RNA–Protein interactions for RNA: ENST00000544550.5

SNHG1-220, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 636 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-220ENST00000544550 GRID1Q9ULK0 1009 aa3.48□□□□□ -1.85
SNHG1-220ENST00000544550 C19orf53Q9UNZ5 99 aaPredicted RBP3.48□□□□□ -1.85
SNHG1-220ENST00000544550 SLC12A4Q9UP95 1085 aa3.48□□□□□ -1.85
SNHG1-220ENST00000544550 SLC9A8Q9Y2E8 581 aa3.48□□□□□ -1.85
SNHG1-220ENST00000544550 CMAHPQ9Y471 501 aa3.48□□□□□ -1.85
SNHG1-220ENST00000544550 SPIN1Q9Y657 262 aaPredicted RBP3.48□□□□□ -1.85
SNHG1-220ENST00000544550 YLPM1P49750 1951 aaKnown RBP3.48□□□□□ -1.85
SNHG1-220ENST00000544550 NINQ8N4C6 2090 aa3.48□□□□□ -1.85
SNHG1-220ENST00000544550 MALRD1Q5VYJ5 2156 aa3.48□□□□□ -1.85
SNHG1-220ENST00000544550 ARPC4-TTLL3A0A0A6YYG9 625 aa3.47□□□□□ -1.85
SNHG1-220ENST00000544550 TMEM129A0AVI4 362 aa3.47□□□□□ -1.85
SNHG1-220ENST00000544550 AGAP5A6NIR3 686 aa3.47□□□□□ -1.85
SNHG1-220ENST00000544550 OR6C65A6NJZ3 312 aa3.47□□□□□ -1.85
SNHG1-220ENST00000544550 ZNF716A6NP11 495 aa3.47□□□□□ -1.85
SNHG1-220ENST00000544550 CLDN25C9JDP6 229 aa3.47□□□□□ -1.85
SNHG1-220ENST00000544550 CCDC188H7C350 402 aa3.47□□□□□ -1.85
SNHG1-220ENST00000544550 UBXN8O00124 270 aa3.47□□□□□ -1.85
SNHG1-220ENST00000544550 RAB27BO00194 218 aa3.47□□□□□ -1.85
SNHG1-220ENST00000544550 UPK1AO00322 258 aa3.47□□□□□ -1.85
SNHG1-220ENST00000544550 KLF11O14901 512 aa3.47□□□□□ -1.85
SNHG1-220ENST00000544550 WNT9BO14905 357 aa3.47□□□□□ -1.85
SNHG1-220ENST00000544550 PIP5K1CO60331 668 aa3.47□□□□□ -1.85
SNHG1-220ENST00000544550 FAM20BO75063 409 aa3.47□□□□□ -1.85
SNHG1-220ENST00000544550 NME6O75414 186 aaPredicted RBP3.47□□□□□ -1.85
SNHG1-220ENST00000544550 FOXH1O75593 365 aa3.47□□□□□ -1.85
SNHG1-220ENST00000544550 KRT33AO76009 404 aa3.47□□□□□ -1.85
SNHG1-220ENST00000544550 CLPXO76031 633 aa3.47□□□□□ -1.85
SNHG1-220ENST00000544550 PSMG1O95456 288 aa3.47□□□□□ -1.85
SNHG1-220ENST00000544550 PMS2P2O95744 297 aa3.47□□□□□ -1.85
SNHG1-220ENST00000544550 IGKV3-15P01624 115 aa3.47□□□□□ -1.85
SNHG1-220ENST00000544550 IGLV1-44P01699 117 aa3.47□□□□□ -1.85
SNHG1-220ENST00000544550 IGHV2-5P01817 119 aa3.47□□□□□ -1.85
SNHG1-220ENST00000544550 OPN1MWP04001 364 aa3.47□□□□□ -1.85
SNHG1-220ENST00000544550 OPN1MW2P0DN77 364 aa3.47□□□□□ -1.85
SNHG1-220ENST00000544550 OPN1MW3P0DN78 364 aa3.47□□□□□ -1.85
SNHG1-220ENST00000544550 GFAPP14136 432 aa3.47□□□□□ -1.85
SNHG1-220ENST00000544550 NR4A1P22736 598 aa3.47□□□□□ -1.85
SNHG1-220ENST00000544550 PPIFP30405 207 aaKnown RBP3.47□□□□□ -1.85
SNHG1-220ENST00000544550 NTSP30990 170 aa3.47□□□□□ -1.85
SNHG1-220ENST00000544550 RAD52P43351 418 aa3.47□□□□□ -1.85
SNHG1-220ENST00000544550 DIO1P49895 249 aa3.47□□□□□ -1.85
SNHG1-220ENST00000544550 CCNG1P51959 295 aa3.47□□□□□ -1.85
SNHG1-220ENST00000544550 NCBP2P52298 156 aaKnown RBP eCLIP3.47□□□□□ -1.85
SNHG1-220ENST00000544550 ALDH18A1P54886 795 aaKnown RBP3.47□□□□□ -1.85
SNHG1-220ENST00000544550 RPS23P62266 143 aaKnown RBP3.47□□□□□ -1.85
SNHG1-220ENST00000544550 ZNF117Q03924 483 aa3.47□□□□□ -1.85
SNHG1-220ENST00000544550 GALNT1Q10472 559 aaPredicted RBP3.47□□□□□ -1.85
SNHG1-220ENST00000544550 TBX2Q13207 712 aaPredicted RBP3.47□□□□□ -1.85
SNHG1-220ENST00000544550 GTF2H2Q13888 395 aa3.47□□□□□ -1.85
SNHG1-220ENST00000544550 CBFBQ13951 182 aa3.47□□□□□ -1.85
SNHG1-220ENST00000544550 TBRG1Q3YBR2 411 aa3.47□□□□□ -1.85
SNHG1-220ENST00000544550 SPDYE7PQ495Y7 208 aa3.47□□□□□ -1.85
SNHG1-220ENST00000544550 CD300EQ496F6 205 aaPredicted RBP3.47□□□□□ -1.85
SNHG1-220ENST00000544550 GGTA1PQ4G0N0 100 aa3.47□□□□□ -1.85
SNHG1-220ENST00000544550 KLHL22Q53GT1 634 aa3.47□□□□□ -1.85
SNHG1-220ENST00000544550 SLC25A53Q5H9E4 307 aa3.47□□□□□ -1.85
SNHG1-220ENST00000544550 RNASEH2BQ5TBB1 312 aaKnown RBP3.47□□□□□ -1.85
SNHG1-220ENST00000544550 STEAP4Q687X5 459 aa3.47□□□□□ -1.85
SNHG1-220ENST00000544550 SFRP4Q6FHJ7 346 aaPredicted RBP3.47□□□□□ -1.85
SNHG1-220ENST00000544550 GTF2H2CQ6P1K8 395 aa3.47□□□□□ -1.85
SNHG1-220ENST00000544550 ANKRD16Q6P6B7 361 aa3.47□□□□□ -1.85
SNHG1-220ENST00000544550 TMEM107Q6UX40 140 aa3.47□□□□□ -1.85
SNHG1-220ENST00000544550 C9orf139Q6ZV77 190 aa3.47□□□□□ -1.85
SNHG1-220ENST00000544550 KCTD20Q7Z5Y7 419 aa3.47□□□□□ -1.85
SNHG1-220ENST00000544550 CARM1Q86X55 608 aa3.47□□□□□ -1.85
SNHG1-220ENST00000544550 WDFY1Q8IWB7 410 aa3.47□□□□□ -1.85
SNHG1-220ENST00000544550 ADGRG5Q8IZF4 528 aa3.47□□□□□ -1.85
SNHG1-220ENST00000544550 PDIK1LQ8N165 341 aa3.47□□□□□ -1.85
SNHG1-220ENST00000544550 CDRT4Q8N9R6 151 aa3.47□□□□□ -1.85
SNHG1-220ENST00000544550 GATSQ8NAP1 163 aa3.47□□□□□ -1.85
SNHG1-220ENST00000544550 OR52E4Q8NGH9 312 aa3.47□□□□□ -1.85
SNHG1-220ENST00000544550 OR4C3Q8NH37 302 aa3.47□□□□□ -1.85
SNHG1-220ENST00000544550 MAGEE2Q8TD90 523 aaPredicted RBP3.47□□□□□ -1.85
SNHG1-220ENST00000544550 TMEM234Q8WY98 164 aa3.47□□□□□ -1.85
SNHG1-220ENST00000544550 CDKL2Q92772 493 aa3.47□□□□□ -1.85
SNHG1-220ENST00000544550 TRIM44Q96DX7 344 aaPredicted RBP3.47□□□□□ -1.85
SNHG1-220ENST00000544550 CFAP36Q96G28 342 aa3.47□□□□□ -1.85
SNHG1-220ENST00000544550 UBXN10Q96LJ8 280 aa3.47□□□□□ -1.85
SNHG1-220ENST00000544550 ZNF48Q96MX3 618 aaPredicted RBP3.47□□□□□ -1.85
SNHG1-220ENST00000544550 ATOH8Q96SQ7 321 aa3.47□□□□□ -1.85
SNHG1-220ENST00000544550 OSBPL9Q96SU4 736 aa3.47□□□□□ -1.85
SNHG1-220ENST00000544550 PTDSS2Q9BVG9 487 aa3.47□□□□□ -1.85
SNHG1-220ENST00000544550 HOXD1Q9GZZ0 328 aa3.47□□□□□ -1.85
SNHG1-220ENST00000544550 SERHL2Q9H4I8 314 aa3.47□□□□□ -1.85
SNHG1-220ENST00000544550 ZNF69Q9UC07 566 aa3.47□□□□□ -1.85
SNHG1-220ENST00000544550 ZNF346Q9UL40 294 aaKnown RBP3.47□□□□□ -1.85
SNHG1-220ENST00000544550 ICAM5Q9UMF0 924 aa3.47□□□□□ -1.85
SNHG1-220ENST00000544550 REXO2Q9Y3B8 237 aaKnown RBP3.47□□□□□ -1.85
SNHG1-220ENST00000544550 RNF11Q9Y3C5 154 aa3.47□□□□□ -1.85
SNHG1-220ENST00000544550 AUP1Q9Y679 476 aa3.47□□□□□ -1.85
SNHG1-220ENST00000544550 EXPH5Q8NEV8 1989 aa3.46□□□□□ -1.86
SNHG1-220ENST00000544550 GNG14A0A1W2PPG7 69 aa3.46□□□□□ -1.86
SNHG1-220ENST00000544550 GXYLT2A0PJZ3 443 aa3.46□□□□□ -1.86
SNHG1-220ENST00000544550 AQP7P3A6NL99 342 aa3.46□□□□□ -1.86
SNHG1-220ENST00000544550 MYO1GB0I1T2 1018 aa3.46□□□□□ -1.86
SNHG1-220ENST00000544550 HMGB1P1B2RPK0 211 aaPredicted RBP3.46□□□□□ -1.86
SNHG1-220ENST00000544550 SRRM5B3KS81 715 aa3.46□□□□□ -1.86
SNHG1-220ENST00000544550 ZNF587BE7ETH6 402 aa3.46□□□□□ -1.86
SNHG1-220ENST00000544550 F5H697 171 aa3.46□□□□□ -1.86
SNHG1-220ENST00000544550 GTPBP1O00178 669 aaKnown RBP3.46□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms