST00000554384 TRMT112Q9UI30 125 aaKnown RBP3.62□□□□□ -1.83
CHD8-207ENST00000554384 PHF11Q9UIL8 331 aa3.62□□□□□ -1.83
CHD8-207ENST00000554384 COL4A1P02462 1669 aa3.62□□□□□ -1.83
CHD8-207ENST00000554384 COL1A1P02452 1464 aaPredicted RBP3.61□□□□□ -1.83
CHD8-207ENST00000554384 DNAH12Q6ZR08 3092 aa3.61□□□□□ -1.83
CHD8-207ENST00000554384 ACACBO00763 2458 aa3.61□□□□□ -1.83
CHD8-207ENST00000554384 E7ESA3 106 aa3.61□□□□□ -1.83
CHD8-207ENST00000554384 ZNF208O43345 1280 aa3.61□□□□□ -1.83
CHD8-207ENST00000554384 CXCL13O43927 109 aa3.61□□□□□ -1.83
CHD8-207ENST00000554384 PFKFB2O60825 505 aa3.61□□□□□ -1.83
CHD8-207ENST00000554384 IGHV3-48P01763 117 aa3.61□□□□□ -1.83
CHD8-207ENST00000554384 ZNF853P0CG23 659 aa3.61□□□□□ -1.83
CHD8-207ENST00000554384 RNH1P13489 461 aaKnown RBP3.61□□□□□ -1.83
CHD8-207ENST00000554384 IMPDH1P20839 514 aa3.61□□□□□ -1.83
CHD8-207ENST00000554384 ATP6V1B2P21281 511 aa3.61□□□□□ -1.83
CHD8-207ENST00000554384 NMT1P30419 496 aaKnown RBP3.61□□□□□ -1.83
CHD8-207ENST00000554384 NTSP30990 170 aa3.61□□□□□ -1.83
CHD8-207ENST00000554384 AIF1P55008 147 aa3.61□□□□□ -1.83
CHD8-207ENST00000554384 RIPPLY3P57055 190 aa3.61□□□□□ -1.83
CHD8-207ENST00000554384 CCDC173Q0VFZ6 552 aa3.61□□□□□ -1.83
CHD8-207ENST00000554384 GRB7Q14451 532 aa3.61□□□□□ -1.83
CHD8-207ENST00000554384 DMRTC1Q5HYR2 192 aa3.61□□□□□ -1.83
CHD8-207ENST00000554384 OR4F3Q6IEY1 312 aa3.61□□□□□ -1.83
CHD8-207ENST00000554384 UNQ9370/PRO34162Q6UXP9 181 aa3.61□□□□□ -1.83
CHD8-207ENST00000554384 SCARA5Q6ZMJ2 495 aa3.61□□□□□ -1.83
CHD8-207ENST00000554384 SLC35F2Q8IXU6 374 aa3.61□□□□□ -1.83
CHD8-207ENST00000554384 ZCCHC7Q8N3Z6 543 aaKnown RBP3.61□□□□□ -1.83
CHD8-207ENST00000554384 OR5D13Q8NGL4 314 aa3.61□□□□□ -1.83
CHD8-207ENST00000554384 OR8J1Q8NGP2 316 aa3.61□□□□□ -1.83
CHD8-207ENST00000554384 TCTEX1D2Q8WW35 142 aa3.61□□□□□ -1.83
CHD8-207ENST00000554384 RPUSD4Q96CM3 377 aaKnown RBP3.61□□□□□ -1.83
CHD8-207ENST00000554384 MAGEB18Q96M61 343 aa3.61□□□□□ -1.83
CHD8-207ENST00000554384 SLC38A2Q96QD8 506 aa3.61□□□□□ -1.83
CHD8-207ENST00000554384 CCNL2Q96S94 520 aaPredicted RBP3.61□□□□□ -1.83
CHD8-207ENST00000554384 ZNF385DQ9H6B1 395 aa3.61□□□□□ -1.83
CHD8-207ENST00000554384 APMAPQ9HDC9 416 aa3.61□□□□□ -1.83
CHD8-207ENST00000554384 MTCH2Q9Y6C9 303 aa3.61□□□□□ -1.83
CHD8-207ENST00000554384 CHD9Q3L8U1 2897 aa3.61□□□□□ -1.83
CHD8-207ENST00000554384 CROCCQ5TZA2 2017 aa3.61□□□□□ -1.83
CHD8-207ENST00000554384 LRRC37A2A6NM11 1700 aa3.61□□□□□ -1.83
CHD8-207ENST00000554384 LAMB2P55268 1798 aa3.61□□□□□ -1.83
CHD8-207ENST00000554384 FLNBO75369 2602 aaKnown RBP3.6□□□□□ -1.83
CHD8-207ENST00000554384 IGHV7-81A0A0B4J1V7 117 aa3.6□□□□□ -1.83
CHD8-207ENST00000554384 TRDCB7Z8K6 153 aa3.6□□□□□ -1.83
CHD8-207ENST00000554384 SURF6O75683 361 aaKnown RBP3.6□□□□□ -1.83
CHD8-207ENST00000554384 RHOBTB1O94844 696 aa3.6□□□□□ -1.83
CHD8-207ENST00000554384 DIRAS1O95057 198 aa3.6□□□□□ -1.83
CHD8-207ENST00000554384 PTGDSP41222 190 aa3.6□□□□□ -1.83
CHD8-207ENST00000554384 TDO2P48775 406 aa3.6□□□□□ -1.83
CHD8-207ENST00000554384 CAV2P51636 162 aa3.6□□□□□ -1.83
CHD8-207ENST00000554384 KRTAP10-3P60369 221 aa3.6□□□□□ -1.83
CHD8-207ENST00000554384 ZNF45Q02386 682 aa3.6□□□□□ -1.83
CHD8-207ENST00000554384 GANABQ14697 944 aaKnown RBP3.6□□□□□ -1.83
CHD8-207ENST00000554384 NSUN5P1Q3KNT7 163 aa3.6□□□□□ -1.83
CHD8-207ENST00000554384 CFAP221Q4G0U5 840 aa3.6□□□□□ -1.83
CHD8-207ENST00000554384 PDZK1Q5T2W1 519 aa3.6□□□□□ -1.83
CHD8-207ENST00000554384 OR2G6Q5TZ20 316 aa3.6□□□□□ -1.83
CHD8-207ENST00000554384 METTL11BQ5VVY1 283 aa3.6□□□□□ -1.83
CHD8-207ENST00000554384 CENPPQ6IPU0 288 aa3.6□□□□□ -1.83
CHD8-207ENST00000554384 PPP1R27Q86WC6 154 aa3.6□□□□□ -1.83
CHD8-207ENST00000554384 ALLCQ8N6M5 410 aa3.6□□□□□ -1.83
CHD8-207ENST00000554384 BBS1Q8NFJ9 593 aa3.6□□□□□ -1.83
CHD8-207ENST00000554384 CHCHD10Q8WYQ3 142 aaPredicted RBP3.6□□□□□ -1.83
CHD8-207ENST00000554384 ST8SIA1Q92185 356 aa3.6□□□□□ -1.83
CHD8-207ENST00000554384 TIMD4Q96H15 378 aa3.6□□□□□ -1.83
CHD8-207ENST00000554384 NICN1Q9BSH3 213 aa3.6□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms