RNA–Protein interactions for RNA: ENST00000548771.1

CCDC38-206, Transcript of coiled-coil domain containing 38, humanhuman

TSL 3

Gene CCDC38, Length 470 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-206ENST00000548771 ITCHQ96J02 903 aa1.76□□□□□ -2.13
CCDC38-206ENST00000548771 TGM7Q96PF1 710 aa1.76□□□□□ -2.13
CCDC38-206ENST00000548771 RNF2Q99496 336 aa1.76□□□□□ -2.13
CCDC38-206ENST00000548771 CDC42EP4Q9H3Q1 356 aaKnown RBP1.76□□□□□ -2.13
CCDC38-206ENST00000548771 SRMSQ9H3Y6 488 aa1.76□□□□□ -2.13
CCDC38-206ENST00000548771 THUMPD1Q9NXG2 353 aaKnown RBP1.76□□□□□ -2.13
CCDC38-206ENST00000548771 MEMO1Q9Y316 297 aa1.76□□□□□ -2.13
CCDC38-206ENST00000548771 KIF16BQ96L93 1317 aa1.75□□□□□ -2.13
CCDC38-206ENST00000548771 IQANK1A0A1B0GTG1 560 aa1.75□□□□□ -2.13
CCDC38-206ENST00000548771 A8MXQ7 604 aa1.75□□□□□ -2.13
CCDC38-206ENST00000548771 K7EPI3 171 aa1.75□□□□□ -2.13
CCDC38-206ENST00000548771 MED7O43513 233 aa1.75□□□□□ -2.13
CCDC38-206ENST00000548771 TBX19O60806 448 aa1.75□□□□□ -2.13
CCDC38-206ENST00000548771 SMPD2O60906 423 aa1.75□□□□□ -2.13
CCDC38-206ENST00000548771 DIRAS1O95057 198 aa1.75□□□□□ -2.13
CCDC38-206ENST00000548771 IGHG4P01861 327 aa1.75□□□□□ -2.13
CCDC38-206ENST00000548771 HEXBP07686 556 aa1.75□□□□□ -2.13
CCDC38-206ENST00000548771 LAP3P28838 519 aa1.75□□□□□ -2.13
CCDC38-206ENST00000548771 RPL13AP40429 203 aaKnown RBP1.75□□□□□ -2.13
CCDC38-206ENST00000548771 GSSP48637 474 aa1.75□□□□□ -2.13
CCDC38-206ENST00000548771 PPT1P50897 306 aa1.75□□□□□ -2.13
CCDC38-206ENST00000548771 SMARCB1Q12824 385 aa1.75□□□□□ -2.13
CCDC38-206ENST00000548771 GANABQ14697 944 aaKnown RBP1.75□□□□□ -2.13
CCDC38-206ENST00000548771 NADK2Q4G0N4 442 aa1.75□□□□□ -2.13
CCDC38-206ENST00000548771 LY6G6FQ5SQ64 297 aa1.75□□□□□ -2.13
CCDC38-206ENST00000548771 ZNF546Q86UE3 836 aa1.75□□□□□ -2.13
CCDC38-206ENST00000548771 ZNF683Q8IZ20 524 aa1.75□□□□□ -2.13
CCDC38-206ENST00000548771 TTC5Q8N0Z6 440 aa1.75□□□□□ -2.13
CCDC38-206ENST00000548771 TMEM123Q8N131 208 aa1.75□□□□□ -2.13
CCDC38-206ENST00000548771 ARRDC1Q8N5I2 433 aa1.75□□□□□ -2.13
CCDC38-206ENST00000548771 Q8N976 141 aa1.75□□□□□ -2.13
CCDC38-206ENST00000548771 OR10G9Q8NGN4 311 aa1.75□□□□□ -2.13
CCDC38-206ENST00000548771 TRMT10AQ8TBZ6 339 aaKnown RBP1.75□□□□□ -2.13
CCDC38-206ENST00000548771 MCOLN3Q8TDD5 553 aa1.75□□□□□ -2.13
CCDC38-206ENST00000548771 SENP8Q96LD8 212 aa1.75□□□□□ -2.13
CCDC38-206ENST00000548771 TAAR1Q96RJ0 339 aa1.75□□□□□ -2.13
CCDC38-206ENST00000548771 CLCC1Q96S66 551 aa1.75□□□□□ -2.13
CCDC38-206ENST00000548771 SECISBP2Q96T21 854 aaKnown RBP1.75□□□□□ -2.13
CCDC38-206ENST00000548771 TMEM246Q9BRR3 403 aa1.75□□□□□ -2.13
CCDC38-206ENST00000548771 IFI27L2Q9H2X8 130 aa1.75□□□□□ -2.13
CCDC38-206ENST00000548771 NHEJ1Q9H9Q4 299 aaPredicted RBP1.75□□□□□ -2.13
CCDC38-206ENST00000548771 LIN28AQ9H9Z2 209 aaKnown RBP1.75□□□□□ -2.13
CCDC38-206ENST00000548771 RAB18Q9NP72 206 aa1.75□□□□□ -2.13
CCDC38-206ENST00000548771 IL26Q9NPH9 171 aa1.75□□□□□ -2.13
CCDC38-206ENST00000548771 GLRX2Q9NS18 164 aa1.75□□□□□ -2.13
CCDC38-206ENST00000548771 TMOD2Q9NZR1 351 aa1.75□□□□□ -2.13
CCDC38-206ENST00000548771 PCYOX1Q9UHG3 505 aa1.75□□□□□ -2.13
CCDC38-206ENST00000548771 MRPS33Q9Y291 106 aaKnown RBP1.75□□□□□ -2.13
CCDC38-206ENST00000548771 YTHDF2Q9Y5A9 579 aaKnown RBP1.75□□□□□ -2.13
CCDC38-206ENST00000548771 TIMM10BQ9Y5J6 103 aa1.75□□□□□ -2.13
CCDC38-206ENST00000548771 AP1M2Q9Y6Q5 423 aa1.75□□□□□ -2.13
CCDC38-206ENST00000548771 TCRBV9S1A1TA0A576 114 aa1.74□□□□□ -2.13
CCDC38-206ENST00000548771 METTL21EPA6NDL7 271 aa1.74□□□□□ -2.13
CCDC38-206ENST00000548771 C12orf71A8MTZ7 269 aa1.74□□□□□ -2.13
CCDC38-206ENST00000548771 NOL3O60936 208 aaKnown RBP1.74□□□□□ -2.13
CCDC38-206ENST00000548771 PEX11AO75192 247 aa1.74□□□□□ -2.13
CCDC38-206ENST00000548771 SUPT3HO75486 399 aa1.74□□□□□ -2.13
CCDC38-206ENST00000548771 TDGF1P13385 188 aa1.74□□□□□ -2.13
CCDC38-206ENST00000548771 PCMT1P22061 227 aa1.74□□□□□ -2.13
CCDC38-206ENST00000548771 IL12AP29459 219 aa1.74□□□□□ -2.13
CCDC38-206ENST00000548771 ACAA2P42765 397 aaKnown RBP1.74□□□□□ -2.13
CCDC38-206ENST00000548771 CXCL5P42830 114 aa1.74□□□□□ -2.13
CCDC38-206ENST00000548771 UBE2AP49459 152 aa1.74□□□□□ -2.13
CCDC38-206ENST00000548771 TDGF1P3P51864 188 aa1.74□□□□□ -2.13
CCDC38-206ENST00000548771 TNFRSF17Q02223 184 aa1.74□□□□□ -2.13
CCDC38-206ENST00000548771 ACVR1Q04771 509 aa1.74□□□□□ -2.13
CCDC38-206ENST00000548771 REG3AQ06141 175 aa1.74□□□□□ -2.13
CCDC38-206ENST00000548771 ELP6Q0PNE2 266 aa1.74□□□□□ -2.13
CCDC38-206ENST00000548771 C1orf61Q13536 156 aa1.74□□□□□ -2.13
CCDC38-206ENST00000548771 OXA1LQ15070 435 aa1.74□□□□□ -2.13
CCDC38-206ENST00000548771 RSPO1Q2MKA7 263 aaPredicted RBP1.74□□□□□ -2.13
CCDC38-206ENST00000548771 CARD16Q5EG05 197 aa1.74□□□□□ -2.13
CCDC38-206ENST00000548771 DMRTC1Q5HYR2 192 aa1.74□□□□□ -2.13
CCDC38-206ENST00000548771 ANKFN1Q8N957 763 aa1.74□□□□□ -2.13
CCDC38-206ENST00000548771 FNDC5Q8NAU1 212 aa1.74□□□□□ -2.13
CCDC38-206ENST00000548771 IPMKQ8NFU5 416 aa1.74□□□□□ -2.13
CCDC38-206ENST00000548771 OR4F15Q8NGB8 312 aa1.74□□□□□ -2.13
CCDC38-206ENST00000548771 UFD1Q92890 307 aa1.74□□□□□ -2.13
CCDC38-206ENST00000548771 TM4SF19Q96DZ7 209 aa1.74□□□□□ -2.13
CCDC38-206ENST00000548771 NPAS2Q99743 824 aa1.74□□□□□ -2.13
CCDC38-206ENST00000548771 OSBPL11Q9BXB4 747 aa1.74□□□□□ -2.13
CCDC38-206ENST00000548771 DEFB127Q9H1M4 99 aa1.74□□□□□ -2.13
CCDC38-206ENST00000548771 LRRN3Q9H3W5 708 aa1.74□□□□□ -2.13
CCDC38-206ENST00000548771 RANBP3Q9H6Z4 567 aaPredicted RBP1.74□□□□□ -2.13
CCDC38-206ENST00000548771 UFSP2Q9NUQ7 469 aa1.74□□□□□ -2.13
CCDC38-206ENST00000548771 ZNF226Q9NYT6 803 aa1.74□□□□□ -2.13
CCDC38-206ENST00000548771 BFARQ9NZS9 450 aa1.74□□□□□ -2.13
CCDC38-206ENST00000548771 PIPOXQ9P0Z9 390 aa1.74□□□□□ -2.13
CCDC38-206ENST00000548771 CLCF1Q9UBD9 225 aa1.74□□□□□ -2.13
CCDC38-206ENST00000548771 SNX6Q9UNH7 406 aa1.74□□□□□ -2.13
CCDC38-206ENST00000548771 SHROOM3Q8TF72 1996 aa1.73□□□□□ -2.13
CCDC38-206ENST00000548771 MBLAC1A4D2B0 266 aaPredicted RBP1.73□□□□□ -2.13
CCDC38-206ENST00000548771 C12orf77C9JDV5 145 aa1.73□□□□□ -2.13
CCDC38-206ENST00000548771 K7EQM0 130 aa1.73□□□□□ -2.13
CCDC38-206ENST00000548771 PRRG1O14668 218 aa1.73□□□□□ -2.13
CCDC38-206ENST00000548771 SCGNO76038 276 aa1.73□□□□□ -2.13
CCDC38-206ENST00000548771 ALDOBP05062 364 aa1.73□□□□□ -2.13
CCDC38-206ENST00000548771 KRT8P05787 483 aa1.73□□□□□ -2.13
CCDC38-206ENST00000548771 RHOXF2BP0C7M4 288 aa1.73□□□□□ -2.13
CCDC38-206ENST00000548771 CISD3P0C7P0 127 aa1.73□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms