RNA–Protein interactions for RNA: ENST00000540784.5

DDB1-218, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 3

Gene DDB1, Length 1,119 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-218ENST00000540784 OR10H3O60404 316 aa13.74□□□□□ -0.21
DDB1-218ENST00000540784 HPRP00739 348 aa13.74□□□□□ -0.21
DDB1-218ENST00000540784 GPR4P46093 362 aa13.74□□□□□ -0.21
DDB1-218ENST00000540784 CLDN17P56750 224 aa13.74□□□□□ -0.21
DDB1-218ENST00000540784 TFF3Q07654 80 aa13.74□□□□□ -0.21
DDB1-218ENST00000540784 SP5Q6BEB4 398 aaPredicted RBP13.74□□□□□ -0.21
DDB1-218ENST00000540784 CASP12Q6UXS9 341 aa13.74□□□□□ -0.21
DDB1-218ENST00000540784 KIF18BQ86Y91 864 aa13.74□□□□□ -0.21
DDB1-218ENST00000540784 C10orf67Q8IYJ2 551 aa13.74□□□□□ -0.21
DDB1-218ENST00000540784 LINC00471Q8N535 108 aa13.74□□□□□ -0.21
DDB1-218ENST00000540784 ANKK1Q8NFD2 765 aa13.74□□□□□ -0.21
DDB1-218ENST00000540784 OR51A7Q8NH64 312 aa13.74□□□□□ -0.21
DDB1-218ENST00000540784 TMEM45BQ96B21 275 aa13.74□□□□□ -0.21
DDB1-218ENST00000540784 FAM46AQ96IP4 442 aaKnown RBP13.74□□□□□ -0.21
DDB1-218ENST00000540784 ZNF385AQ96PM9 386 aaKnown RBP13.74□□□□□ -0.21
DDB1-218ENST00000540784 TNFRSF13CQ96RJ3 184 aa13.74□□□□□ -0.21
DDB1-218ENST00000540784 B3GAT1Q9P2W7 334 aa13.74□□□□□ -0.21
DDB1-218ENST00000540784 SAMHD1Q9Y3Z3 626 aaKnown RBP13.74□□□□□ -0.21
DDB1-218ENST00000540784 LYVE1Q9Y5Y7 322 aa13.74□□□□□ -0.21
DDB1-218ENST00000540784 USP9XQ93008 2570 aaPredicted RBP13.74□□□□□ -0.21
DDB1-218ENST00000540784 CCNB2O95067 398 aa13.73□□□□□ -0.21
DDB1-218ENST00000540784 HLA-DOBP13765 273 aa13.73□□□□□ -0.21
DDB1-218ENST00000540784 AQP2P41181 271 aa13.73□□□□□ -0.21
DDB1-218ENST00000540784 OMPP47874 163 aa13.73□□□□□ -0.21
DDB1-218ENST00000540784 LIMS1P48059 325 aa13.73□□□□□ -0.21
DDB1-218ENST00000540784 SLC9A3P48764 834 aa13.73□□□□□ -0.21
DDB1-218ENST00000540784 ANKDD1AQ495B1 522 aa13.73□□□□□ -0.21
DDB1-218ENST00000540784 TFAP2EQ6VUC0 442 aa13.73□□□□□ -0.21
DDB1-218ENST00000540784 ZC3HAV1Q7Z2W4 902 aaKnown RBP13.73□□□□□ -0.21
DDB1-218ENST00000540784 ZER1Q7Z7L7 766 aa13.73□□□□□ -0.21
DDB1-218ENST00000540784 UBE2J2Q8N2K1 259 aa13.73□□□□□ -0.21
DDB1-218ENST00000540784 OR4C15Q8NGM1 316 aa13.73□□□□□ -0.21
DDB1-218ENST00000540784 GNPDA2Q8TDQ7 276 aa13.73□□□□□ -0.21
DDB1-218ENST00000540784 DUS3LQ96G46 650 aaKnown RBP13.73□□□□□ -0.21
DDB1-218ENST00000540784 DNAJB9Q9UBS3 223 aa13.73□□□□□ -0.21
DDB1-218ENST00000540784 PRSS50Q9UI38 385 aa13.73□□□□□ -0.21
DDB1-218ENST00000540784 AP4S1Q9Y587 144 aa13.73□□□□□ -0.21
DDB1-218ENST00000540784 U3KQV3 271 aa13.73□□□□□ -0.21
DDB1-218ENST00000540784 ZNF726A6NNF4 738 aa13.72□□□□□ -0.21
DDB1-218ENST00000540784 CLOCKO15516 846 aa13.72□□□□□ -0.21
DDB1-218ENST00000540784 HNRNPRO43390 633 aaKnown RBP13.72□□□□□ -0.21
DDB1-218ENST00000540784 AKAP8O43823 692 aaKnown RBP13.72□□□□□ -0.21
DDB1-218ENST00000540784 SERPINI2O75830 405 aa13.72□□□□□ -0.21
DDB1-218ENST00000540784 CNOT4O95628 575 aaKnown RBP13.72□□□□□ -0.21
DDB1-218ENST00000540784 POU2F1P14859 743 aa13.72□□□□□ -0.21
DDB1-218ENST00000540784 GRNP28799 593 aaKnown RBP13.72□□□□□ -0.21
DDB1-218ENST00000540784 CD79BP40259 229 aa13.72□□□□□ -0.21
DDB1-218ENST00000540784 ACTR3P61158 418 aa13.72□□□□□ -0.21
DDB1-218ENST00000540784 POU3F1Q03052 451 aaPredicted RBP13.72□□□□□ -0.21
DDB1-218ENST00000540784 RPL18Q07020 188 aaKnown RBP13.72□□□□□ -0.21
DDB1-218ENST00000540784 FAM27E3Q08E93 113 aa13.72□□□□□ -0.21
DDB1-218ENST00000540784 PPP1R8Q12972 351 aaKnown RBP13.72□□□□□ -0.21
DDB1-218ENST00000540784 GK3PQ14409 553 aa13.72□□□□□ -0.21
DDB1-218ENST00000540784 KPNB1Q14974 876 aaKnown RBP13.72□□□□□ -0.21
DDB1-218ENST00000540784 TAF11Q15544 211 aa13.72□□□□□ -0.21
DDB1-218ENST00000540784 MICAQ29983 383 aa13.72□□□□□ -0.21
DDB1-218ENST00000540784 ZBED5Q49AG3 693 aa13.72□□□□□ -0.21
DDB1-218ENST00000540784 FBXW9Q5XUX1 488 aa13.72□□□□□ -0.21
DDB1-218ENST00000540784 NIPAL3Q6P499 406 aa13.72□□□□□ -0.21
DDB1-218ENST00000540784 NHLRC1Q6VVB1 395 aa13.72□□□□□ -0.21
DDB1-218ENST00000540784 MOSPD2Q8NHP6 518 aa13.72□□□□□ -0.21
DDB1-218ENST00000540784 TXNDC15Q96J42 360 aa13.72□□□□□ -0.21
DDB1-218ENST00000540784 NPDC1Q9NQX5 325 aaPredicted RBP13.72□□□□□ -0.21
DDB1-218ENST00000540784 INIPQ9NRY2 104 aa13.72□□□□□ -0.21
DDB1-218ENST00000540784 ARMC1Q9NVT9 282 aa13.72□□□□□ -0.21
DDB1-218ENST00000540784 GALNT8Q9NY28 637 aa13.72□□□□□ -0.21
DDB1-218ENST00000540784 UPB1Q9UBR1 384 aa13.72□□□□□ -0.21
DDB1-218ENST00000540784 PLEKHB1Q9UF11 243 aaPredicted RBP13.72□□□□□ -0.21
DDB1-218ENST00000540784 HIF3AQ9Y2N7 669 aa13.72□□□□□ -0.21
DDB1-218ENST00000540784 A0A1W2PRG6 482 aa13.71□□□□□ -0.21
DDB1-218ENST00000540784 UNC119BA6NIH7 251 aa13.71□□□□□ -0.21
DDB1-218ENST00000540784 OR6C65A6NJZ3 312 aa13.71□□□□□ -0.21
DDB1-218ENST00000540784 C16orf97H3BN30 126 aa13.71□□□□□ -0.21
DDB1-218ENST00000540784 C19orf84I3L1E1 186 aa13.71□□□□□ -0.21
DDB1-218ENST00000540784 CDC42EP2O14613 210 aa13.71□□□□□ -0.21
DDB1-218ENST00000540784 TRAF3IP2O43734 574 aaPredicted RBP13.71□□□□□ -0.21
DDB1-218ENST00000540784 PTP4A3O75365 173 aa13.71□□□□□ -0.21
DDB1-218ENST00000540784 TIPRLO75663 272 aa13.71□□□□□ -0.21
DDB1-218ENST00000540784 KRT33AO76009 404 aa13.71□□□□□ -0.21
DDB1-218ENST00000540784 ADAP00813 363 aa13.71□□□□□ -0.21
DDB1-218ENST00000540784 IGHV3-9P01782 118 aa13.71□□□□□ -0.21
DDB1-218ENST00000540784 F13BP05160 661 aa13.71□□□□□ -0.21
DDB1-218ENST00000540784 TSPAN19P0C672 248 aa13.71□□□□□ -0.21
DDB1-218ENST00000540784 IFNGR1P15260 489 aa13.71□□□□□ -0.21
DDB1-218ENST00000540784 EDNRAP25101 427 aa13.71□□□□□ -0.21
DDB1-218ENST00000540784 DNAJA1P31689 397 aaKnown RBP13.71□□□□□ -0.21
DDB1-218ENST00000540784 PCYT1AP49585 367 aa13.71□□□□□ -0.21
DDB1-218ENST00000540784 SELENOPP49908 381 aa13.71□□□□□ -0.21
DDB1-218ENST00000540784 P2RY6Q15077 328 aa13.71□□□□□ -0.21
DDB1-218ENST00000540784 ALG10Q5BKT4 473 aa13.71□□□□□ -0.21
DDB1-218ENST00000540784 C1orf94Q6P1W5 598 aa13.71□□□□□ -0.21
DDB1-218ENST00000540784 Q6ZT83 130 aa13.71□□□□□ -0.21
DDB1-218ENST00000540784 SLC35D2Q76EJ3 337 aa13.71□□□□□ -0.21
DDB1-218ENST00000540784 PIAS4Q8N2W9 510 aaPredicted RBP13.71□□□□□ -0.21
DDB1-218ENST00000540784 OR13C2Q8NGS9 318 aa13.71□□□□□ -0.21
DDB1-218ENST00000540784 EMC6Q9BV81 110 aa13.71□□□□□ -0.21
DDB1-218ENST00000540784 HDHD5Q9BXW7 423 aa13.71□□□□□ -0.21
DDB1-218ENST00000540784 VNN3Q9NY84 501 aa13.71□□□□□ -0.21
DDB1-218ENST00000540784 RCE1Q9Y256 329 aa13.71□□□□□ -0.21
DDB1-218ENST00000540784 MPDZO75970 2070 aa13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms