RNA–Protein interactions for RNA: ENST00000537824.2

CSMD1-215, Transcript of CUB and Sushi multiple domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CSMD1, Length 13,512 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-215ENST00000537824 SNRPGP62308 76 aaKnown RBP5.28□□□□□ -1.56
CSMD1-215ENST00000537824 CCNJQ5T5M9 372 aa5.28□□□□□ -1.56
CSMD1-215ENST00000537824 STEAP1BQ6NZ63 245 aa5.28□□□□□ -1.56
CSMD1-215ENST00000537824 MFSD4AQ8N468 514 aa5.28□□□□□ -1.56
CSMD1-215ENST00000537824 KIAA1958Q8N8K9 716 aa5.28□□□□□ -1.56
CSMD1-215ENST00000537824 SLC24A4Q8NFF2 622 aa5.28□□□□□ -1.56
CSMD1-215ENST00000537824 OR6T1Q8NGN1 323 aa5.28□□□□□ -1.56
CSMD1-215ENST00000537824 LMX1AQ8TE12 382 aa5.28□□□□□ -1.56
CSMD1-215ENST00000537824 TFGQ92734 400 aaPredicted RBP5.28□□□□□ -1.56
CSMD1-215ENST00000537824 G6PC3Q9BUM1 346 aa5.28□□□□□ -1.56
CSMD1-215ENST00000537824 ACPTQ9BZG2 426 aa5.28□□□□□ -1.56
CSMD1-215ENST00000537824 SIRT3Q9NTG7 399 aaPredicted RBP5.28□□□□□ -1.56
CSMD1-215ENST00000537824 ARID2Q68CP9 1835 aa5.28□□□□□ -1.56
CSMD1-215ENST00000537824 GPR32O75388 356 aa5.28□□□□□ -1.56
CSMD1-215ENST00000537824 PDGFBP01127 241 aaPredicted RBP5.28□□□□□ -1.56
CSMD1-215ENST00000537824 PCP4P48539 62 aa5.28□□□□□ -1.56
CSMD1-215ENST00000537824 ATPAF1Q5TC12 328 aaPredicted RBP5.28□□□□□ -1.56
CSMD1-215ENST00000537824 OR52I2Q8NH67 350 aa5.28□□□□□ -1.56
CSMD1-215ENST00000537824 GHSRQ92847 366 aa5.28□□□□□ -1.56
CSMD1-215ENST00000537824 ELOVL1Q9BW60 279 aa5.28□□□□□ -1.56
CSMD1-215ENST00000537824 CERS4Q9HA82 394 aa5.28□□□□□ -1.56
CSMD1-215ENST00000537824 FAM198AQ9UFP1 575 aa5.28□□□□□ -1.56
CSMD1-215ENST00000537824 SIX4Q9UIU6 781 aa5.28□□□□□ -1.56
CSMD1-215ENST00000537824 GDF2Q9UK05 429 aaPredicted RBP5.28□□□□□ -1.56
CSMD1-215ENST00000537824 SLC7A7Q9UM01 511 aa5.28□□□□□ -1.56
CSMD1-215ENST00000537824 ARAP2Q8WZ64 1704 aa5.28□□□□□ -1.56
CSMD1-215ENST00000537824 TRAV27A0A087WT01 109 aa5.28□□□□□ -1.56
CSMD1-215ENST00000537824 DVL1O14640 695 aa5.28□□□□□ -1.56
CSMD1-215ENST00000537824 SCO2O43819 266 aa5.28□□□□□ -1.56
CSMD1-215ENST00000537824 MMP3P08254 477 aa5.28□□□□□ -1.56
CSMD1-215ENST00000537824 FCGR2CP31995 323 aa5.28□□□□□ -1.56
CSMD1-215ENST00000537824 DVL1P1P54792 670 aaPredicted RBP5.28□□□□□ -1.56
CSMD1-215ENST00000537824 SLC10A2Q12908 348 aaPredicted RBP5.28□□□□□ -1.56
CSMD1-215ENST00000537824 PHLDA2Q53GA4 152 aa5.28□□□□□ -1.56
CSMD1-215ENST00000537824 OR4K15Q8NH41 348 aa5.28□□□□□ -1.56
CSMD1-215ENST00000537824 FOXN4Q96NZ1 517 aa5.28□□□□□ -1.56
CSMD1-215ENST00000537824 PTDSS2Q9BVG9 487 aa5.28□□□□□ -1.56
CSMD1-215ENST00000537824 GLIS2Q9BZE0 524 aaPredicted RBP5.28□□□□□ -1.56
CSMD1-215ENST00000537824 TUBB1Q9H4B7 451 aa5.28□□□□□ -1.56
CSMD1-215ENST00000537824 CA14Q9ULX7 337 aa5.28□□□□□ -1.56
CSMD1-215ENST00000537824 TERTO14746 1132 aaKnown RBP5.28□□□□□ -1.56
CSMD1-215ENST00000537824 TMEM35AQ53FP2 167 aa5.28□□□□□ -1.56
CSMD1-215ENST00000537824 PRRT3Q5FWE3 981 aa5.28□□□□□ -1.56
CSMD1-215ENST00000537824 YOD1Q5VVQ6 348 aaPredicted RBP5.28□□□□□ -1.56
CSMD1-215ENST00000537824 CREB3L4Q8TEY5 395 aa5.28□□□□□ -1.56
CSMD1-215ENST00000537824 FAM3CQ92520 227 aa5.28□□□□□ -1.56
CSMD1-215ENST00000537824 SLC41A2Q96JW4 573 aa5.28□□□□□ -1.56
CSMD1-215ENST00000537824 FAM71F1Q96KD3 344 aaPredicted RBP5.28□□□□□ -1.56
CSMD1-215ENST00000537824 OR8D2Q9GZM6 311 aa5.28□□□□□ -1.56
CSMD1-215ENST00000537824 IL17BQ9UHF5 180 aa5.28□□□□□ -1.56
CSMD1-215ENST00000537824 SIPA1L3O60292 1781 aaPredicted RBP5.28□□□□□ -1.56
CSMD1-215ENST00000537824 PIK3C2AO00443 1686 aa5.28□□□□□ -1.56
CSMD1-215ENST00000537824 RGPD4Q7Z3J3 1758 aa5.28□□□□□ -1.56
CSMD1-215ENST00000537824 SLC38A8A6NNN8 435 aa5.28□□□□□ -1.56
CSMD1-215ENST00000537824 AP4M1O00189 453 aa5.28□□□□□ -1.56
CSMD1-215ENST00000537824 EIF4EP06730 217 aaKnown RBP5.28□□□□□ -1.56
CSMD1-215ENST00000537824 LPLP06858 475 aa5.28□□□□□ -1.56
CSMD1-215ENST00000537824 OR8G3PP0DMU2 310 aa5.28□□□□□ -1.56
CSMD1-215ENST00000537824 AADACP22760 399 aa5.28□□□□□ -1.56
CSMD1-215ENST00000537824 TPPP2P59282 170 aa5.28□□□□□ -1.56
CSMD1-215ENST00000537824 RPP30P78346 268 aaKnown RBP5.28□□□□□ -1.56
CSMD1-215ENST00000537824 UQCC3Q6UW78 93 aa5.28□□□□□ -1.56
CSMD1-215ENST00000537824 MAML2Q8IZL2 1156 aaPredicted RBP5.28□□□□□ -1.56
CSMD1-215ENST00000537824 FAM26EQ8N5C1 309 aa5.28□□□□□ -1.56
CSMD1-215ENST00000537824 FAM160A2Q8N612 972 aaPredicted RBP5.28□□□□□ -1.56
CSMD1-215ENST00000537824 TMEM239Q8WW34 195 aa5.28□□□□□ -1.56
CSMD1-215ENST00000537824 KHSRPQ92945 711 aaKnown RBP eCLIP5.28□□□□□ -1.56
CSMD1-215ENST00000537824 MACROD1Q9BQ69 325 aa5.28□□□□□ -1.56
CSMD1-215ENST00000537824 TPPP3Q9BW30 176 aa5.28□□□□□ -1.56
CSMD1-215ENST00000537824 AK3Q9UIJ7 227 aa5.28□□□□□ -1.56
CSMD1-215ENST00000537824 GOLT1BQ9Y3E0 138 aa5.28□□□□□ -1.56
CSMD1-215ENST00000537824 TECPR2O15040 1411 aa5.28□□□□□ -1.56
CSMD1-215ENST00000537824 SLC16A5O15375 505 aa5.28□□□□□ -1.56
CSMD1-215ENST00000537824 ATP1B1P05026 303 aa5.28□□□□□ -1.56
CSMD1-215ENST00000537824 RPS12P25398 132 aaKnown RBP5.28□□□□□ -1.56
CSMD1-215ENST00000537824 HMGCLP35914 325 aa5.28□□□□□ -1.56
CSMD1-215ENST00000537824 GATMP50440 423 aa5.28□□□□□ -1.56
CSMD1-215ENST00000537824 ZNF90Q03938 601 aa5.28□□□□□ -1.56
CSMD1-215ENST00000537824 MPEG1Q2M385 716 aa5.28□□□□□ -1.56
CSMD1-215ENST00000537824 LARP4Q71RC2 724 aaKnown RBP eCLIP5.28□□□□□ -1.56
CSMD1-215ENST00000537824 UBE2FQ969M7 185 aa5.28□□□□□ -1.56
CSMD1-215ENST00000537824 SCMH1Q96GD3 660 aa5.28□□□□□ -1.56
CSMD1-215ENST00000537824 ZNF558Q96NG5 402 aa5.28□□□□□ -1.56
CSMD1-215ENST00000537824 OR51I2Q9H344 312 aa5.28□□□□□ -1.56
CSMD1-215ENST00000537824 ISYNA1Q9NPH2 558 aa5.28□□□□□ -1.56
CSMD1-215ENST00000537824 PCDHB10Q9UN67 800 aa5.28□□□□□ -1.56
CSMD1-215ENST00000537824 NCOR2Q9Y618 2525 aa5.28□□□□□ -1.56
CSMD1-215ENST00000537824 PKD1L2Q7Z442 2459 aa5.28□□□□□ -1.56
CSMD1-215ENST00000537824 TMEM127O75204 238 aa5.28□□□□□ -1.56
CSMD1-215ENST00000537824 EGFP01133 1207 aa5.28□□□□□ -1.56
CSMD1-215ENST00000537824 TK1P04183 234 aa5.28□□□□□ -1.56
CSMD1-215ENST00000537824 PTGER1P34995 402 aa5.28□□□□□ -1.56
CSMD1-215ENST00000537824 HOXC5Q00444 222 aa5.28□□□□□ -1.56
CSMD1-215ENST00000537824 TMEM217Q8N7C4 229 aa5.28□□□□□ -1.56
CSMD1-215ENST00000537824 OR8D4Q8NGM9 314 aa5.28□□□□□ -1.56
CSMD1-215ENST00000537824 ZFPM2Q8WW38 1151 aa5.28□□□□□ -1.56
CSMD1-215ENST00000537824 APIPQ96GX9 242 aa5.28□□□□□ -1.56
CSMD1-215ENST00000537824 ZCCHC4Q9H5U6 513 aa5.28□□□□□ -1.56
CSMD1-215ENST00000537824 FKRPQ9H9S5 495 aa5.28□□□□□ -1.56
CSMD1-215ENST00000537824 POMT2Q9UKY4 750 aa5.28□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms