RNA–Protein interactions for RNA: ENST00000537435.2

USP44-203, Transcript of ubiquitin specific peptidase 44, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP44, Length 2,499 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-203ENST00000537435 KRT33AO76009 404 aa13.05□□□□□ -0.32
USP44-203ENST00000537435 SLC22A5O76082 557 aa13.05□□□□□ -0.32
USP44-203ENST00000537435 NSA2O95478 260 aaKnown RBP13.05□□□□□ -0.32
USP44-203ENST00000537435 CD14P08571 375 aa13.05□□□□□ -0.32
USP44-203ENST00000537435 ALG10Q5BKT4 473 aa13.05□□□□□ -0.32
USP44-203ENST00000537435 SLC6A19Q695T7 634 aa13.05□□□□□ -0.32
USP44-203ENST00000537435 MED25Q71SY5 747 aa13.05□□□□□ -0.32
USP44-203ENST00000537435 SLC16A9Q7RTY1 509 aa13.05□□□□□ -0.32
USP44-203ENST00000537435 FAM220AQ7Z4H9 259 aa13.05□□□□□ -0.32
USP44-203ENST00000537435 ATG4DQ86TL0 474 aaPredicted RBP13.05□□□□□ -0.32
USP44-203ENST00000537435 EXD3Q8N9H8 876 aa13.05□□□□□ -0.32
USP44-203ENST00000537435 LRRC75AQ8NAA5 344 aa13.05□□□□□ -0.32
USP44-203ENST00000537435 ZNF680Q8NEM1 530 aa13.05□□□□□ -0.32
USP44-203ENST00000537435 SYNPRQ8TBG9 265 aa13.05□□□□□ -0.32
USP44-203ENST00000537435 MMABQ96EY8 250 aaPredicted RBP13.05□□□□□ -0.32
USP44-203ENST00000537435 MAP6Q96JE9 813 aa13.05□□□□□ -0.32
USP44-203ENST00000537435 ADAD1Q96M93 576 aaKnown RBP13.05□□□□□ -0.32
USP44-203ENST00000537435 MAP3K3Q99759 626 aa13.05□□□□□ -0.32
USP44-203ENST00000537435 OR10A4Q9H209 315 aa13.05□□□□□ -0.32
USP44-203ENST00000537435 DIABLOQ9NR28 239 aa13.05□□□□□ -0.32
USP44-203ENST00000537435 KLK11Q9UBX7 282 aa13.05□□□□□ -0.32
USP44-203ENST00000537435 OR5V1Q9UGF6 321 aa13.05□□□□□ -0.32
USP44-203ENST00000537435 RNF215Q9Y6U7 377 aa13.05□□□□□ -0.32
USP44-203ENST00000537435 SPTBP11277 2137 aa13.05□□□□□ -0.32
USP44-203ENST00000537435 KHNYNO15037 678 aaKnown RBP13.04□□□□□ -0.32
USP44-203ENST00000537435 ECDO95905 644 aaPredicted RBP13.04□□□□□ -0.32
USP44-203ENST00000537435 CLPSP04118 112 aa13.04□□□□□ -0.32
USP44-203ENST00000537435 F13BP05160 661 aa13.04□□□□□ -0.32
USP44-203ENST00000537435 HPGDP15428 266 aa13.04□□□□□ -0.32
USP44-203ENST00000537435 PSMB1P20618 241 aaKnown RBP13.04□□□□□ -0.32
USP44-203ENST00000537435 SOX2P48431 317 aa13.04□□□□□ -0.32
USP44-203ENST00000537435 SLC25A1P53007 311 aa13.04□□□□□ -0.32
USP44-203ENST00000537435 MAZP56270 477 aaKnown RBP13.04□□□□□ -0.32
USP44-203ENST00000537435 LGALSLQ3ZCW2 172 aaPredicted RBP13.04□□□□□ -0.32
USP44-203ENST00000537435 ESCO2Q56NI9 601 aa13.04□□□□□ -0.32
USP44-203ENST00000537435 LIPNQ5VXI9 398 aa13.04□□□□□ -0.32
USP44-203ENST00000537435 PWWP2BQ6NUJ5 590 aa13.04□□□□□ -0.32
USP44-203ENST00000537435 CBLN3Q6UW01 205 aa13.04□□□□□ -0.32
USP44-203ENST00000537435 STAC2Q6ZMT1 411 aa13.04□□□□□ -0.32
USP44-203ENST00000537435 ZSCAN1Q8NBB4 408 aa13.04□□□□□ -0.32
USP44-203ENST00000537435 FAM71CQ8NEG0 241 aa13.04□□□□□ -0.32
USP44-203ENST00000537435 ANGPTL6Q8NI99 470 aa13.04□□□□□ -0.32
USP44-203ENST00000537435 PHOSPHO1Q8TCT1 267 aa13.04□□□□□ -0.32
USP44-203ENST00000537435 PIGKQ92643 395 aa13.04□□□□□ -0.32
USP44-203ENST00000537435 TCF7L1Q9HCS4 588 aa13.04□□□□□ -0.32
USP44-203ENST00000537435 SRA1Q9HD15 236 aaKnown RBP13.04□□□□□ -0.32
USP44-203ENST00000537435 MRM2Q9UI43 246 aaKnown RBP13.04□□□□□ -0.32
USP44-203ENST00000537435 SCP2D1Q9UJQ7 156 aa13.04□□□□□ -0.32
USP44-203ENST00000537435 FOXJ3Q9UPW0 622 aa13.04□□□□□ -0.32
USP44-203ENST00000537435 A0A1B0GTQ1 180 aa13.04□□□□□ -0.32
USP44-203ENST00000537435 BLACEA4D250 179 aa13.04□□□□□ -0.32
USP44-203ENST00000537435 DCTN6O00399 190 aa13.04□□□□□ -0.32
USP44-203ENST00000537435 KHDRBS3O75525 346 aaKnown RBP13.04□□□□□ -0.32
USP44-203ENST00000537435 UPK3AO75631 287 aa13.04□□□□□ -0.32
USP44-203ENST00000537435 TACSTD2P09758 323 aa13.04□□□□□ -0.32
USP44-203ENST00000537435 PNMTP11086 282 aa13.04□□□□□ -0.32
USP44-203ENST00000537435 PTHLHP12272 177 aa13.04□□□□□ -0.32
USP44-203ENST00000537435 SDHAP31040 664 aa13.04□□□□□ -0.32
USP44-203ENST00000537435 PTH2RP49190 550 aa13.04□□□□□ -0.32
USP44-203ENST00000537435 VEGFCP49767 419 aa13.04□□□□□ -0.32
USP44-203ENST00000537435 ALKBH1Q13686 389 aaKnown RBP13.04□□□□□ -0.32
USP44-203ENST00000537435 COL28A1Q2UY09 1125 aa13.04□□□□□ -0.32
USP44-203ENST00000537435 TMEM69Q5SWH9 247 aa13.04□□□□□ -0.32
USP44-203ENST00000537435 FNDC7Q5VTL7 733 aa13.04□□□□□ -0.32
USP44-203ENST00000537435 OR8H3Q8N146 312 aa13.04□□□□□ -0.32
USP44-203ENST00000537435 OR5AK2Q8NH90 309 aa13.04□□□□□ -0.32
USP44-203ENST00000537435 C1orf216Q8TAB5 229 aa13.04□□□□□ -0.32
USP44-203ENST00000537435 ADAMTS18Q8TE60 1221 aa13.04□□□□□ -0.32
USP44-203ENST00000537435 FCAMRQ8WWV6 532 aa13.04□□□□□ -0.32
USP44-203ENST00000537435 S100A16Q96FQ6 103 aaKnown RBP13.04□□□□□ -0.32
USP44-203ENST00000537435 ZNF578Q96N58 590 aaPredicted RBP13.04□□□□□ -0.32
USP44-203ENST00000537435 TMEM184BQ9Y519 407 aaPredicted RBP13.04□□□□□ -0.32
USP44-203ENST00000537435 KNL1Q8NG31 2342 aa13.04□□□□□ -0.32
USP44-203ENST00000537435 H7C1C5 153 aa13.03□□□□□ -0.32
USP44-203ENST00000537435 UBL4AP11441 157 aa13.03□□□□□ -0.32
USP44-203ENST00000537435 SSTR2P30874 369 aa13.03□□□□□ -0.32
USP44-203ENST00000537435 SELENOPP49908 381 aa13.03□□□□□ -0.32
USP44-203ENST00000537435 ZNF81P51508 661 aa13.03□□□□□ -0.32
USP44-203ENST00000537435 AP3S2P59780 193 aa13.03□□□□□ -0.32
USP44-203ENST00000537435 LCN6P62502 163 aa13.03□□□□□ -0.32
USP44-203ENST00000537435 RPS15P62841 145 aaKnown RBP13.03□□□□□ -0.32
USP44-203ENST00000537435 EGR4Q05215 589 aa13.03□□□□□ -0.32
USP44-203ENST00000537435 LTBQ06643 244 aa13.03□□□□□ -0.32
USP44-203ENST00000537435 Q499Y3 187 aa13.03□□□□□ -0.32
USP44-203ENST00000537435 APOOLQ6UXV4 268 aa13.03□□□□□ -0.32
USP44-203ENST00000537435 Q6ZTK2 550 aa13.03□□□□□ -0.32
USP44-203ENST00000537435 NXPE2Q96DL1 559 aa13.03□□□□□ -0.32
USP44-203ENST00000537435 CLIP3Q96DZ5 547 aa13.03□□□□□ -0.32
USP44-203ENST00000537435 SORCS2Q96PQ0 1159 aa13.03□□□□□ -0.32
USP44-203ENST00000537435 CCNL2Q96S94 520 aaPredicted RBP13.03□□□□□ -0.32
USP44-203ENST00000537435 ZNF436Q9C0F3 470 aaPredicted RBP13.03□□□□□ -0.32
USP44-203ENST00000537435 SLITRK2Q9H156 845 aa13.03□□□□□ -0.32
USP44-203ENST00000537435 MMP25Q9NPA2 562 aa13.03□□□□□ -0.32
USP44-203ENST00000537435 EMC3Q9P0I2 261 aa13.03□□□□□ -0.32
USP44-203ENST00000537435 FRRS1LQ9P0K9 344 aa13.03□□□□□ -0.32
USP44-203ENST00000537435 EIF3KQ9UBQ5 218 aaKnown RBP13.03□□□□□ -0.32
USP44-203ENST00000537435 PRODH2Q9UF12 536 aa13.03□□□□□ -0.32
USP44-203ENST00000537435 MOKQ9UQ07 419 aa13.03□□□□□ -0.32
USP44-203ENST00000537435 FKBP7Q9Y680 259 aa13.03□□□□□ -0.32
USP44-203ENST00000537435 A0A0C4DFX4 3053 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 61.2 ms