RNA–Protein interactions for RNA: ENST00000530680.1

SRPRA-204, Transcript of SRP receptor subunit alpha, humanhuman

TSL 4

Gene SRPRA, Length 558 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRPRA-204ENST00000530680 KCNJ16Q9NPI9 418 aa13.2□□□□□ -0.3
SRPRA-204ENST00000530680 ARMC1Q9NVT9 282 aa13.2□□□□□ -0.3
SRPRA-204ENST00000530680 SEC14L4Q9UDX3 406 aa13.2□□□□□ -0.3
SRPRA-204ENST00000530680 NOX1Q9Y5S8 564 aa13.2□□□□□ -0.3
SRPRA-204ENST00000530680 A0A1W2PRG6 482 aa13.19□□□□□ -0.3
SRPRA-204ENST00000530680 ZNF724A8MTY0 619 aa13.19□□□□□ -0.3
SRPRA-204ENST00000530680 ZNF814B7Z6K7 855 aa13.19□□□□□ -0.3
SRPRA-204ENST00000530680 H0YHG0 523 aa13.19□□□□□ -0.3
SRPRA-204ENST00000530680 MRPL33O75394 65 aaKnown RBP13.19□□□□□ -0.3
SRPRA-204ENST00000530680 KRT33AO76009 404 aa13.19□□□□□ -0.3
SRPRA-204ENST00000530680 CLDN14O95500 239 aa13.19□□□□□ -0.3
SRPRA-204ENST00000530680 CLDN1O95832 211 aa13.19□□□□□ -0.3
SRPRA-204ENST00000530680 AGAP20933 346 aa13.19□□□□□ -0.3
SRPRA-204ENST00000530680 RPL4P36578 427 aaKnown RBP13.19□□□□□ -0.3
SRPRA-204ENST00000530680 SLC16A1P53985 500 aa13.19□□□□□ -0.3
SRPRA-204ENST00000530680 H3F3AP84243 136 aa13.19□□□□□ -0.3
SRPRA-204ENST00000530680 VWA1Q6PCB0 445 aa13.19□□□□□ -0.3
SRPRA-204ENST00000530680 SLC46A3Q7Z3Q1 461 aa13.19□□□□□ -0.3
SRPRA-204ENST00000530680 LUZP2Q86TE4 346 aa13.19□□□□□ -0.3
SRPRA-204ENST00000530680 UBE2J2Q8N2K1 259 aa13.19□□□□□ -0.3
SRPRA-204ENST00000530680 KDM8Q8N371 416 aa13.19□□□□□ -0.3
SRPRA-204ENST00000530680 LRRC17Q8N6Y2 441 aa13.19□□□□□ -0.3
SRPRA-204ENST00000530680 AQP11Q8NBQ7 271 aa13.19□□□□□ -0.3
SRPRA-204ENST00000530680 OR10G2Q8NGC3 310 aa13.19□□□□□ -0.3
SRPRA-204ENST00000530680 OR9Q2Q8NGE9 314 aa13.19□□□□□ -0.3
SRPRA-204ENST00000530680 OR13C2Q8NGS9 318 aa13.19□□□□□ -0.3
SRPRA-204ENST00000530680 FANK1Q8TC84 345 aa13.19□□□□□ -0.3
SRPRA-204ENST00000530680 GNPDA2Q8TDQ7 276 aa13.19□□□□□ -0.3
SRPRA-204ENST00000530680 GIPC3Q8TF64 312 aa13.19□□□□□ -0.3
SRPRA-204ENST00000530680 APH1AQ96BI3 265 aa13.19□□□□□ -0.3
SRPRA-204ENST00000530680 ZNF556Q9HAH1 456 aa13.19□□□□□ -0.3
SRPRA-204ENST00000530680 PARPBPQ9NWS1 579 aa13.19□□□□□ -0.3
SRPRA-204ENST00000530680 CSMD1Q96PZ7 3565 aa13.19□□□□□ -0.3
SRPRA-204ENST00000530680 IGKV3D-15A0A087WSY6 115 aa13.18□□□□□ -0.3
SRPRA-204ENST00000530680 TRAV27A0A087WT01 109 aa13.18□□□□□ -0.3
SRPRA-204ENST00000530680 UNC119BA6NIH7 251 aa13.18□□□□□ -0.3
SRPRA-204ENST00000530680 ZNF716A6NP11 495 aa13.18□□□□□ -0.3
SRPRA-204ENST00000530680 PLPP3O14495 311 aa13.18□□□□□ -0.3
SRPRA-204ENST00000530680 RAMP1O60894 148 aa13.18□□□□□ -0.3
SRPRA-204ENST00000530680 ENTPD5O75356 428 aa13.18□□□□□ -0.3
SRPRA-204ENST00000530680 ASAH2BP0C7U1 165 aa13.18□□□□□ -0.3
SRPRA-204ENST00000530680 ZNF23P17027 643 aa13.18□□□□□ -0.3
SRPRA-204ENST00000530680 MAKP20794 623 aa13.18□□□□□ -0.3
SRPRA-204ENST00000530680 FUT4P22083 530 aa13.18□□□□□ -0.3
SRPRA-204ENST00000530680 ASCL1P50553 236 aa13.18□□□□□ -0.3
SRPRA-204ENST00000530680 CLDN17P56750 224 aa13.18□□□□□ -0.3
SRPRA-204ENST00000530680 PRPS1P60891 318 aa13.18□□□□□ -0.3
SRPRA-204ENST00000530680 LTBQ06643 244 aa13.18□□□□□ -0.3
SRPRA-204ENST00000530680 RPL18Q07020 188 aaKnown RBP13.18□□□□□ -0.3
SRPRA-204ENST00000530680 SLC17A1Q14916 467 aa13.18□□□□□ -0.3
SRPRA-204ENST00000530680 LAPTM4AQ15012 233 aa13.18□□□□□ -0.3
SRPRA-204ENST00000530680 ATP6AP1Q15904 470 aa13.18□□□□□ -0.3
SRPRA-204ENST00000530680 MICAQ29983 383 aa13.18□□□□□ -0.3
SRPRA-204ENST00000530680 ANKDD1AQ495B1 522 aa13.18□□□□□ -0.3
SRPRA-204ENST00000530680 ALG10Q5BKT4 473 aa13.18□□□□□ -0.3
SRPRA-204ENST00000530680 TMPRSS11FQ6ZWK6 438 aa13.18□□□□□ -0.3
SRPRA-204ENST00000530680 AAED1Q7RTV5 226 aa13.18□□□□□ -0.3
SRPRA-204ENST00000530680 HDDC2Q7Z4H3 204 aa13.18□□□□□ -0.3
SRPRA-204ENST00000530680 OR51A7Q8NH64 312 aa13.18□□□□□ -0.3
SRPRA-204ENST00000530680 ITLN2Q8WWU7 325 aaPredicted RBP13.18□□□□□ -0.3
SRPRA-204ENST00000530680 DUS3LQ96G46 650 aaKnown RBP13.18□□□□□ -0.3
SRPRA-204ENST00000530680 INIPQ9NRY2 104 aa13.18□□□□□ -0.3
SRPRA-204ENST00000530680 PDP1Q9P0J1 537 aaPredicted RBP13.18□□□□□ -0.3
SRPRA-204ENST00000530680 FLVCR1Q9Y5Y0 555 aa13.18□□□□□ -0.3
SRPRA-204ENST00000530680 WIPF3A6NGB9 483 aa13.17□□□□□ -0.3
SRPRA-204ENST00000530680 ZNF726A6NNF4 738 aa13.17□□□□□ -0.3
SRPRA-204ENST00000530680 TNFSF13O75888 250 aa13.17□□□□□ -0.3
SRPRA-204ENST00000530680 AQP2P41181 271 aa13.17□□□□□ -0.3
SRPRA-204ENST00000530680 KIR2DL2P43627 348 aaPredicted RBP13.17□□□□□ -0.3
SRPRA-204ENST00000530680 DAP3P51398 398 aaKnown RBP13.17□□□□□ -0.3
SRPRA-204ENST00000530680 IST1P53990 364 aa13.17□□□□□ -0.3
SRPRA-204ENST00000530680 LSM11P83369 360 aaKnown RBP eCLIP13.17□□□□□ -0.3
SRPRA-204ENST00000530680 TOP3AQ13472 1001 aaPredicted RBP13.17□□□□□ -0.3
SRPRA-204ENST00000530680 POU4F3Q15319 338 aa13.17□□□□□ -0.3
SRPRA-204ENST00000530680 ZBED5Q49AG3 693 aa13.17□□□□□ -0.3
SRPRA-204ENST00000530680 PGBD2Q6P3X8 592 aa13.17□□□□□ -0.3
SRPRA-204ENST00000530680 NIPAL3Q6P499 406 aa13.17□□□□□ -0.3
SRPRA-204ENST00000530680 BTLAQ7Z6A9 289 aa13.17□□□□□ -0.3
SRPRA-204ENST00000530680 PXKQ7Z7A4 578 aa13.17□□□□□ -0.3
SRPRA-204ENST00000530680 ATG16L2Q8NAA4 619 aa13.17□□□□□ -0.3
SRPRA-204ENST00000530680 ICA1LQ8NDH6 482 aa13.17□□□□□ -0.3
SRPRA-204ENST00000530680 OR52L1Q8NGH7 329 aa13.17□□□□□ -0.3
SRPRA-204ENST00000530680 OR4C15Q8NGM1 316 aa13.17□□□□□ -0.3
SRPRA-204ENST00000530680 LRTOMTQ8WZ04 291 aa13.17□□□□□ -0.3
SRPRA-204ENST00000530680 GTPBP3Q969Y2 492 aaKnown RBP13.17□□□□□ -0.3
SRPRA-204ENST00000530680 POLDIP3Q9BY77 421 aaKnown RBP13.17□□□□□ -0.3
SRPRA-204ENST00000530680 OPN3Q9H1Y3 402 aaPredicted RBP13.17□□□□□ -0.3
SRPRA-204ENST00000530680 VNN3Q9NY84 501 aa13.17□□□□□ -0.3
SRPRA-204ENST00000530680 UPB1Q9UBR1 384 aa13.17□□□□□ -0.3
SRPRA-204ENST00000530680 MGAT4BQ9UQ53 548 aa13.17□□□□□ -0.3
SRPRA-204ENST00000530680 CACNA1CQ13936 2221 aa13.17□□□□□ -0.3
SRPRA-204ENST00000530680 NKX2-6A6NCS4 301 aa13.16□□□□□ -0.3
SRPRA-204ENST00000530680 MSTNO14793 375 aa13.16□□□□□ -0.3
SRPRA-204ENST00000530680 FZD7O75084 574 aa13.16□□□□□ -0.3
SRPRA-204ENST00000530680 SLC43A1O75387 559 aa13.16□□□□□ -0.3
SRPRA-204ENST00000530680 BAG2O95816 211 aa13.16□□□□□ -0.3
SRPRA-204ENST00000530680 F13BP05160 661 aa13.16□□□□□ -0.3
SRPRA-204ENST00000530680 CD8BP10966 210 aa13.16□□□□□ -0.3
SRPRA-204ENST00000530680 POU2F1P14859 743 aa13.16□□□□□ -0.3
SRPRA-204ENST00000530680 GSTM3P21266 225 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms