RNA–Protein interactions for RNA: ENST00000535452.5

CLSTN3-205, Transcript of calsyntenin 3, humanhuman

TSL 4

Gene CLSTN3, Length 533 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-205ENST00000535452 SELENOVP59797 346 aa11.54□□□□□ -0.56
CLSTN3-205ENST00000535452 RPS23P62266 143 aaKnown RBP11.54□□□□□ -0.56
CLSTN3-205ENST00000535452 CDK6Q00534 326 aa11.54□□□□□ -0.56
CLSTN3-205ENST00000535452 PMS2P3Q13401 168 aa11.54□□□□□ -0.56
CLSTN3-205ENST00000535452 DAG1Q14118 895 aa11.54□□□□□ -0.56
CLSTN3-205ENST00000535452 MPP2Q14168 576 aa11.54□□□□□ -0.56
CLSTN3-205ENST00000535452 EFNB3Q15768 340 aa11.54□□□□□ -0.56
CLSTN3-205ENST00000535452 SLC9B1Q4ZJI4 515 aa11.54□□□□□ -0.56
CLSTN3-205ENST00000535452 FAM91A1Q658Y4 838 aa11.54□□□□□ -0.56
CLSTN3-205ENST00000535452 EPHX4Q8IUS5 362 aa11.54□□□□□ -0.56
CLSTN3-205ENST00000535452 NUP37Q8NFH4 326 aa11.54□□□□□ -0.56
CLSTN3-205ENST00000535452 BOD1Q96IK1 185 aa11.54□□□□□ -0.56
CLSTN3-205ENST00000535452 MAELQ96JY0 434 aaKnown RBP11.54□□□□□ -0.56
CLSTN3-205ENST00000535452 ZNF442Q9H7R0 627 aa11.54□□□□□ -0.56
CLSTN3-205ENST00000535452 GPR160Q9UJ42 338 aa11.54□□□□□ -0.56
CLSTN3-205ENST00000535452 CMAHPQ9Y471 501 aa11.54□□□□□ -0.56
CLSTN3-205ENST00000535452 USH1CQ9Y6N9 552 aa11.54□□□□□ -0.56
CLSTN3-205ENST00000535452 M0R082 166 aa11.53□□□□□ -0.56
CLSTN3-205ENST00000535452 M0R3G1 203 aa11.53□□□□□ -0.56
CLSTN3-205ENST00000535452 UPK3AO75631 287 aa11.53□□□□□ -0.56
CLSTN3-205ENST00000535452 TGFAP01135 160 aa11.53□□□□□ -0.56
CLSTN3-205ENST00000535452 CECR9P0C854 216 aa11.53□□□□□ -0.56
CLSTN3-205ENST00000535452 PRG2P13727 222 aa11.53□□□□□ -0.56
CLSTN3-205ENST00000535452 DAOP14920 347 aa11.53□□□□□ -0.56
CLSTN3-205ENST00000535452 WDR4P57081 412 aaKnown RBP11.53□□□□□ -0.56
CLSTN3-205ENST00000535452 TUBA1BP68363 451 aa11.53□□□□□ -0.56
CLSTN3-205ENST00000535452 TUBA4AP68366 448 aa11.53□□□□□ -0.56
CLSTN3-205ENST00000535452 ARF1P84077 181 aaKnown RBP11.53□□□□□ -0.56
CLSTN3-205ENST00000535452 SLC25A3Q00325 362 aa11.53□□□□□ -0.56
CLSTN3-205ENST00000535452 SWI5Q1ZZU3 235 aa11.53□□□□□ -0.56
CLSTN3-205ENST00000535452 CEACAM16Q2WEN9 425 aa11.53□□□□□ -0.56
CLSTN3-205ENST00000535452 TNFAIP8L3Q5GJ75 292 aa11.53□□□□□ -0.56
CLSTN3-205ENST00000535452 SLC2A7Q6PXP3 512 aa11.53□□□□□ -0.56
CLSTN3-205ENST00000535452 TUBA1AQ71U36 451 aa11.53□□□□□ -0.56
CLSTN3-205ENST00000535452 ARMC8Q8IUR7 673 aa11.53□□□□□ -0.56
CLSTN3-205ENST00000535452 KDM8Q8N371 416 aa11.53□□□□□ -0.56
CLSTN3-205ENST00000535452 ZIC4Q8N9L1 334 aa11.53□□□□□ -0.56
CLSTN3-205ENST00000535452 NFKBIDQ8NI38 313 aa11.53□□□□□ -0.56
CLSTN3-205ENST00000535452 ZNF417Q8TAU3 575 aa11.53□□□□□ -0.56
CLSTN3-205ENST00000535452 SLC26A7Q8TE54 656 aa11.53□□□□□ -0.56
CLSTN3-205ENST00000535452 BCL2L2Q92843 193 aaPredicted RBP11.53□□□□□ -0.56
CLSTN3-205ENST00000535452 SPDL1Q96EA4 605 aa11.53□□□□□ -0.56
CLSTN3-205ENST00000535452 SORCS2Q96PQ0 1159 aa11.53□□□□□ -0.56
CLSTN3-205ENST00000535452 ZNF587Q96SQ5 575 aaPredicted RBP11.53□□□□□ -0.56
CLSTN3-205ENST00000535452 MS4A5Q9H3V2 200 aa11.53□□□□□ -0.56
CLSTN3-205ENST00000535452 CCDC167Q9P0B6 97 aa11.53□□□□□ -0.56
CLSTN3-205ENST00000535452 SH3PXD2BA1X283 911 aa11.52□□□□□ -0.57
CLSTN3-205ENST00000535452 ZNF99A8MXY4 864 aaPredicted RBP11.52□□□□□ -0.57
CLSTN3-205ENST00000535452 TMEM229AB2RXF0 380 aa11.52□□□□□ -0.57
CLSTN3-205ENST00000535452 RPL36A-HNRNPH2H7BZ11 118 aa11.52□□□□□ -0.57
CLSTN3-205ENST00000535452 FARS2O95363 451 aaKnown RBP11.52□□□□□ -0.57
CLSTN3-205ENST00000535452 HIST1H2ABP04908 130 aa11.52□□□□□ -0.57
CLSTN3-205ENST00000535452 IGHV4-31P0DP07 118 aa11.52□□□□□ -0.57
CLSTN3-205ENST00000535452 IFNGR1P15260 489 aa11.52□□□□□ -0.57
CLSTN3-205ENST00000535452 CBLP22681 906 aa11.52□□□□□ -0.57
CLSTN3-205ENST00000535452 GRPRP30550 384 aa11.52□□□□□ -0.57
CLSTN3-205ENST00000535452 THBS2P35442 1172 aa11.52□□□□□ -0.57
CLSTN3-205ENST00000535452 POU3F1Q03052 451 aaPredicted RBP11.52□□□□□ -0.57
CLSTN3-205ENST00000535452 PLAURQ03405 335 aa11.52□□□□□ -0.57
CLSTN3-205ENST00000535452 SNTB2Q13425 540 aaKnown RBP11.52□□□□□ -0.57
CLSTN3-205ENST00000535452 SCARB2Q14108 478 aa11.52□□□□□ -0.57
CLSTN3-205ENST00000535452 CYP51A1Q16850 503 aa11.52□□□□□ -0.57
CLSTN3-205ENST00000535452 GSG1Q2KHT4 349 aa11.52□□□□□ -0.57
CLSTN3-205ENST00000535452 GTDC1Q4AE62 458 aa11.52□□□□□ -0.57
CLSTN3-205ENST00000535452 SWT1Q5T5J6 900 aaKnown RBP11.52□□□□□ -0.57
CLSTN3-205ENST00000535452 CARD17Q5XLA6 110 aa11.52□□□□□ -0.57
CLSTN3-205ENST00000535452 C6orf89Q6UWU4 347 aa11.52□□□□□ -0.57
CLSTN3-205ENST00000535452 HIST3H2AQ7L7L0 130 aa11.52□□□□□ -0.57
CLSTN3-205ENST00000535452 LSMEM1Q8N8F7 131 aa11.52□□□□□ -0.57
CLSTN3-205ENST00000535452 ANKS4BQ8N8V4 417 aa11.52□□□□□ -0.57
CLSTN3-205ENST00000535452 SCAIQ8N9R8 606 aa11.52□□□□□ -0.57
CLSTN3-205ENST00000535452 ADPRHL1Q8NDY3 354 aa11.52□□□□□ -0.57
CLSTN3-205ENST00000535452 OR9I1Q8NGQ6 314 aa11.52□□□□□ -0.57
CLSTN3-205ENST00000535452 GTF2H4Q92759 462 aa11.52□□□□□ -0.57
CLSTN3-205ENST00000535452 HIST1H2ACQ93077 130 aa11.52□□□□□ -0.57
CLSTN3-205ENST00000535452 MAL2Q969L2 176 aa11.52□□□□□ -0.57
CLSTN3-205ENST00000535452 KTI12Q96EK9 354 aaPredicted RBP11.52□□□□□ -0.57
CLSTN3-205ENST00000535452 FOXN4Q96NZ1 517 aa11.52□□□□□ -0.57
CLSTN3-205ENST00000535452 ULBP2Q9BZM5 246 aa11.52□□□□□ -0.57
CLSTN3-205ENST00000535452 DENND2DQ9H6A0 471 aaPredicted RBP11.52□□□□□ -0.57
CLSTN3-205ENST00000535452 GPR35Q9HC97 309 aa11.52□□□□□ -0.57
CLSTN3-205ENST00000535452 TRIM33Q9UPN9 1127 aa11.52□□□□□ -0.57
CLSTN3-205ENST00000535452 A0A1B0GWA3 101 aa11.51□□□□□ -0.57
CLSTN3-205ENST00000535452 ANGPT2O15123 496 aa11.51□□□□□ -0.57
CLSTN3-205ENST00000535452 NPIPB7O75200 414 aa11.51□□□□□ -0.57
CLSTN3-205ENST00000535452 SERPINI2O75830 405 aa11.51□□□□□ -0.57
CLSTN3-205ENST00000535452 LY6HO94772 140 aa11.51□□□□□ -0.57
CLSTN3-205ENST00000535452 ZNF432O94892 652 aa11.51□□□□□ -0.57
CLSTN3-205ENST00000535452 UBL3O95164 117 aa11.51□□□□□ -0.57
CLSTN3-205ENST00000535452 MT-ATP6P00846 226 aa11.51□□□□□ -0.57
CLSTN3-205ENST00000535452 IGKV3-15P01624 115 aa11.51□□□□□ -0.57
CLSTN3-205ENST00000535452 ZNF23P17027 643 aa11.51□□□□□ -0.57
CLSTN3-205ENST00000535452 MVDP53602 400 aa11.51□□□□□ -0.57
CLSTN3-205ENST00000535452 HOXC5Q00444 222 aa11.51□□□□□ -0.57
CLSTN3-205ENST00000535452 PUDPQ08623 228 aa11.51□□□□□ -0.57
CLSTN3-205ENST00000535452 ADIPOQQ15848 244 aa11.51□□□□□ -0.57
CLSTN3-205ENST00000535452 ADRM1Q16186 407 aa11.51□□□□□ -0.57
CLSTN3-205ENST00000535452 KRT80Q6KB66 452 aa11.51□□□□□ -0.57
CLSTN3-205ENST00000535452 DHRS4L2Q6PKH6 230 aa11.51□□□□□ -0.57
CLSTN3-205ENST00000535452 EPGNQ6UW88 154 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms