RNA–Protein interactions for RNA: ENST00000542714.5

CHFR-221, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 4

Gene CHFR, Length 542 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-221ENST00000542714 STSP08842 583 aa11.89□□□□□ -0.51
CHFR-221ENST00000542714 HLA-DOBP13765 273 aa11.89□□□□□ -0.51
CHFR-221ENST00000542714 ZNF3P17036 446 aa11.89□□□□□ -0.51
CHFR-221ENST00000542714 GTF2E2P29084 291 aaKnown RBP11.89□□□□□ -0.51
CHFR-221ENST00000542714 PLA2G5P39877 138 aa11.89□□□□□ -0.51
CHFR-221ENST00000542714 CDKN2AP42771 156 aaKnown RBP11.89□□□□□ -0.51
CHFR-221ENST00000542714 MAP2K4P45985 399 aa11.89□□□□□ -0.51
CHFR-221ENST00000542714 STARP49675 285 aa11.89□□□□□ -0.51
CHFR-221ENST00000542714 NR1H2P55055 460 aa11.89□□□□□ -0.51
CHFR-221ENST00000542714 CDH11P55287 796 aa11.89□□□□□ -0.51
CHFR-221ENST00000542714 CLDN20P56880 219 aa11.89□□□□□ -0.51
CHFR-221ENST00000542714 PMP22Q01453 160 aa11.89□□□□□ -0.51
CHFR-221ENST00000542714 PUDPQ08623 228 aa11.89□□□□□ -0.51
CHFR-221ENST00000542714 KRR1Q13601 381 aaKnown RBP11.89□□□□□ -0.51
CHFR-221ENST00000542714 IRF3Q14653 427 aa11.89□□□□□ -0.51
CHFR-221ENST00000542714 ACKR1Q16570 336 aa11.89□□□□□ -0.51
CHFR-221ENST00000542714 XAF1Q6GPH4 301 aa11.89□□□□□ -0.51
CHFR-221ENST00000542714 IGFL3Q6UXB1 125 aa11.89□□□□□ -0.51
CHFR-221ENST00000542714 KCTD8Q6ZWB6 473 aa11.89□□□□□ -0.51
CHFR-221ENST00000542714 TRILQ7L0X0 811 aa11.89□□□□□ -0.51
CHFR-221ENST00000542714 PRSS48Q7RTY5 328 aa11.89□□□□□ -0.51
CHFR-221ENST00000542714 WDFY1Q8IWB7 410 aa11.89□□□□□ -0.51
CHFR-221ENST00000542714 KDM8Q8N371 416 aa11.89□□□□□ -0.51
CHFR-221ENST00000542714 EXD3Q8N9H8 876 aa11.89□□□□□ -0.51
CHFR-221ENST00000542714 FAM98AQ8NCA5 519 aaKnown RBP11.89□□□□□ -0.51
CHFR-221ENST00000542714 SMPDL3BQ92485 455 aa11.89□□□□□ -0.51
CHFR-221ENST00000542714 KISS1RQ969F8 398 aaPredicted RBP11.89□□□□□ -0.51
CHFR-221ENST00000542714 LGALS12Q96DT0 336 aa11.89□□□□□ -0.51
CHFR-221ENST00000542714 DTNBP1Q96EV8 351 aa11.89□□□□□ -0.51
CHFR-221ENST00000542714 ADGRG7Q96K78 797 aa11.89□□□□□ -0.51
CHFR-221ENST00000542714 SLC6A15Q9H2J7 730 aa11.89□□□□□ -0.51
CHFR-221ENST00000542714 CCNB1IP1Q9NPC3 277 aa11.89□□□□□ -0.51
CHFR-221ENST00000542714 MRPS18AQ9NVS2 196 aaKnown RBP11.89□□□□□ -0.51
CHFR-221ENST00000542714 B3GAT1Q9P2W7 334 aa11.89□□□□□ -0.51
CHFR-221ENST00000542714 B3GALT5Q9Y2C3 310 aa11.89□□□□□ -0.51
CHFR-221ENST00000542714 RPL36Q9Y3U8 105 aaKnown RBP11.89□□□□□ -0.51
CHFR-221ENST00000542714 OR6C68A6NDL8 312 aa11.88□□□□□ -0.51
CHFR-221ENST00000542714 PRR23D1E9PI22 279 aaPredicted RBP11.88□□□□□ -0.51
CHFR-221ENST00000542714 K7EM74 188 aa11.88□□□□□ -0.51
CHFR-221ENST00000542714 K7ENP7 123 aa11.88□□□□□ -0.51
CHFR-221ENST00000542714 SULT2B1O00204 365 aa11.88□□□□□ -0.51
CHFR-221ENST00000542714 TNFSF11O14788 317 aa11.88□□□□□ -0.51
CHFR-221ENST00000542714 SERPINI2O75830 405 aa11.88□□□□□ -0.51
CHFR-221ENST00000542714 OR6A2O95222 327 aa11.88□□□□□ -0.51
CHFR-221ENST00000542714 PRR23D2P0DMB1 279 aaPredicted RBP11.88□□□□□ -0.51
CHFR-221ENST00000542714 CLUP10909 449 aa11.88□□□□□ -0.51
CHFR-221ENST00000542714 JUNBP17275 347 aaPredicted RBP11.88□□□□□ -0.51
CHFR-221ENST00000542714 AHCYP23526 432 aa11.88□□□□□ -0.51
CHFR-221ENST00000542714 ACVR2AP27037 513 aa11.88□□□□□ -0.51
CHFR-221ENST00000542714 C21orf33P30042 268 aaPredicted RBP11.88□□□□□ -0.51
CHFR-221ENST00000542714 HTR1FP30939 366 aa11.88□□□□□ -0.51
CHFR-221ENST00000542714 RPL5P46777 297 aaKnown RBP11.88□□□□□ -0.51
CHFR-221ENST00000542714 SUCLG1P53597 346 aaKnown RBP11.88□□□□□ -0.51
CHFR-221ENST00000542714 CLDN15P56746 228 aa11.88□□□□□ -0.51
CHFR-221ENST00000542714 RPL27P61353 136 aaKnown RBP11.88□□□□□ -0.51
CHFR-221ENST00000542714 PPIAP62937 165 aaKnown RBP11.88□□□□□ -0.51
CHFR-221ENST00000542714 SLC35A1P78382 337 aa11.88□□□□□ -0.51
CHFR-221ENST00000542714 ST3GAL4Q11206 333 aa11.88□□□□□ -0.51
CHFR-221ENST00000542714 NADK2Q4G0N4 442 aa11.88□□□□□ -0.51
CHFR-221ENST00000542714 EMC4Q5J8M3 183 aa11.88□□□□□ -0.51
CHFR-221ENST00000542714 GPR139Q6DWJ6 353 aa11.88□□□□□ -0.51
CHFR-221ENST00000542714 LEG1Q6P5S2 330 aa11.88□□□□□ -0.51
CHFR-221ENST00000542714 INO80CQ6PI98 192 aaPredicted RBP11.88□□□□□ -0.51
CHFR-221ENST00000542714 MEPCEQ7L2J0 689 aaKnown RBP11.88□□□□□ -0.51
CHFR-221ENST00000542714 GID4Q8IVV7 300 aa11.88□□□□□ -0.51
CHFR-221ENST00000542714 GHDCQ8N2G8 530 aa11.88□□□□□ -0.51
CHFR-221ENST00000542714 ARIH2OSQ8N7S6 290 aa11.88□□□□□ -0.51
CHFR-221ENST00000542714 OR52I1Q8NGK6 324 aa11.88□□□□□ -0.51
CHFR-221ENST00000542714 OR9Q1Q8NGQ5 310 aa11.88□□□□□ -0.51
CHFR-221ENST00000542714 ZNRF4Q8WWF5 429 aa11.88□□□□□ -0.51
CHFR-221ENST00000542714 MYDGFQ969H8 173 aa11.88□□□□□ -0.51
CHFR-221ENST00000542714 FAM122AQ96E09 287 aa11.88□□□□□ -0.51
CHFR-221ENST00000542714 RNFT2Q96EX2 444 aa11.88□□□□□ -0.51
CHFR-221ENST00000542714 NMNAT3Q96T66 252 aa11.88□□□□□ -0.51
CHFR-221ENST00000542714 MFRPQ9BY79 579 aa11.88□□□□□ -0.51
CHFR-221ENST00000542714 SRXN1Q9BYN0 137 aa11.88□□□□□ -0.51
CHFR-221ENST00000542714 CCDC90BQ9GZT6 254 aa11.88□□□□□ -0.51
CHFR-221ENST00000542714 TXNIPQ9H3M7 391 aa11.88□□□□□ -0.51
CHFR-221ENST00000542714 QPCTLQ9NXS2 382 aa11.88□□□□□ -0.51
CHFR-221ENST00000542714 TAS2R16Q9NYV7 291 aa11.88□□□□□ -0.51
CHFR-221ENST00000542714 RAXQ9Y2V3 346 aa11.88□□□□□ -0.51
CHFR-221ENST00000542714 LIPGQ9Y5X9 500 aa11.88□□□□□ -0.51
CHFR-221ENST00000542714 TRAV17A0A0B4J275 112 aa11.87□□□□□ -0.51
CHFR-221ENST00000542714 AQP7P3A6NL99 342 aa11.87□□□□□ -0.51
CHFR-221ENST00000542714 GJE1A6NN92 205 aa11.87□□□□□ -0.51
CHFR-221ENST00000542714 H7C1C5 153 aa11.87□□□□□ -0.51
CHFR-221ENST00000542714 APOL3O95236 402 aa11.87□□□□□ -0.51
CHFR-221ENST00000542714 ITGB2P05107 769 aa11.87□□□□□ -0.51
CHFR-221ENST00000542714 GYPBP06028 91 aa11.87□□□□□ -0.51
CHFR-221ENST00000542714 POU3F2P20265 443 aaPredicted RBP11.87□□□□□ -0.51
CHFR-221ENST00000542714 LHX2P50458 406 aa11.87□□□□□ -0.51
CHFR-221ENST00000542714 LCN6P62502 163 aa11.87□□□□□ -0.51
CHFR-221ENST00000542714 H3F3AP84243 136 aa11.87□□□□□ -0.51
CHFR-221ENST00000542714 HSF1Q00613 529 aa11.87□□□□□ -0.51
CHFR-221ENST00000542714 EMX1Q04741 257 aaPredicted RBP11.87□□□□□ -0.51
CHFR-221ENST00000542714 MELKQ14680 651 aa11.87□□□□□ -0.51
CHFR-221ENST00000542714 NEDD8Q15843 81 aa11.87□□□□□ -0.51
CHFR-221ENST00000542714 ARMC4Q5T2S8 1044 aa11.87□□□□□ -0.51
CHFR-221ENST00000542714 GTF2IRD2BQ6EKJ0 949 aa11.87□□□□□ -0.51
CHFR-221ENST00000542714 PAQR6Q6TCH4 344 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms