RNA–Protein interactions for RNA: ENST00000536634.5

CLIP1-207, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 3

Gene CLIP1, Length 929 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-207ENST00000536634 PLA2G12AQ9BZM1 189 aa4.49□□□□□ -1.69
CLIP1-207ENST00000536634 OR2B2Q9GZK3 357 aa4.49□□□□□ -1.69
CLIP1-207ENST00000536634 PROK2Q9HC23 129 aa4.49□□□□□ -1.69
CLIP1-207ENST00000536634 SH2D2AQ9NP31 389 aa4.49□□□□□ -1.69
CLIP1-207ENST00000536634 YAE1D1Q9NRH1 226 aa4.49□□□□□ -1.69
CLIP1-207ENST00000536634 UTP6Q9NYH9 597 aaKnown RBP4.49□□□□□ -1.69
CLIP1-207ENST00000536634 LCMT1Q9UIC8 334 aa4.49□□□□□ -1.69
CLIP1-207ENST00000536634 RPS6KA6Q9UK32 745 aa4.49□□□□□ -1.69
CLIP1-207ENST00000536634 PPIEQ9UNP9 301 aaKnown RBP4.49□□□□□ -1.69
CLIP1-207ENST00000536634 EIF3LQ9Y262 564 aaKnown RBP4.49□□□□□ -1.69
CLIP1-207ENST00000536634 CADP27708 2225 aa4.48□□□□□ -1.69
CLIP1-207ENST00000536634 C15orf38-AP3S2A0A0A6YYH1 394 aa4.48□□□□□ -1.69
CLIP1-207ENST00000536634 A0A0J9YWU9 116 aa4.48□□□□□ -1.69
CLIP1-207ENST00000536634 MACROD2A1Z1Q3 448 aa4.48□□□□□ -1.69
CLIP1-207ENST00000536634 ZNF195O14628 629 aa4.48□□□□□ -1.69
CLIP1-207ENST00000536634 PSTPIP1O43586 416 aa4.48□□□□□ -1.69
CLIP1-207ENST00000536634 SPRY1O43609 319 aaPredicted RBP4.48□□□□□ -1.69
CLIP1-207ENST00000536634 TLX2O43763 284 aaPredicted RBP4.48□□□□□ -1.69
CLIP1-207ENST00000536634 SPOPO43791 374 aa4.48□□□□□ -1.69
CLIP1-207ENST00000536634 LRATO95237 230 aa4.48□□□□□ -1.69
CLIP1-207ENST00000536634 DUS4LO95620 317 aaKnown RBP4.48□□□□□ -1.69
CLIP1-207ENST00000536634 IMPA1P29218 277 aa4.48□□□□□ -1.69
CLIP1-207ENST00000536634 OPRM1P35372 400 aa4.48□□□□□ -1.69
CLIP1-207ENST00000536634 MNDAP41218 407 aa4.48□□□□□ -1.69
CLIP1-207ENST00000536634 GRIA1P42261 906 aa4.48□□□□□ -1.69
CLIP1-207ENST00000536634 SLCO1A2P46721 670 aa4.48□□□□□ -1.69
CLIP1-207ENST00000536634 ATP5J2P56134 94 aa4.48□□□□□ -1.69
CLIP1-207ENST00000536634 EIF3EP60228 445 aaKnown RBP4.48□□□□□ -1.69
CLIP1-207ENST00000536634 TBPL1P62380 186 aa4.48□□□□□ -1.69
CLIP1-207ENST00000536634 ACVR1Q04771 509 aa4.48□□□□□ -1.69
CLIP1-207ENST00000536634 HERC3Q15034 1050 aa4.48□□□□□ -1.69
CLIP1-207ENST00000536634 SIX1Q15475 284 aaPredicted RBP4.48□□□□□ -1.69
CLIP1-207ENST00000536634 CLEC12BQ2HXU8 276 aa4.48□□□□□ -1.69
CLIP1-207ENST00000536634 KLHL38Q2WGJ6 581 aa4.48□□□□□ -1.69
CLIP1-207ENST00000536634 FASTKD1Q53R41 847 aaKnown RBP4.48□□□□□ -1.69
CLIP1-207ENST00000536634 PRAMEF20Q5VT98 475 aa4.48□□□□□ -1.69
CLIP1-207ENST00000536634 CAPN13Q6MZZ7 669 aaPredicted RBP4.48□□□□□ -1.69
CLIP1-207ENST00000536634 RTL4Q6ZR62 310 aa4.48□□□□□ -1.69
CLIP1-207ENST00000536634 CDKL3Q8IVW4 592 aaPredicted RBP4.48□□□□□ -1.69
CLIP1-207ENST00000536634 LRRC25Q8N386 305 aaPredicted RBP4.48□□□□□ -1.69
CLIP1-207ENST00000536634 CAMKVQ8NCB2 501 aa4.48□□□□□ -1.69
CLIP1-207ENST00000536634 SLC13A3Q8WWT9 602 aa4.48□□□□□ -1.69
CLIP1-207ENST00000536634 WFIKKN1Q96NZ8 548 aa4.48□□□□□ -1.69
CLIP1-207ENST00000536634 BIRC8Q96P09 236 aa4.48□□□□□ -1.69
CLIP1-207ENST00000536634 PANX3Q96QZ0 392 aa4.48□□□□□ -1.69
CLIP1-207ENST00000536634 EBNA1BP2Q99848 306 aaKnown RBP4.48□□□□□ -1.69
CLIP1-207ENST00000536634 VGLL1Q99990 258 aa4.48□□□□□ -1.69
CLIP1-207ENST00000536634 MCRIP2Q9BUT9 160 aaKnown RBP4.48□□□□□ -1.69
CLIP1-207ENST00000536634 REG4Q9BYZ8 158 aa4.48□□□□□ -1.69
CLIP1-207ENST00000536634 KLHL4Q9C0H6 718 aa4.48□□□□□ -1.69
CLIP1-207ENST00000536634 AICDAQ9GZX7 198 aa4.48□□□□□ -1.69
CLIP1-207ENST00000536634 RHBGQ9H310 441 aa4.48□□□□□ -1.69
CLIP1-207ENST00000536634 LRRC40Q9H9A6 602 aa4.48□□□□□ -1.69
CLIP1-207ENST00000536634 PNO1Q9NRX1 252 aaKnown RBP4.48□□□□□ -1.69
CLIP1-207ENST00000536634 ZNHIT6Q9NWK9 470 aaKnown RBP4.48□□□□□ -1.69
CLIP1-207ENST00000536634 KLHL28Q9NXS3 571 aa4.48□□□□□ -1.69
CLIP1-207ENST00000536634 PAK5Q9P286 719 aa4.48□□□□□ -1.69
CLIP1-207ENST00000536634 SLC22A7Q9Y694 548 aa4.48□□□□□ -1.69
CLIP1-207ENST00000536634 PLCE1Q9P212 2302 aa4.47□□□□□ -1.69
CLIP1-207ENST00000536634 CASKO14936 926 aa4.47□□□□□ -1.69
CLIP1-207ENST00000536634 GPRIN2O60269 458 aa4.47□□□□□ -1.69
CLIP1-207ENST00000536634 CATP04040 527 aaKnown RBP4.47□□□□□ -1.69
CLIP1-207ENST00000536634 P04436 131 aa4.47□□□□□ -1.69
CLIP1-207ENST00000536634 GYPCP04921 128 aa4.47□□□□□ -1.69
CLIP1-207ENST00000536634 SLC35G6P0C7Q6 338 aa4.47□□□□□ -1.69
CLIP1-207ENST00000536634 CRYGSP22914 178 aa4.47□□□□□ -1.69
CLIP1-207ENST00000536634 RPS3P23396 243 aaKnown RBP eCLIP4.47□□□□□ -1.69
CLIP1-207ENST00000536634 CTNNA2P26232 953 aa4.47□□□□□ -1.69
CLIP1-207ENST00000536634 ATP5DP30049 168 aa4.47□□□□□ -1.69
CLIP1-207ENST00000536634 HNF4AP41235 474 aa4.47□□□□□ -1.69
CLIP1-207ENST00000536634 RPL21P46778 160 aaKnown RBP4.47□□□□□ -1.69
CLIP1-207ENST00000536634 RAB8AP61006 207 aa4.47□□□□□ -1.69
CLIP1-207ENST00000536634 VEZF1Q14119 521 aa4.47□□□□□ -1.69
CLIP1-207ENST00000536634 RPS6KA1Q15418 735 aa4.47□□□□□ -1.69
CLIP1-207ENST00000536634 ZKSCAN8Q15776 578 aaPredicted RBP4.47□□□□□ -1.69
CLIP1-207ENST00000536634 STX1AQ16623 288 aa4.47□□□□□ -1.69
CLIP1-207ENST00000536634 ODF4Q2M2E3 257 aa4.47□□□□□ -1.69
CLIP1-207ENST00000536634 CTU2Q2VPK5 515 aaKnown RBP4.47□□□□□ -1.69
CLIP1-207ENST00000536634 C6orf52Q5T4I8 152 aa4.47□□□□□ -1.69
CLIP1-207ENST00000536634 MBOAT1Q6ZNC8 495 aa4.47□□□□□ -1.69
CLIP1-207ENST00000536634 ZNF550Q7Z398 422 aa4.47□□□□□ -1.69
CLIP1-207ENST00000536634 GTSCR1Q86UQ5 136 aa4.47□□□□□ -1.69
CLIP1-207ENST00000536634 ZNF440Q8IYI8 595 aa4.47□□□□□ -1.69
CLIP1-207ENST00000536634 KATNAL2Q8IYT4 538 aa4.47□□□□□ -1.69
CLIP1-207ENST00000536634 CA13Q8N1Q1 262 aa4.47□□□□□ -1.69
CLIP1-207ENST00000536634 LIX1Q8N485 282 aa4.47□□□□□ -1.69
CLIP1-207ENST00000536634 MFSD9Q8NBP5 474 aa4.47□□□□□ -1.69
CLIP1-207ENST00000536634 ROBO4Q8WZ75 1007 aa4.47□□□□□ -1.69
CLIP1-207ENST00000536634 SLAMF9Q96A28 289 aa4.47□□□□□ -1.69
CLIP1-207ENST00000536634 ANKRD9Q96BM1 317 aaPredicted RBP4.47□□□□□ -1.69
CLIP1-207ENST00000536634 SFXN2Q96NB2 322 aa4.47□□□□□ -1.69
CLIP1-207ENST00000536634 FERMT1Q9BQL6 677 aa4.47□□□□□ -1.69
CLIP1-207ENST00000536634 CCDC77Q9BR77 488 aa4.47□□□□□ -1.69
CLIP1-207ENST00000536634 CABLES2Q9BTV7 478 aa4.47□□□□□ -1.69
CLIP1-207ENST00000536634 CLEC7AQ9BXN2 247 aa4.47□□□□□ -1.69
CLIP1-207ENST00000536634 TRIM15Q9C019 465 aa4.47□□□□□ -1.69
CLIP1-207ENST00000536634 SPNS1Q9H2V7 528 aa4.47□□□□□ -1.69
CLIP1-207ENST00000536634 FAM114A2Q9NRY5 505 aa4.47□□□□□ -1.69
CLIP1-207ENST00000536634 HOMER3Q9NSC5 361 aa4.47□□□□□ -1.69
CLIP1-207ENST00000536634 ANO10Q9NW15 660 aa4.47□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms