RNA–Protein interactions for RNA: ENST00000538886.5

GGA3-202, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 1 (best) BASIC

Gene GGA3, Length 3,766 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-202ENST00000538886 SARAFQ96BY9 339 aa7.98□□□□□ -1.13
GGA3-202ENST00000538886 SNRNP40Q96DI7 357 aaKnown RBP7.98□□□□□ -1.13
GGA3-202ENST00000538886 DPCDQ9BVM2 203 aaPredicted RBP7.98□□□□□ -1.13
GGA3-202ENST00000538886 SEC61A2Q9H9S3 476 aa7.98□□□□□ -1.13
GGA3-202ENST00000538886 GPATCH2Q9NW75 528 aa7.98□□□□□ -1.13
GGA3-202ENST00000538886 CNIH4Q9P003 139 aa7.98□□□□□ -1.13
GGA3-202ENST00000538886 MCTS1Q9ULC4 181 aaKnown RBP7.98□□□□□ -1.13
GGA3-202ENST00000538886 HECTD1Q9ULT8 2610 aa7.98□□□□□ -1.13
GGA3-202ENST00000538886 TPRKBQ9Y3C4 175 aa7.98□□□□□ -1.13
GGA3-202ENST00000538886 WIF1Q9Y5W5 379 aa7.98□□□□□ -1.13
GGA3-202ENST00000538886 USF3Q68DE3 2245 aa7.98□□□□□ -1.13
GGA3-202ENST00000538886 IGKV3D-11A0A0A0MRZ8 115 aa7.98□□□□□ -1.13
GGA3-202ENST00000538886 TEX46H3BTG2 121 aa7.98□□□□□ -1.13
GGA3-202ENST00000538886 ANKRD28O15084 1053 aa7.98□□□□□ -1.13
GGA3-202ENST00000538886 SHOXO15266 292 aa7.98□□□□□ -1.13
GGA3-202ENST00000538886 RNF13O43567 381 aa7.98□□□□□ -1.13
GGA3-202ENST00000538886 CBR3O75828 277 aa7.98□□□□□ -1.13
GGA3-202ENST00000538886 GADD45GO95257 159 aa7.98□□□□□ -1.13
GGA3-202ENST00000538886 FABP3P05413 133 aa7.98□□□□□ -1.13
GGA3-202ENST00000538886 FPR1P21462 350 aa7.98□□□□□ -1.13
GGA3-202ENST00000538886 SNTB1Q13884 538 aaKnown RBP7.98□□□□□ -1.13
GGA3-202ENST00000538886 PDE7AQ13946 482 aa7.98□□□□□ -1.13
GGA3-202ENST00000538886 CD226Q15762 336 aa7.98□□□□□ -1.13
GGA3-202ENST00000538886 YIF1BQ5BJH7 314 aa7.98□□□□□ -1.13
GGA3-202ENST00000538886 Q5BKY6 102 aa7.98□□□□□ -1.13
GGA3-202ENST00000538886 C6orf141Q5SZD1 244 aa7.98□□□□□ -1.13
GGA3-202ENST00000538886 AHSA2Q719I0 299 aa7.98□□□□□ -1.13
GGA3-202ENST00000538886 ZNF615Q8N8J6 731 aa7.98□□□□□ -1.13
GGA3-202ENST00000538886 ZNF675Q8TD23 568 aa7.98□□□□□ -1.13
GGA3-202ENST00000538886 ELP5Q8TE02 316 aa7.98□□□□□ -1.13
GGA3-202ENST00000538886 ST6GAL2Q96JF0 529 aa7.98□□□□□ -1.13
GGA3-202ENST00000538886 SEMA4CQ9C0C4 833 aa7.98□□□□□ -1.13
GGA3-202ENST00000538886 RANBP3Q9H6Z4 567 aaPredicted RBP7.98□□□□□ -1.13
GGA3-202ENST00000538886 UPB1Q9UBR1 384 aa7.98□□□□□ -1.13
GGA3-202ENST00000538886 TINAGQ9UJW2 476 aa7.98□□□□□ -1.13
GGA3-202ENST00000538886 SPIN1Q9Y657 262 aaPredicted RBP7.98□□□□□ -1.13
GGA3-202ENST00000538886 ZNF726A6NNF4 738 aa7.97□□□□□ -1.13
GGA3-202ENST00000538886 KDM4BO94953 1096 aa7.97□□□□□ -1.13
GGA3-202ENST00000538886 RFPL3SP0C7P2 107 aa7.97□□□□□ -1.13
GGA3-202ENST00000538886 PRG2P13727 222 aa7.97□□□□□ -1.13
GGA3-202ENST00000538886 CCNOP22674 350 aa7.97□□□□□ -1.13
GGA3-202ENST00000538886 HOXC12P31275 282 aa7.97□□□□□ -1.13
GGA3-202ENST00000538886 DDOSTP39656 456 aa7.97□□□□□ -1.13
GGA3-202ENST00000538886 CLDN15P56746 228 aa7.97□□□□□ -1.13
GGA3-202ENST00000538886 CARD18P57730 90 aa7.97□□□□□ -1.13
GGA3-202ENST00000538886 DUSP8Q13202 625 aa7.97□□□□□ -1.13
GGA3-202ENST00000538886 TOMM34Q15785 309 aaPredicted RBP7.97□□□□□ -1.13
GGA3-202ENST00000538886 DCST1Q5T197 706 aa7.97□□□□□ -1.13
GGA3-202ENST00000538886 C1QL3Q5VWW1 255 aa7.97□□□□□ -1.13
GGA3-202ENST00000538886 ARHGAP11AQ6P4F7 1023 aa7.97□□□□□ -1.13
GGA3-202ENST00000538886 PIK3C3Q8NEB9 887 aa7.97□□□□□ -1.13
GGA3-202ENST00000538886 CNIH3Q8TBE1 160 aa7.97□□□□□ -1.13
GGA3-202ENST00000538886 ROBO4Q8WZ75 1007 aa7.97□□□□□ -1.13
GGA3-202ENST00000538886 FRMD6Q96NE9 622 aa7.97□□□□□ -1.13
GGA3-202ENST00000538886 TEX12Q9BXU0 123 aa7.97□□□□□ -1.13
GGA3-202ENST00000538886 TTTY12Q9BZ98 90 aa7.97□□□□□ -1.13
GGA3-202ENST00000538886 MMP27Q9H306 513 aa7.97□□□□□ -1.13
GGA3-202ENST00000538886 SMURF2Q9HAU4 748 aa7.97□□□□□ -1.13
GGA3-202ENST00000538886 AMBNQ9NP70 447 aa7.97□□□□□ -1.13
GGA3-202ENST00000538886 COPZ2Q9P299 210 aa7.97□□□□□ -1.13
GGA3-202ENST00000538886 SLC7A7Q9UM01 511 aa7.97□□□□□ -1.13
GGA3-202ENST00000538886 ZNF443Q9Y2A4 671 aaPredicted RBP7.97□□□□□ -1.13
GGA3-202ENST00000538886 HMX3A6NHT5 357 aa7.97□□□□□ -1.13
GGA3-202ENST00000538886 FIGNL2A6NMB9 653 aa7.97□□□□□ -1.13
GGA3-202ENST00000538886 TNFRSF11BO00300 401 aa7.97□□□□□ -1.13
GGA3-202ENST00000538886 NTN1O95631 604 aa7.97□□□□□ -1.13
GGA3-202ENST00000538886 IL2RAP01589 272 aa7.97□□□□□ -1.13
GGA3-202ENST00000538886 ITGA2P17301 1181 aa7.97□□□□□ -1.13
GGA3-202ENST00000538886 CNR1P21554 472 aa7.97□□□□□ -1.13
GGA3-202ENST00000538886 NUP62P37198 522 aaPredicted RBP7.97□□□□□ -1.13
GGA3-202ENST00000538886 DEFA5Q01523 94 aa7.97□□□□□ -1.13
GGA3-202ENST00000538886 MRPL49Q13405 166 aaKnown RBP7.97□□□□□ -1.13
GGA3-202ENST00000538886 SLC35F1Q5T1Q4 408 aa7.97□□□□□ -1.13
GGA3-202ENST00000538886 HIPK1Q86Z02 1210 aa7.97□□□□□ -1.13
GGA3-202ENST00000538886 LGI4Q8N135 537 aa7.97□□□□□ -1.13
GGA3-202ENST00000538886 LNX2Q8N448 690 aa7.97□□□□□ -1.13
GGA3-202ENST00000538886 TMEM251Q8N6I4 163 aa7.97□□□□□ -1.13
GGA3-202ENST00000538886 OR8J3Q8NGG0 315 aa7.97□□□□□ -1.13
GGA3-202ENST00000538886 CA5BP1Q8WTZ4 195 aa7.97□□□□□ -1.13
GGA3-202ENST00000538886 SLCO4A1Q96BD0 722 aa7.97□□□□□ -1.13
GGA3-202ENST00000538886 PIP5K1AQ99755 562 aa7.97□□□□□ -1.13
GGA3-202ENST00000538886 PIGQQ9BRB3 760 aa7.97□□□□□ -1.13
GGA3-202ENST00000538886 KRCC1Q9NPI7 259 aaPredicted RBP7.97□□□□□ -1.13
GGA3-202ENST00000538886 ERVK-18Q9QC07 812 aa7.97□□□□□ -1.13
GGA3-202ENST00000538886 PLXNB3Q9ULL4 1909 aa7.97□□□□□ -1.13
GGA3-202ENST00000538886 LOC400499M0QZD8 3231 aa7.97□□□□□ -1.13
GGA3-202ENST00000538886 TRAV6A0A075B6T7 132 aa7.97□□□□□ -1.13
GGA3-202ENST00000538886 CENPVL1A0A0U1RR11 272 aa7.97□□□□□ -1.13
GGA3-202ENST00000538886 J3KTA2 159 aa7.97□□□□□ -1.13
GGA3-202ENST00000538886 TNFSF11O14788 317 aa7.97□□□□□ -1.13
GGA3-202ENST00000538886 APOC3P02656 99 aa7.97□□□□□ -1.13
GGA3-202ENST00000538886 PRKACGP22612 351 aa7.97□□□□□ -1.13
GGA3-202ENST00000538886 CRHBPP24387 322 aa7.97□□□□□ -1.13
GGA3-202ENST00000538886 ELAVL4P26378 380 aaKnown RBP7.97□□□□□ -1.13
GGA3-202ENST00000538886 RBM48Q5RL73 367 aaKnown RBP7.97□□□□□ -1.13
GGA3-202ENST00000538886 SAXO2Q658L1 398 aa7.97□□□□□ -1.13
GGA3-202ENST00000538886 HBMQ6B0K9 141 aa7.97□□□□□ -1.13
GGA3-202ENST00000538886 ZCCHC12Q6PEW1 402 aa7.97□□□□□ -1.13
GGA3-202ENST00000538886 DLEU7Q6UYE1 221 aa7.97□□□□□ -1.13
GGA3-202ENST00000538886 TRILQ7L0X0 811 aa7.97□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms