RNA–Protein interactions for RNA: ENST00000533001.1

KNL1-211, Transcript of kinetochore scaffold 1, humanhuman

TSL 1 (best)

Gene KNL1, Length 5,923 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNL1-211ENST00000533001 SH2D4BQ5SQS7 431 aa1.34□□□□□ -2.19
KNL1-211ENST00000533001 PDZK1Q5T2W1 519 aa1.34□□□□□ -2.19
KNL1-211ENST00000533001 RNF220Q5VTB9 566 aa1.34□□□□□ -2.19
KNL1-211ENST00000533001 MED27Q6P2C8 311 aa1.34□□□□□ -2.19
KNL1-211ENST00000533001 SERPINA11Q86U17 422 aa1.34□□□□□ -2.19
KNL1-211ENST00000533001 NUDT13Q86X67 352 aa1.34□□□□□ -2.19
KNL1-211ENST00000533001 CNGA4Q8IV77 575 aa1.34□□□□□ -2.19
KNL1-211ENST00000533001 SLC35F6Q8N357 371 aa1.34□□□□□ -2.19
KNL1-211ENST00000533001 PNKDQ8N490 385 aa1.34□□□□□ -2.19
KNL1-211ENST00000533001 CEP112Q8N8E3 955 aa1.34□□□□□ -2.19
KNL1-211ENST00000533001 ZNF511Q8NB15 262 aa1.34□□□□□ -2.19
KNL1-211ENST00000533001 ADPRHL1Q8NDY3 354 aa1.34□□□□□ -2.19
KNL1-211ENST00000533001 ST7LQ8TDW4 575 aa1.34□□□□□ -2.19
KNL1-211ENST00000533001 SLC7A6Q92536 515 aa1.34□□□□□ -2.19
KNL1-211ENST00000533001 SLC30A2Q9BRI3 323 aa1.34□□□□□ -2.19
KNL1-211ENST00000533001 YIPF2Q9BWQ6 316 aa1.34□□□□□ -2.19
KNL1-211ENST00000533001 C1QTNF6Q9BXI9 259 aa1.34□□□□□ -2.19
KNL1-211ENST00000533001 CXorf56Q9H5V9 222 aa1.34□□□□□ -2.19
KNL1-211ENST00000533001 UBQLN4Q9NRR5 601 aa1.34□□□□□ -2.19
KNL1-211ENST00000533001 MED29Q9NX70 200 aa1.34□□□□□ -2.19
KNL1-211ENST00000533001 NUDT4Q9NZJ9 180 aa1.34□□□□□ -2.19
KNL1-211ENST00000533001 LHFPL6Q9Y693 200 aa1.34□□□□□ -2.19
KNL1-211ENST00000533001 A0A087WUJ7 227 aa1.34□□□□□ -2.2
KNL1-211ENST00000533001 MEX3AA1L020 520 aaKnown RBP1.34□□□□□ -2.2
KNL1-211ENST00000533001 SYNDIG1LA6NDD5 238 aa1.34□□□□□ -2.2
KNL1-211ENST00000533001 SLC22A31A6NKX4 558 aa1.34□□□□□ -2.2
KNL1-211ENST00000533001 KIF2AO00139 706 aaPredicted RBP1.34□□□□□ -2.2
KNL1-211ENST00000533001 ITM2AO43736 263 aa1.34□□□□□ -2.2
KNL1-211ENST00000533001 PTP4A3O75365 173 aa1.34□□□□□ -2.2
KNL1-211ENST00000533001 CD3EP07766 207 aa1.34□□□□□ -2.2
KNL1-211ENST00000533001 EGR2P11161 476 aaPredicted RBP1.34□□□□□ -2.2
KNL1-211ENST00000533001 NAT2P11245 290 aa1.34□□□□□ -2.2
KNL1-211ENST00000533001 SDHAP31040 664 aa1.34□□□□□ -2.2
KNL1-211ENST00000533001 LUMP51884 338 aaPredicted RBP1.34□□□□□ -2.2
KNL1-211ENST00000533001 CCL8P80075 99 aa1.34□□□□□ -2.2
KNL1-211ENST00000533001 MRPS34P82930 218 aaKnown RBP1.34□□□□□ -2.2
KNL1-211ENST00000533001 HOXC5Q00444 222 aa1.34□□□□□ -2.2
KNL1-211ENST00000533001 PRB3Q04118 309 aaPredicted RBP1.34□□□□□ -2.2
KNL1-211ENST00000533001 SRYQ05066 204 aa1.34□□□□□ -2.2
KNL1-211ENST00000533001 ACTN3Q08043 901 aaPredicted RBP1.34□□□□□ -2.2
KNL1-211ENST00000533001 FOXL1Q12952 345 aa1.34□□□□□ -2.2
KNL1-211ENST00000533001 XP32Q5T750 250 aa1.34□□□□□ -2.2
KNL1-211ENST00000533001 PRAMEF8Q5VWM4 474 aa1.34□□□□□ -2.2
KNL1-211ENST00000533001 PRAMEF7Q5VXH5 474 aa1.34□□□□□ -2.2
KNL1-211ENST00000533001 ARMC6Q6NXE6 501 aa1.34□□□□□ -2.2
KNL1-211ENST00000533001 FBXW12Q6X9E4 464 aa1.34□□□□□ -2.2
KNL1-211ENST00000533001 Q6ZR54 194 aa1.34□□□□□ -2.2
KNL1-211ENST00000533001 RNF130Q86XS8 419 aa1.34□□□□□ -2.2
KNL1-211ENST00000533001 WFDC8Q8IUA0 241 aa1.34□□□□□ -2.2
KNL1-211ENST00000533001 CDRT4Q8N9R6 151 aa1.34□□□□□ -2.2
KNL1-211ENST00000533001 OR6S1Q8NH40 331 aa1.34□□□□□ -2.2
KNL1-211ENST00000533001 RDH11Q8TC12 318 aa1.34□□□□□ -2.2
KNL1-211ENST00000533001 TESCQ96BS2 214 aa1.34□□□□□ -2.2
KNL1-211ENST00000533001 PPP1R2P1Q96PQ5 205 aa1.34□□□□□ -2.2
KNL1-211ENST00000533001 OR7D2Q96RA2 312 aa1.34□□□□□ -2.2
KNL1-211ENST00000533001 VAPAQ9P0L0 249 aa1.34□□□□□ -2.2
KNL1-211ENST00000533001 PCDHB10Q9UN67 800 aa1.34□□□□□ -2.2
KNL1-211ENST00000533001 HIF3AQ9Y2N7 669 aa1.34□□□□□ -2.2
KNL1-211ENST00000533001 HDGFL3Q9Y3E1 203 aa1.34□□□□□ -2.2
KNL1-211ENST00000533001 A0A096LPK6 155 aa1.34□□□□□ -2.2
KNL1-211ENST00000533001 IGLV1-36A0A0B4J1U3 117 aa1.34□□□□□ -2.2
KNL1-211ENST00000533001 FAM90A10PA6NDY2 464 aa1.34□□□□□ -2.2
KNL1-211ENST00000533001 SDHDO14521 159 aa1.34□□□□□ -2.2
KNL1-211ENST00000533001 PRKD3O94806 890 aa1.34□□□□□ -2.2
KNL1-211ENST00000533001 IGHMP01871 453 aa1.34□□□□□ -2.2
KNL1-211ENST00000533001 HSP90AA1P07900 732 aaKnown RBP1.34□□□□□ -2.2
KNL1-211ENST00000533001 ALOX5P09917 674 aa1.34□□□□□ -2.2
KNL1-211ENST00000533001 MATN1P21941 496 aa1.34□□□□□ -2.2
KNL1-211ENST00000533001 PSG4Q00888 419 aa1.34□□□□□ -2.2
KNL1-211ENST00000533001 CLCQ05315 142 aa1.34□□□□□ -2.2
KNL1-211ENST00000533001 PLCXD2Q0VAA5 305 aa1.34□□□□□ -2.2
KNL1-211ENST00000533001 IKZF1Q13422 519 aa1.34□□□□□ -2.2
KNL1-211ENST00000533001 SQLEQ14534 574 aa1.34□□□□□ -2.2
KNL1-211ENST00000533001 KCNMB1Q16558 191 aa1.34□□□□□ -2.2
KNL1-211ENST00000533001 OTPQ5XKR4 325 aa1.34□□□□□ -2.2
KNL1-211ENST00000533001 ZNF788Q6ZQV5 615 aa1.34□□□□□ -2.2
KNL1-211ENST00000533001 ANKMY2Q8IV38 441 aa1.34□□□□□ -2.2
KNL1-211ENST00000533001 GATSQ8NAP1 163 aa1.34□□□□□ -2.2
KNL1-211ENST00000533001 C7orf57Q8NEG2 295 aa1.34□□□□□ -2.2
KNL1-211ENST00000533001 NMNAT2Q9BZQ4 307 aa1.34□□□□□ -2.2
KNL1-211ENST00000533001 SDR39U1Q9NRG7 319 aaPredicted RBP1.34□□□□□ -2.2
KNL1-211ENST00000533001 MKLN1Q9UL63 735 aa1.34□□□□□ -2.2
KNL1-211ENST00000533001 H3BML4 177 aa1.33□□□□□ -2.2
KNL1-211ENST00000533001 ACOT7O00154 380 aa1.33□□□□□ -2.2
KNL1-211ENST00000533001 EIF1AYO14602 144 aaKnown RBP1.33□□□□□ -2.2
KNL1-211ENST00000533001 SCO2O43819 266 aa1.33□□□□□ -2.2
KNL1-211ENST00000533001 TFP02787 698 aa1.33□□□□□ -2.2
KNL1-211ENST00000533001 CPOXP36551 454 aa1.33□□□□□ -2.2
KNL1-211ENST00000533001 SLC1A3P43003 542 aa1.33□□□□□ -2.2
KNL1-211ENST00000533001 DYNLT3P51808 116 aa1.33□□□□□ -2.2
KNL1-211ENST00000533001 CDH11P55287 796 aa1.33□□□□□ -2.2
KNL1-211ENST00000533001 KCNJ10P78508 379 aa1.33□□□□□ -2.2
KNL1-211ENST00000533001 BASP1P80723 227 aaKnown RBP1.33□□□□□ -2.2
KNL1-211ENST00000533001 FAPQ12884 760 aa1.33□□□□□ -2.2
KNL1-211ENST00000533001 EBI3Q14213 229 aa1.33□□□□□ -2.2
KNL1-211ENST00000533001 TMEM95Q3KNT9 176 aa1.33□□□□□ -2.2
KNL1-211ENST00000533001 VAX1Q5SQQ9 334 aa1.33□□□□□ -2.2
KNL1-211ENST00000533001 ZNF684Q5T5D7 378 aa1.33□□□□□ -2.2
KNL1-211ENST00000533001 STUMQ69YW2 141 aa1.33□□□□□ -2.2
KNL1-211ENST00000533001 CASC4Q6P4E1 433 aa1.33□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms