RNA–Protein interactions for RNA: ENST00000521798.1

SPIDR-215, Transcript of scaffold protein involved in DNA repair, human

TSL 3

Gene SPIDR, Length 647 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SPIDR-215	ENST00000521798	RABL2A	Q9UBK7	228 aa	Predicted RBP	6.26	□□□□□ -1.41
SPIDR-215	ENST00000521798	MRPS7	Q9Y2R9	242 aa	Known RBP	6.26	□□□□□ -1.41
SPIDR-215	ENST00000521798	ACOT9	Q9Y305	439 aa		6.26	□□□□□ -1.41
SPIDR-215	ENST00000521798	EXOC1L	A0A1B0GW35	172 aa		6.25	□□□□□ -1.41
SPIDR-215	ENST00000521798		A0A1B0GX78	115 aa		6.25	□□□□□ -1.41
SPIDR-215	ENST00000521798	TRIM49D1	C9J1S8	452 aa		6.25	□□□□□ -1.41
SPIDR-215	ENST00000521798	P2RX6	O15547	441 aa		6.25	□□□□□ -1.41
SPIDR-215	ENST00000521798	LCMT2	O60294	686 aa	Known RBP	6.25	□□□□□ -1.41
SPIDR-215	ENST00000521798	TBX19	O60806	448 aa		6.25	□□□□□ -1.41
SPIDR-215	ENST00000521798	TSC22D2	O75157	780 aa		6.25	□□□□□ -1.41
SPIDR-215	ENST00000521798	KLHL2	O95198	593 aa		6.25	□□□□□ -1.41
SPIDR-215	ENST00000521798	SHBG	P04278	402 aa		6.25	□□□□□ -1.41
SPIDR-215	ENST00000521798	KLK3	P07288	261 aa	Predicted RBP	6.25	□□□□□ -1.41
SPIDR-215	ENST00000521798	HBQ1	P09105	142 aa		6.25	□□□□□ -1.41
SPIDR-215	ENST00000521798	RRAS	P10301	218 aa		6.25	□□□□□ -1.41
SPIDR-215	ENST00000521798	PSG1	P11464	419 aa		6.25	□□□□□ -1.41
SPIDR-215	ENST00000521798	TNNI3	P19429	210 aa		6.25	□□□□□ -1.41
SPIDR-215	ENST00000521798	PTPN4	P29074	926 aa		6.25	□□□□□ -1.41
SPIDR-215	ENST00000521798	GDF5	P43026	501 aa		6.25	□□□□□ -1.41
SPIDR-215	ENST00000521798	PCYT1A	P49585	367 aa		6.25	□□□□□ -1.41
SPIDR-215	ENST00000521798	SERPINB9	P50453	376 aa		6.25	□□□□□ -1.41
SPIDR-215	ENST00000521798	DCD	P81605	110 aa	Known RBP	6.25	□□□□□ -1.41
SPIDR-215	ENST00000521798	CDC20	Q12834	499 aa		6.25	□□□□□ -1.41
SPIDR-215	ENST00000521798	FHL2	Q14192	279 aa		6.25	□□□□□ -1.41
SPIDR-215	ENST00000521798	HERC3	Q15034	1050 aa		6.25	□□□□□ -1.41
SPIDR-215	ENST00000521798	HKDC1	Q2TB90	917 aa		6.25	□□□□□ -1.41
SPIDR-215	ENST00000521798	NKAIN1	Q4KMZ8	207 aa		6.25	□□□□□ -1.41
SPIDR-215	ENST00000521798	FBXO48	Q5FWF7	155 aa		6.25	□□□□□ -1.41
SPIDR-215	ENST00000521798	CDKL4	Q5MAI5	379 aa		6.25	□□□□□ -1.41
SPIDR-215	ENST00000521798	DCAF10	Q5QP82	559 aa		6.25	□□□□□ -1.41
SPIDR-215	ENST00000521798	ATP1A1-AS1	Q5TC04	95 aa		6.25	□□□□□ -1.41
SPIDR-215	ENST00000521798	PXDC1	Q5TGL8	231 aa		6.25	□□□□□ -1.41
SPIDR-215	ENST00000521798	COX15	Q7KZN9	410 aa		6.25	□□□□□ -1.41
SPIDR-215	ENST00000521798	VN1R4	Q7Z5H5	301 aa		6.25	□□□□□ -1.41
SPIDR-215	ENST00000521798	THOC6	Q86W42	341 aa	Known RBP	6.25	□□□□□ -1.41
SPIDR-215	ENST00000521798	SLC43A2	Q8N370	569 aa		6.25	□□□□□ -1.41
SPIDR-215	ENST00000521798	ZCCHC7	Q8N3Z6	543 aa	Known RBP	6.25	□□□□□ -1.41
SPIDR-215	ENST00000521798	CSNK1A1L	Q8N752	337 aa		6.25	□□□□□ -1.41
SPIDR-215	ENST00000521798	RHEBL1	Q8TAI7	183 aa		6.25	□□□□□ -1.41
SPIDR-215	ENST00000521798	STAG3L4	Q8TBR4	150 aa		6.25	□□□□□ -1.41
SPIDR-215	ENST00000521798	ZNF473	Q8WTR7	871 aa	Known RBP	6.25	□□□□□ -1.41
SPIDR-215	ENST00000521798	ZDHHC19	Q8WVZ1	309 aa	Predicted RBP	6.25	□□□□□ -1.41
SPIDR-215	ENST00000521798	METTL21A	Q8WXB1	218 aa		6.25	□□□□□ -1.41
SPIDR-215	ENST00000521798	NEIL2	Q969S2	332 aa		6.25	□□□□□ -1.41
SPIDR-215	ENST00000521798	NCLN	Q969V3	563 aa		6.25	□□□□□ -1.41
SPIDR-215	ENST00000521798	MRPL53	Q96EL3	112 aa	Known RBP	6.25	□□□□□ -1.41
SPIDR-215	ENST00000521798	SLC47A1	Q96FL8	570 aa		6.25	□□□□□ -1.41
SPIDR-215	ENST00000521798	THOC3	Q96J01	351 aa	Known RBP	6.25	□□□□□ -1.41
SPIDR-215	ENST00000521798	MAGED4	Q96JG8	741 aa		6.25	□□□□□ -1.41
SPIDR-215	ENST00000521798	C10orf90	Q96M02	699 aa		6.25	□□□□□ -1.41
SPIDR-215	ENST00000521798	SF3B5	Q9BWJ5	86 aa	Known RBP	6.25	□□□□□ -1.41
SPIDR-215	ENST00000521798	NLN	Q9BYT8	704 aa		6.25	□□□□□ -1.41
SPIDR-215	ENST00000521798	SLC7A5P2	Q9GIP4	190 aa		6.25	□□□□□ -1.41
SPIDR-215	ENST00000521798	SPNS1	Q9H2V7	528 aa		6.25	□□□□□ -1.41
SPIDR-215	ENST00000521798	FKRP	Q9H9S5	495 aa		6.25	□□□□□ -1.41
SPIDR-215	ENST00000521798	NMRAL1	Q9HBL8	299 aa		6.25	□□□□□ -1.41
SPIDR-215	ENST00000521798	CUTC	Q9NTM9	273 aa		6.25	□□□□□ -1.41
SPIDR-215	ENST00000521798	TXLNG	Q9NUQ3	528 aa		6.25	□□□□□ -1.41
SPIDR-215	ENST00000521798	PTBP2	Q9UKA9	531 aa	Known RBP	6.25	□□□□□ -1.41
SPIDR-215	ENST00000521798	SLC22A14	Q9Y267	594 aa		6.25	□□□□□ -1.41
SPIDR-215	ENST00000521798	FARSA	Q9Y285	508 aa	Known RBP	6.25	□□□□□ -1.41
SPIDR-215	ENST00000521798	MYRF	Q9Y2G1	1151 aa		6.25	□□□□□ -1.41
SPIDR-215	ENST00000521798	MAB21L2	Q9Y586	359 aa		6.25	□□□□□ -1.41
SPIDR-215	ENST00000521798	ETV7	Q9Y603	341 aa		6.25	□□□□□ -1.41
SPIDR-215	ENST00000521798		V9GYY5	206 aa	Predicted RBP	6.25	□□□□□ -1.41
SPIDR-215	ENST00000521798	MDC1	Q14676	2089 aa	Known RBP	6.25	□□□□□ -1.41
SPIDR-215	ENST00000521798	ZNF462	Q96JM2	2506 aa		6.25	□□□□□ -1.41
SPIDR-215	ENST00000521798	KCNE1B	A0A087WTH5	132 aa		6.24	□□□□□ -1.41
SPIDR-215	ENST00000521798	TRBV5-5	A0A0J9YX44	114 aa		6.24	□□□□□ -1.41
SPIDR-215	ENST00000521798	ATP6AP2	A0A1C7CYW4	349 aa		6.24	□□□□□ -1.41
SPIDR-215	ENST00000521798	ANKRD30BL	A7E2S9	258 aa		6.24	□□□□□ -1.41
SPIDR-215	ENST00000521798	OVOL3	O00110	214 aa		6.24	□□□□□ -1.41
SPIDR-215	ENST00000521798	SYNGR3	O43761	229 aa		6.24	□□□□□ -1.41
SPIDR-215	ENST00000521798	GPRIN2	O60269	458 aa		6.24	□□□□□ -1.41
SPIDR-215	ENST00000521798	STK16	O75716	305 aa		6.24	□□□□□ -1.41
SPIDR-215	ENST00000521798	KLF7	O75840	302 aa	Predicted RBP	6.24	□□□□□ -1.41
SPIDR-215	ENST00000521798	MFN2	O95140	757 aa		6.24	□□□□□ -1.41
SPIDR-215	ENST00000521798	NUDT3	O95989	172 aa		6.24	□□□□□ -1.41
SPIDR-215	ENST00000521798	STATH	P02808	62 aa		6.24	□□□□□ -1.41
SPIDR-215	ENST00000521798	SNRPA	P09012	282 aa	Known RBP	6.24	□□□□□ -1.41
SPIDR-215	ENST00000521798	PRKAR1A	P10644	381 aa		6.24	□□□□□ -1.41
SPIDR-215	ENST00000521798	SFTPC	P11686	197 aa		6.24	□□□□□ -1.41
SPIDR-215	ENST00000521798	EFNA1	P20827	205 aa	Predicted RBP	6.24	□□□□□ -1.41
SPIDR-215	ENST00000521798	DRD5	P21918	477 aa		6.24	□□□□□ -1.41
SPIDR-215	ENST00000521798	SLC6A8	P48029	635 aa		6.24	□□□□□ -1.41
SPIDR-215	ENST00000521798	CCR8	P51685	355 aa		6.24	□□□□□ -1.41
SPIDR-215	ENST00000521798	CDH11	P55287	796 aa		6.24	□□□□□ -1.41
SPIDR-215	ENST00000521798	RPS15A	P62244	130 aa	Known RBP	6.24	□□□□□ -1.41
SPIDR-215	ENST00000521798	RPS15	P62841	145 aa	Known RBP	6.24	□□□□□ -1.41
SPIDR-215	ENST00000521798	SSBP2	P81877	361 aa	Predicted RBP	6.24	□□□□□ -1.41
SPIDR-215	ENST00000521798	REEP5	Q00765	189 aa		6.24	□□□□□ -1.41
SPIDR-215	ENST00000521798	GPR50	Q13585	617 aa		6.24	□□□□□ -1.41
SPIDR-215	ENST00000521798	NCF4	Q15080	339 aa		6.24	□□□□□ -1.41
SPIDR-215	ENST00000521798	FAM83E	Q2M2I3	478 aa		6.24	□□□□□ -1.41
SPIDR-215	ENST00000521798	ADPRM	Q3LIE5	342 aa		6.24	□□□□□ -1.41
SPIDR-215	ENST00000521798	LINC00303	Q3SY05	128 aa		6.24	□□□□□ -1.41
SPIDR-215	ENST00000521798	ZNF260	Q3ZCT1	412 aa		6.24	□□□□□ -1.41
SPIDR-215	ENST00000521798	GPAT3	Q53EU6	434 aa		6.24	□□□□□ -1.41
SPIDR-215	ENST00000521798	AGK	Q53H12	422 aa		6.24	□□□□□ -1.41
SPIDR-215	ENST00000521798	TECRL	Q5HYJ1	363 aa		6.24	□□□□□ -1.41

Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms