RNA–Protein interactions for RNA: ENST00000532029.6

LRRK1-208, Transcript of leucine rich repeat kinase 1, humanhuman

TSL 1 (best) BASIC

Gene LRRK1, Length 1,241 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK1-208ENST00000532029 LIMS1P48059 325 aa19.76■□□□□ 0.75
LRRK1-208ENST00000532029 CLDN17P56750 224 aa19.76■□□□□ 0.75
LRRK1-208ENST00000532029 ACTR3P61158 418 aa19.76■□□□□ 0.75
LRRK1-208ENST00000532029 POU3F1Q03052 451 aaPredicted RBP19.76■□□□□ 0.75
LRRK1-208ENST00000532029 GK3PQ14409 553 aa19.76■□□□□ 0.75
LRRK1-208ENST00000532029 KPNB1Q14974 876 aaKnown RBP19.76■□□□□ 0.75
LRRK1-208ENST00000532029 FBXL19-AS1Q494R0 122 aa19.76■□□□□ 0.75
LRRK1-208ENST00000532029 TFAP2EQ6VUC0 442 aa19.76■□□□□ 0.75
LRRK1-208ENST00000532029 PXKQ7Z7A4 578 aa19.76■□□□□ 0.75
LRRK1-208ENST00000532029 OAFQ86UD1 273 aa19.76■□□□□ 0.75
LRRK1-208ENST00000532029 ZIC4Q8N9L1 334 aa19.76■□□□□ 0.75
LRRK1-208ENST00000532029 ANKK1Q8NFD2 765 aa19.76■□□□□ 0.75
LRRK1-208ENST00000532029 OR4C15Q8NGM1 316 aa19.76■□□□□ 0.75
LRRK1-208ENST00000532029 RNASE6Q93091 150 aaKnown RBP19.76■□□□□ 0.75
LRRK1-208ENST00000532029 ZNF385AQ96PM9 386 aaKnown RBP19.76■□□□□ 0.75
LRRK1-208ENST00000532029 VNN3Q9NY84 501 aa19.76■□□□□ 0.75
LRRK1-208ENST00000532029 TAS2R5Q9NYW4 299 aa19.76■□□□□ 0.75
LRRK1-208ENST00000532029 FOXD3Q9UJU5 478 aaPredicted RBP19.76■□□□□ 0.75
LRRK1-208ENST00000532029 AP4S1Q9Y587 144 aa19.76■□□□□ 0.75
LRRK1-208ENST00000532029 U3KQV3 271 aa19.76■□□□□ 0.75
LRRK1-208ENST00000532029 PCNX1Q96RV3 2341 aa19.75■□□□□ 0.75
LRRK1-208ENST00000532029 CLDN1O95832 211 aa19.75■□□□□ 0.75
LRRK1-208ENST00000532029 UQCRC1P31930 480 aa19.75■□□□□ 0.75
LRRK1-208ENST00000532029 AQP2P41181 271 aa19.75■□□□□ 0.75
LRRK1-208ENST00000532029 OMPP47874 163 aa19.75■□□□□ 0.75
LRRK1-208ENST00000532029 PPP1R8Q12972 351 aaKnown RBP19.75■□□□□ 0.75
LRRK1-208ENST00000532029 ANKDD1AQ495B1 522 aa19.75■□□□□ 0.75
LRRK1-208ENST00000532029 BEND4Q6ZU67 534 aa19.75■□□□□ 0.75
LRRK1-208ENST00000532029 ZC3HAV1Q7Z2W4 902 aaKnown RBP19.75■□□□□ 0.75
LRRK1-208ENST00000532029 C10orf67Q8IYJ2 551 aa19.75■□□□□ 0.75
LRRK1-208ENST00000532029 OR13C2Q8NGS9 318 aa19.75■□□□□ 0.75
LRRK1-208ENST00000532029 DUS3LQ96G46 650 aaKnown RBP19.75■□□□□ 0.75
LRRK1-208ENST00000532029 DNAJB9Q9UBS3 223 aa19.75■□□□□ 0.75
LRRK1-208ENST00000532029 DOPEY1Q5JWR5 2465 aa19.74■□□□□ 0.75
LRRK1-208ENST00000532029 TRAF3IP2O43734 574 aaPredicted RBP19.74■□□□□ 0.75
LRRK1-208ENST00000532029 DEAF1O75398 565 aaPredicted RBP19.74■□□□□ 0.75
LRRK1-208ENST00000532029 E2F6O75461 281 aa19.74■□□□□ 0.75
LRRK1-208ENST00000532029 TIPRLO75663 272 aa19.74■□□□□ 0.75
LRRK1-208ENST00000532029 HLA-DOBP13765 273 aa19.74■□□□□ 0.75
LRRK1-208ENST00000532029 RPL18Q07020 188 aaKnown RBP19.74■□□□□ 0.75
LRRK1-208ENST00000532029 TAF11Q15544 211 aa19.74■□□□□ 0.75
LRRK1-208ENST00000532029 NIPAL3Q6P499 406 aa19.74■□□□□ 0.75
LRRK1-208ENST00000532029 ZNF474Q6S9Z5 364 aaPredicted RBP19.74■□□□□ 0.75
LRRK1-208ENST00000532029 UBE2J2Q8N2K1 259 aa19.74■□□□□ 0.75
LRRK1-208ENST00000532029 OR51A7Q8NH64 312 aa19.74■□□□□ 0.75
LRRK1-208ENST00000532029 MOSPD2Q8NHP6 518 aa19.74■□□□□ 0.75
LRRK1-208ENST00000532029 PSMG3-AS1Q96PY0 264 aa19.74■□□□□ 0.75
LRRK1-208ENST00000532029 NDEL1Q9GZM8 345 aa19.74■□□□□ 0.75
LRRK1-208ENST00000532029 INIPQ9NRY2 104 aa19.74■□□□□ 0.75
LRRK1-208ENST00000532029 ARMC1Q9NVT9 282 aa19.74■□□□□ 0.75
LRRK1-208ENST00000532029 GALNT8Q9NY28 637 aa19.74■□□□□ 0.75
LRRK1-208ENST00000532029 ELOVL5Q9NYP7 299 aa19.74■□□□□ 0.75
LRRK1-208ENST00000532029 RCE1Q9Y256 329 aa19.74■□□□□ 0.75
LRRK1-208ENST00000532029 HIF3AQ9Y2N7 669 aa19.74■□□□□ 0.75
LRRK1-208ENST00000532029 INTS1Q8N201 2190 aaKnown RBP19.73■□□□□ 0.75
LRRK1-208ENST00000532029 TRAV27A0A087WT01 109 aa19.73■□□□□ 0.75
LRRK1-208ENST00000532029 UNC119BA6NIH7 251 aa19.73■□□□□ 0.75
LRRK1-208ENST00000532029 CDC42EP2O14613 210 aa19.73■□□□□ 0.75
LRRK1-208ENST00000532029 CLOCKO15516 846 aa19.73■□□□□ 0.75
LRRK1-208ENST00000532029 HNRNPRO43390 633 aaKnown RBP19.73■□□□□ 0.75
LRRK1-208ENST00000532029 FCGR1AP12314 374 aa19.73■□□□□ 0.75
LRRK1-208ENST00000532029 POU2F1P14859 743 aa19.73■□□□□ 0.75
LRRK1-208ENST00000532029 NTF4P34130 210 aa19.73■□□□□ 0.75
LRRK1-208ENST00000532029 TFF3Q07654 80 aa19.73■□□□□ 0.75
LRRK1-208ENST00000532029 ALG10Q5BKT4 473 aa19.73■□□□□ 0.75
LRRK1-208ENST00000532029 ZER1Q7Z7L7 766 aa19.73■□□□□ 0.75
LRRK1-208ENST00000532029 GNPDA2Q8TDQ7 276 aa19.73■□□□□ 0.75
LRRK1-208ENST00000532029 TNFRSF13CQ96RJ3 184 aa19.73■□□□□ 0.75
LRRK1-208ENST00000532029 DENND2DQ9H6A0 471 aaPredicted RBP19.73■□□□□ 0.75
LRRK1-208ENST00000532029 PRSS50Q9UI38 385 aa19.73■□□□□ 0.75
LRRK1-208ENST00000532029 A0A1W2PRG6 482 aa19.72■□□□□ 0.75
LRRK1-208ENST00000532029 ERICH4A6NGS2 130 aa19.72■□□□□ 0.75
LRRK1-208ENST00000532029 F13BP05160 661 aa19.72■□□□□ 0.75
LRRK1-208ENST00000532029 TSPAN19P0C672 248 aa19.72■□□□□ 0.75
LRRK1-208ENST00000532029 EDNRAP25101 427 aa19.72■□□□□ 0.75
LRRK1-208ENST00000532029 FASP25445 335 aa19.72■□□□□ 0.75
LRRK1-208ENST00000532029 DNAJA1P31689 397 aaKnown RBP19.72■□□□□ 0.75
LRRK1-208ENST00000532029 CD79BP40259 229 aa19.72■□□□□ 0.75
LRRK1-208ENST00000532029 SELENOPP49908 381 aa19.72■□□□□ 0.75
LRRK1-208ENST00000532029 PRPS1P60891 318 aa19.72■□□□□ 0.75
LRRK1-208ENST00000532029 RPS4XP62701 263 aaKnown RBP19.72■□□□□ 0.75
LRRK1-208ENST00000532029 LAPTM4AQ15012 233 aa19.72■□□□□ 0.75
LRRK1-208ENST00000532029 MICAQ29983 383 aa19.72■□□□□ 0.75
LRRK1-208ENST00000532029 ZBED5Q49AG3 693 aa19.72■□□□□ 0.75
LRRK1-208ENST00000532029 C1orf94Q6P1W5 598 aa19.72■□□□□ 0.75
LRRK1-208ENST00000532029 PGBD2Q6P3X8 592 aa19.72■□□□□ 0.75
LRRK1-208ENST00000532029 SLC35D2Q76EJ3 337 aa19.72■□□□□ 0.75
LRRK1-208ENST00000532029 KIF18BQ86Y91 864 aa19.72■□□□□ 0.75
LRRK1-208ENST00000532029 OR9Q2Q8NGE9 314 aa19.72■□□□□ 0.75
LRRK1-208ENST00000532029 SLCO5A1Q9H2Y9 848 aa19.72■□□□□ 0.75
LRRK1-208ENST00000532029 MED29Q9NX70 200 aa19.72■□□□□ 0.75
LRRK1-208ENST00000532029 UPB1Q9UBR1 384 aa19.72■□□□□ 0.75
LRRK1-208ENST00000532029 OR6C65A6NJZ3 312 aa19.71■□□□□ 0.75
LRRK1-208ENST00000532029 ZNF726A6NNF4 738 aa19.71■□□□□ 0.75
LRRK1-208ENST00000532029 SLC43A1O75387 559 aa19.71■□□□□ 0.75
LRRK1-208ENST00000532029 KRT33AO76009 404 aa19.71■□□□□ 0.75
LRRK1-208ENST00000532029 CNOT4O95628 575 aaKnown RBP19.71■□□□□ 0.75
LRRK1-208ENST00000532029 IGHV3-9P01782 118 aa19.71■□□□□ 0.75
LRRK1-208ENST00000532029 IFNGR1P15260 489 aa19.71■□□□□ 0.75
LRRK1-208ENST00000532029 FPR3P25089 353 aa19.71■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms