RNA–Protein interactions for RNA: ENST00000540128.1

TRIM65-202, Transcript of tripartite motif containing 65, humanhuman

TSL 3

Gene TRIM65, Length 886 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM65-202ENST00000540128 MAGEA2P43356 314 aa19.5■□□□□ 0.71
TRIM65-202ENST00000540128 SMIM11AP58511 58 aa19.5■□□□□ 0.71
TRIM65-202ENST00000540128 ITGADQ13349 1161 aa19.5■□□□□ 0.71
TRIM65-202ENST00000540128 C1DQ13901 141 aaKnown RBP19.5■□□□□ 0.71
TRIM65-202ENST00000540128 CASP12Q6UXS9 341 aa19.5■□□□□ 0.71
TRIM65-202ENST00000540128 MBOAT2Q6ZWT7 520 aa19.5■□□□□ 0.71
TRIM65-202ENST00000540128 ZC3HAV1Q7Z2W4 902 aaKnown RBP19.5■□□□□ 0.71
TRIM65-202ENST00000540128 CXorf67Q86X51 503 aaPredicted RBP19.5■□□□□ 0.71
TRIM65-202ENST00000540128 UEVLDQ8IX04 471 aa19.5■□□□□ 0.71
TRIM65-202ENST00000540128 NRMQ8IXM6 262 aa19.5■□□□□ 0.71
TRIM65-202ENST00000540128 WFIKKN1Q96NZ8 548 aa19.5■□□□□ 0.71
TRIM65-202ENST00000540128 ZNF347Q96SE7 839 aa19.5■□□□□ 0.71
TRIM65-202ENST00000540128 USB1Q9BQ65 265 aaKnown RBP19.5■□□□□ 0.71
TRIM65-202ENST00000540128 TESMINQ9Y4I5 508 aa19.5■□□□□ 0.71
TRIM65-202ENST00000540128 ABCA4P78363 2273 aa19.49■□□□□ 0.71
TRIM65-202ENST00000540128 AQP12BA6NM10 295 aa19.49■□□□□ 0.71
TRIM65-202ENST00000540128 PDLIM1O00151 329 aa19.49■□□□□ 0.71
TRIM65-202ENST00000540128 DIRAS1O95057 198 aa19.49■□□□□ 0.71
TRIM65-202ENST00000540128 COX5AP20674 150 aa19.49■□□□□ 0.71
TRIM65-202ENST00000540128 IGHV1-2P23083 117 aa19.49■□□□□ 0.71
TRIM65-202ENST00000540128 FOXD4Q12950 439 aaPredicted RBP19.49■□□□□ 0.71
TRIM65-202ENST00000540128 PODNL1Q6PEZ8 512 aa19.49■□□□□ 0.71
TRIM65-202ENST00000540128 ZNF730Q6ZMV8 503 aa19.49■□□□□ 0.71
TRIM65-202ENST00000540128 ZDHHC21Q8IVQ6 265 aa19.49■□□□□ 0.71
TRIM65-202ENST00000540128 AQP12AQ8IXF9 295 aa19.49■□□□□ 0.71
TRIM65-202ENST00000540128 POMGNT2Q8NAT1 580 aa19.49■□□□□ 0.71
TRIM65-202ENST00000540128 STEAP2Q8NFT2 490 aa19.49■□□□□ 0.71
TRIM65-202ENST00000540128 BPIFA2Q96DR5 249 aa19.49■□□□□ 0.71
TRIM65-202ENST00000540128 TRIM15Q9C019 465 aa19.49■□□□□ 0.71
TRIM65-202ENST00000540128 LRMDAQ9H2I8 198 aa19.49■□□□□ 0.71
TRIM65-202ENST00000540128 NOTCH2Q04721 2471 aa19.48■□□□□ 0.71
TRIM65-202ENST00000540128 SH3D21A4FU49 640 aa19.48■□□□□ 0.71
TRIM65-202ENST00000540128 PIP5K1CO60331 668 aa19.48■□□□□ 0.71
TRIM65-202ENST00000540128 OR6A2O95222 327 aa19.48■□□□□ 0.71
TRIM65-202ENST00000540128 STAMBPO95630 424 aa19.48■□□□□ 0.71
TRIM65-202ENST00000540128 ADORA3P0DMS8 318 aa19.48■□□□□ 0.71
TRIM65-202ENST00000540128 IFI30P13284 250 aa19.48■□□□□ 0.71
TRIM65-202ENST00000540128 HLA-DOBP13765 273 aa19.48■□□□□ 0.71
TRIM65-202ENST00000540128 SELENOPP49908 381 aa19.48■□□□□ 0.71
TRIM65-202ENST00000540128 CLDN17P56750 224 aa19.48■□□□□ 0.71
TRIM65-202ENST00000540128 TSPO2Q5TGU0 170 aa19.48■□□□□ 0.71
TRIM65-202ENST00000540128 TBPL2Q6SJ96 375 aa19.48■□□□□ 0.71
TRIM65-202ENST00000540128 ANKK1Q8NFD2 765 aa19.48■□□□□ 0.71
TRIM65-202ENST00000540128 LRGUKQ96M69 825 aa19.48■□□□□ 0.71
TRIM65-202ENST00000540128 SEPHS2Q99611 448 aa19.48■□□□□ 0.71
TRIM65-202ENST00000540128 LINC00470Q9BZP3 86 aa19.48■□□□□ 0.71
TRIM65-202ENST00000540128 SLCO5A1Q9H2Y9 848 aa19.48■□□□□ 0.71
TRIM65-202ENST00000540128 MMADHCQ9H3L0 296 aaPredicted RBP19.48■□□□□ 0.71
TRIM65-202ENST00000540128 SLC7A10Q9NS82 523 aa19.48■□□□□ 0.71
TRIM65-202ENST00000540128 ASB6Q9NWX5 421 aa19.48■□□□□ 0.71
TRIM65-202ENST00000540128 POMPQ9Y244 141 aa19.48■□□□□ 0.71
TRIM65-202ENST00000540128 FAM221AA4D161 298 aa19.47■□□□□ 0.71
TRIM65-202ENST00000540128 IGHV3-9P01782 118 aa19.47■□□□□ 0.71
TRIM65-202ENST00000540128 UMPSP11172 480 aa19.47■□□□□ 0.71
TRIM65-202ENST00000540128 PRF1P14222 555 aa19.47■□□□□ 0.71
TRIM65-202ENST00000540128 MAKP20794 623 aa19.47■□□□□ 0.71
TRIM65-202ENST00000540128 AHCYP23526 432 aa19.47■□□□□ 0.71
TRIM65-202ENST00000540128 SSTR2P30874 369 aa19.47■□□□□ 0.71
TRIM65-202ENST00000540128 HMGA2P52926 109 aa19.47■□□□□ 0.71
TRIM65-202ENST00000540128 CBX1P83916 185 aa19.47■□□□□ 0.71
TRIM65-202ENST00000540128 C22orf34Q6ZV56 151 aa19.47■□□□□ 0.71
TRIM65-202ENST00000540128 TMPRSS11FQ6ZWK6 438 aa19.47■□□□□ 0.71
TRIM65-202ENST00000540128 NANOGNBQ7Z5D8 188 aa19.47■□□□□ 0.71
TRIM65-202ENST00000540128 UBE2J2Q8N2K1 259 aa19.47■□□□□ 0.71
TRIM65-202ENST00000540128 ZNF433Q8N7K0 673 aaPredicted RBP19.47■□□□□ 0.71
TRIM65-202ENST00000540128 KISS1RQ969F8 398 aaPredicted RBP19.47■□□□□ 0.71
TRIM65-202ENST00000540128 SLC7A8Q9UHI5 535 aa19.47■□□□□ 0.71
TRIM65-202ENST00000540128 PRR14LQ5THK1 2151 aa19.47■□□□□ 0.71
TRIM65-202ENST00000540128 CELSR2Q9HCU4 2923 aa19.46■□□□□ 0.71
TRIM65-202ENST00000540128 TRBV4-1A0A0J9YWV2 114 aa19.46■□□□□ 0.71
TRIM65-202ENST00000540128 AKAP8O43823 692 aaKnown RBP19.46■□□□□ 0.71
TRIM65-202ENST00000540128 KRT36O76013 467 aa19.46■□□□□ 0.71
TRIM65-202ENST00000540128 HOXB6P17509 224 aaKnown RBP19.46■□□□□ 0.71
TRIM65-202ENST00000540128 POU3F1Q03052 451 aaPredicted RBP19.46■□□□□ 0.71
TRIM65-202ENST00000540128 CHRNB3Q05901 458 aa19.46■□□□□ 0.71
TRIM65-202ENST00000540128 FAPQ12884 760 aa19.46■□□□□ 0.71
TRIM65-202ENST00000540128 ANKDD1AQ495B1 522 aa19.46■□□□□ 0.71
TRIM65-202ENST00000540128 FAM98BQ52LJ0 330 aaKnown RBP19.46■□□□□ 0.71
TRIM65-202ENST00000540128 NIPAL3Q6P499 406 aa19.46■□□□□ 0.71
TRIM65-202ENST00000540128 RRM2BQ7LG56 351 aa19.46■□□□□ 0.71
TRIM65-202ENST00000540128 CDK20Q8IZL9 346 aa19.46■□□□□ 0.71
TRIM65-202ENST00000540128 TMEM123Q8N131 208 aa19.46■□□□□ 0.71
TRIM65-202ENST00000540128 TXNDC15Q96J42 360 aa19.46■□□□□ 0.71
TRIM65-202ENST00000540128 OR2M2Q96R28 347 aa19.46■□□□□ 0.71
TRIM65-202ENST00000540128 ACTR6Q9GZN1 396 aa19.46■□□□□ 0.71
TRIM65-202ENST00000540128 UPB1Q9UBR1 384 aa19.46■□□□□ 0.71
TRIM65-202ENST00000540128 HIF3AQ9Y2N7 669 aa19.46■□□□□ 0.71
TRIM65-202ENST00000540128 NAV2Q8IVL1 2488 aa19.46■□□□□ 0.71
TRIM65-202ENST00000540128 CRYBG3Q68DQ2 2970 aa19.45■□□□□ 0.7
TRIM65-202ENST00000540128 GOSR1O95249 250 aa19.45■□□□□ 0.7
TRIM65-202ENST00000540128 LIMS1P48059 325 aa19.45■□□□□ 0.7
TRIM65-202ENST00000540128 SLC9A3P48764 834 aa19.45■□□□□ 0.7
TRIM65-202ENST00000540128 RPS4XP62701 263 aaKnown RBP19.45■□□□□ 0.7
TRIM65-202ENST00000540128 IL1RL1Q01638 556 aa19.45■□□□□ 0.7
TRIM65-202ENST00000540128 RPL18Q07020 188 aaKnown RBP19.45■□□□□ 0.7
TRIM65-202ENST00000540128 FHL1Q13642 323 aa19.45■□□□□ 0.7
TRIM65-202ENST00000540128 SEC23BQ15437 767 aa19.45■□□□□ 0.7
TRIM65-202ENST00000540128 ANKRD34AQ69YU3 496 aa19.45■□□□□ 0.7
TRIM65-202ENST00000540128 ASRGL1Q7L266 308 aa19.45■□□□□ 0.7
TRIM65-202ENST00000540128 BHLHA15Q7RTS1 189 aaPredicted RBP19.45■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms